Array 1 182196-178924 **** Predicted by CRISPRDetect 2.4 *** >NZ_UCRP02000048.1 Acinetobacter baumannii strain J4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 182195 30 96.7 30 ............................A. TTAAGCCATTTTCTTTTGTGAATCCTAAAG 182135 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 182075 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 182015 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 181955 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 181895 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 181835 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 181775 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 181715 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 181655 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 181595 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 181535 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 181475 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 181415 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 181355 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 181295 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 181235 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 181175 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 181115 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 181055 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 180995 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 180935 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 180875 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 180815 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 180755 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 180695 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 180635 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 180575 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 180515 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 180455 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 180395 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 180335 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 180275 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 180215 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 180155 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 180095 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 180035 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 179975 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 179914 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 179854 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 179794 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 179734 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 179674 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 179614 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 179554 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 179494 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 179433 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 179373 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 179313 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 179253 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 179193 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 179133 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 179073 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 179013 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 178953 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 55 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.33 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //