Array 1 1003-5 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRZW01000019.1 Enterococcus asini strain AF13-3-H AF13-3-H.Scaf19, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1002 36 100.0 30 .................................... CAATGCCGGCACAAGTGCCAATGGCAATCT 936 36 100.0 30 .................................... GGCTGGCATTAAGGCTGGCGCCATTGCGGC 870 36 100.0 30 .................................... TTACTCTCGGATTGGCCGCCGGAACCGTAC 804 36 100.0 30 .................................... AACTGTCCACTCTACGTGAGTGCTTACTCT 738 36 100.0 30 .................................... TTGTGTAGCAGATTAAACTCCAGAAAGGTT 672 36 100.0 30 .................................... ACGCTAACCTTTCTAGTCCGTTGGGCGCTG 606 36 100.0 30 .................................... ATTTTAGTTAAGTGGTTGTAAAATCTGACC 540 36 100.0 30 .................................... GTAATTAACGGCATGACAAATGCTTACTCT 474 36 100.0 31 .................................... AAAATTGCCGGTTGGTTAGTATGATGAATAT 407 36 100.0 30 .................................... AAGATATGGGTCTTCGTCCGTTGTATGACC 341 36 100.0 30 .................................... TTAGCTGTTTTTAACGGCTCCATTTGGTTT 275 36 100.0 30 .................................... AGCCAAGGGGTGGTACACTGGAGCCATCGA 209 36 100.0 30 .................................... ATTCGCCATAGCGCCCCGCATTGCTTTGAG 143 36 100.0 30 .................................... GAGGGCGAGGACTACATCGAGCTATCTCGT 77 36 97.2 1 ...................................G T Deletion [41] 40 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 16 36 99.8 28 GTTTTTGTACTCTCAAGAAATCAGTAATGGTAAAAC # Left flank : TTGGTTATGGATAAAAAATCCCAAGGCGTTTATGAGCCAACCTATATTGATAAAATTCACTCAGCGCTTAAGGAAAATTTGTGAAGACACAGGCTTGCTACATGTCTTTATTCTAAGCGATGAATGCCTTGAAATCACCTATAATCAAGAGGATCTTAGCAATACGGTTTTAGTTTATCAGAATCAAAACCAACAGCTTCCCGATTTTGAGACATTCGTCAATTCCCTTGAACGCTATTATCCAGATCGGTTTGTTTTTAAACAAGCAGAGTTGCTCAAGTCCTTATATCGAATCTTTCCCTATATTGGACGAGAATCCCAATTTGAAATCTATCTAAATCCAAAAGATATGATATTATTAAAAGTAGTCAGTAAACTTTTAGAGGCAAATTGTGAGCCAAAATATCCGGATTTAGAAGTTCATTTGACGAATTTGGAGAAGAAATTTCTTCAAAACGAGTAAAAAGACGAAAATTTCGAACTGGAGACGTCCATTTGAG # Right flank : CGTGT # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.18, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGAAATCAGTAATGGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [3.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 1 7660-7959 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRZW01000018.1 Enterococcus asini strain AF13-3-H AF13-3-H.Scaf18, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 7660 36 97.2 30 ......................A............. CCTTTGCGCGAATGGCGCGCTGAAGAACTA 7726 36 97.2 30 ......................A............. GTTTGGTTTCGTCGAACATTGGATAAACTA 7792 36 100.0 30 .................................... GTTGGCAATTAGTGACATACAAAAAGCCAG 7858 36 100.0 30 .................................... CGACACGGACCCATTGGTAAACTATTTCTC 7924 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 5 36 98.9 30 GTTTTACCATTACTGATTTCTTGAGAGTACAAAAAC # Left flank : ACTTCTCCAACTCTTTTAAAACAGATACCATTCGATTGGCATAGCGGGGAAATGAGATTTGTTCATCATTTGGATTCTCATAGATAATCCGAATCCACCCTTTTCGCTCAAGCTCCCTTAGCACACTTTGCGCTAATGCCCGGTGAGTTTTGACTTCTACCGACTCCTCTTCCTCGATATTCATCGGCAAAATTCCTGTTTCCAAGAAGTAGTTTTGCAAAGTCTCGACAACCTGCTCCCTAGAAACAAAAATCAATCCTCTCATTAAATCATCAAGCATAAAAAGCACTTCCAAATAAAGCGTTTTGTGTTTTGAAGTGAGAATCTTAAAAAAATCATCCGGTATCATTGAAAATAGATTCATTTTTTCTCCTCTCTGAAGTAAGCGCATTCATTTCGCTTGAAATGTAAAGCCCCAGCTTGATTTTTGTTGGGGGATGGTTTTAGGATGTTGGATCAATATATATCATACTTTAGAACACCTTAAGGAAATGATTGGG # Right flank : CAAGCA # Questionable array : NO Score: 3.01 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTACCATTACTGATTTCTTGAGAGTACAAAAAC # Alternate repeat : GTTTTACCATTACTGATTTCTTAAGAGTACAAAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //