Array 1 87510-85706 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSUR01000003.1 Ligilactobacillus salivarius strain FWXBH2_2 scaffold3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================== ================== 87509 36 100.0 30 .................................... GGAACCCGGCGGTAAAAGACGTCGAAGCGA 87443 36 100.0 30 .................................... ATCCGATCAGTAACTTTAACAAAGTTGATT 87377 36 100.0 30 .................................... AGGTTTCTTGATTGATACTGATACATAAGC 87311 36 100.0 30 .................................... GCTTGTTTCCAGTATAAGCAGGTACTATAT 87245 36 100.0 30 .................................... ACCGTTAACGCTAGTGATTGTTAGCTTTGG 87179 36 100.0 30 .................................... ATTGTGTAATGTAATTTATGCAGCAGCTTA 87113 36 100.0 30 .................................... TTGGACTTTGATAGGTTTGTCTGTACTAGG 87047 36 100.0 30 .................................... AAGCATGTTAACAACTAAGCTTGTGATAAG 86981 36 100.0 30 .................................... AAAACGACGTGTTGATATTGCGCGTGCCTT 86915 36 100.0 30 .................................... TATGAATTGGACAAATGTATTAGATTATAT 86849 36 100.0 30 .................................... CAATCTTGTGTATATCTTTCACGACGCTTA 86783 36 100.0 30 .................................... AATTCACGGCTTCCAACTTGTCGACCTTAT 86717 36 100.0 30 .................................... AATCTTTTATACCAATATTCGTCAGAATGT 86651 36 100.0 30 .................................... ATTTCACATGCTGCTGTACCCCACTCAAGA 86585 36 100.0 30 .................................... TAAGGGGGCTATTAATACAGACGTTAATAG 86519 36 100.0 30 .................................... ATCATACAAACCAACACCATTACTATCTAC 86453 36 100.0 30 .................................... TTAATATGTTTAAAAGGGACCGGTTTTCCT 86387 36 100.0 30 .................................... TTAGTCATACCTATTATCACCAACACCGGT 86321 36 100.0 30 .................................... TTAGAATTGTCATCACAATGCGGCCAAGTA 86255 36 100.0 30 .................................... GAACCATTTACTTCATACGTGATGTTGGCG 86189 36 100.0 30 .................................... TATCTAATGTATTTTATGGATCACGTCAAA 86123 36 100.0 30 .................................... TTGCTGTCTTACACCTATGTCAATTCAACT 86057 36 100.0 30 .................................... AAGTTCACACGAAAAGCCCTATGACAATAC 85991 36 86.1 29 ..........T.........T...A......G.C.. ATCTGCGTTCAGTTGGTGTCTCAATGCTC T [85957] 85925 36 94.4 82 ........................A..A........ ACAACTGGAGTTTGAGTACGTTTAGCTTGTGTTTCAGAAGTATGTTAAAAACCTATTATATGTTATAATATGAAAGTGTTTA 85807 36 83.3 30 .....G....T.........T.........G.T..T AGTAATTCACCGCTAGTTAAGTGGTTTTTT 85741 36 80.6 0 ..........A.........T...AG...CG..G.. | ========== ====== ====== ====== ==================================== ================================================================================== ================== 27 36 97.9 32 GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Left flank : AACAGACCGAATTAGTAAAAAGTATATGAATGTATTAATTAAGAAGATTATTGAAGACATCACAGACGATGAAAGACAAGCAATACTAAAATCAGTAAATAGTTTGTATGATCGTATTCGAGAGGTTTTGTATAAAATTGATATACCATTACAAGTAGATTATGACAATGATTTAACAAGACTATTTAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAAATTGCATGTGGAACTAAATAGAGAAAGAATTATAGGTCTAACCAATGTCGCACATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTAGGTCTTGTTAAGGCGACTAACTCATCAATGTTTATAATTGAATTCACAGAAAAGAATGGTCAGAGATTCTTTGAAAGCTGTGATAATTACTACATTGATGAGGATTATATTGATTGGTACTAACGAATCGTTAAATTTTGATTATAAAGTAACG # Right flank : TAAAATACAAAAAATATTTCATAATATTTATAAATCTATCAGAAATTTTCTGGTAGATTTTTTTAGTGTAAAAATTTTTGAGTTTAAGATATATTATGGTTGATAATGTAATATTATATGATATATAATATAGTTGAAGATGAGATATAAAAGAAAGTGAGGGATGATGATGAAAATTCAAGTTAGTTCTGATTTACTAGATGGTTTAGTATTAGCGCTTTTAGATAAGCAAGATTATTATGGATACTCATTGACACAGGATATGCAAAGAGCAATTTCAATTTCAGAATCAACACTCTACCCAGTATTACGAAGGTTAAAGAATAATGGTTTATTAGAAACATATGATCAATCATATCAAGGGAGAAATCGTAGATATTATCGCATAACAAATAGTGGGGAAGAACATTTAGGAAGAGTTAAAAAAATGTGGAGCGACTACAAAGTTAGTTTAGATTCAATTTTCGAAAAAAACTAGGGAGGGGGAATAATAATGAACT # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.13, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [21-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //