Array 1 163831-171763 **** Predicted by CRISPRDetect 2.4 *** >NZ_QNSB01000004.1 Brevibacterium celere strain 3b_TX Ga0227255_104, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 163831 29 96.6 32 ............................G ACGGCGATCAATGCCGTCTGGAATTTCATTAA 163892 29 96.6 32 ............................G ATGATCCCGCCGTAGGTCTCCCGCTCGATGGG 163953 29 96.6 32 ............................G GTCACGATCTACCCGGCCGAGTCGGGTGAGAA 164014 29 96.6 32 ............................G TCACTCATCGCACTCGCGGCAGACGTCCCGGA 164075 29 100.0 32 ............................. ATCCCCGCTGGCAGGGTGATTACACGAGTGAC 164136 29 96.6 32 ............................T TGTCGACCTGTCCGTTTGCCCATACGCTGCCG 164197 29 96.6 32 ............................G CCGAGTACCGAAGTCGGTCTATAGAGGCGTAT 164258 29 100.0 32 ............................. TCCAAGTCAATGCCGGTGGGCGTGGTGATCGT 164319 29 100.0 32 ............................. GCCATCGCCATGCTGATCTCGTGCGGGGTGAG 164380 29 96.6 32 ............................G AGTAGAACATCGGCACGGCACCGAACGGGCCG 164441 29 100.0 32 ............................. AACTAGGGTGGCTGCGGAGGCGATGAGGGCTC 164502 29 96.6 32 ............................T CCAGAACTCGTCACCCTGAGCGAAGTCGATCG 164563 29 96.6 32 ............................G TTGATCGCCGCCACCAGAATCGTGCCCACGAT 164624 29 100.0 32 ............................. CTTGTCTGATGCTGCCCGATGGTGGCAGGCCA 164685 29 96.6 32 ............................G CAGGTGTTCGTTTTCACGCTCGGTGGTCTCGC 164746 29 100.0 32 ............................. CGGGTGTAGACGTACACCAAGCCCCCGTGGTG 164807 29 96.6 32 ............................T GCCTCCGCTGACGACATTCAGCTCGCGAAAGA 164868 29 96.6 32 ............................G AACCGCCACGGTGCTACGAGGGAAGTGGATTT 164929 29 96.6 32 ............................G TCCTGGTATCAGCGGGAGAAGTCCAAGGCCGT 164990 29 96.6 32 ............................G GACGCAATGAACAACCTCACCGACGACGATCA 165051 29 100.0 32 ............................. TCGCGGCATTTGCGTTGCACGTACTCGGCGAT 165112 29 100.0 32 ............................. CGTGGGTGGATGAAGTCGACGTGGTGGACCCG 165173 29 100.0 32 ............................. CCTGGCGGGGTGCACGCCGCGGAGAAGCTGAT 165234 29 100.0 32 ............................. ACCACATCTCCGCGATGACCTGCTTGTCTCGC 165295 29 100.0 32 ............................. AGAAACGGCAACGCCAAATCGAACGAATCGAG 165356 29 100.0 32 ............................. ATCCTTTGCCACGTCGTCCCCAGATTCTTCGG 165417 29 96.6 32 ............................G CACAAGCCCATGGAGGTGACGGGGTGACACGA 165478 29 96.6 32 ............................G CGATCCCGTGAGCTATTGCTAGCAACGGAATG 165539 29 100.0 32 ............................. TGTCGGCTCAACGGCGGAAAGTGGAGAAGCGG 165600 29 100.0 32 ............................. TGATGGTAGTTCACCCCGTCACCTCCATCGGC 165661 29 96.6 32 ............................G TACGCGATCCAATGCCAGTGGGAAATGTGGGT 165722 29 100.0 32 ............................. CGCTCGACACCGGGCCCGCATTCGATGCCGAC 165783 29 100.0 32 ............................. GAACCCACCACCACCACACAGGAGCACAGCAG 165844 29 100.0 32 ............................. TGCCACTCGACGACCGTGAATACGGGGTGCTC 165905 29 100.0 32 ............................. GATTCTCGCCCGACTGCTTGTCCTGCCACTGC 165966 29 96.6 32 ............................T AGTTCTGTGCCATCCACATGTTCTCGAGCATG 166027 29 96.6 32 ............................G AAAAGCCTCGAAGAATACCGAGCAAACATGAT 166088 29 100.0 32 ............................. TCGCAACGCGTGTTGGAGCATCCAACGAATCG 166149 29 96.6 32 ............................G CGGCGTGCCTTGCTGGTGTCCGGTCCATGCAG 166210 29 96.6 32 ............................G CACGGCGATGAGGGCGTTGAGCCGTCCCCCTA 166271 29 100.0 32 ............................. TGGCCGCGCTTGAGTTCGGTGGCGATAGTCTG 166332 29 96.6 32 ............................G GGCTACGGGTCCGGGTGCCGGAACGTCAGGGT 166393 29 100.0 32 ............................. CGCGTACTGAGTCGCGTCCGGGTCGATATCGA 166454 29 96.6 32 ............................G CACCACTGGGTCACAGTGGAACTGGACAGGCA 166515 29 100.0 32 ............................. TCCACGGCGAGGGGCGTCTCCCGTCGACGTTC 166576 29 96.6 32 ............................G TGGCGCGCGAACGATCGCGCGATCCGCCGCGC 166637 29 96.6 32 ............................G TCGAAGCCGCCGAGCGACTCGGAGTAAGCCTC 166698 29 96.6 32 ............................G TTCTGACCCACCCACCCGCGCACCACCTCACC 166759 29 100.0 32 ............................. GTCACCTGGTCCTTCTCGCAGTCCCATTTCTC 166820 29 96.6 32 ............................G GGTCTCCCGGCTGGACCTCGGGATCTGTGTAC 166881 29 100.0 32 ............................. GCCTTGATCGCCTCCACACGCCCGTGCTCGGG 166942 29 96.6 32 ............................G CGCGTCGCCCAGAACGTCCACGACCTCAGCGT 167003 29 96.6 32 ............................T GGTTCGTCGCGACCCGGACCTCGACGCCCGGG 167064 29 96.6 32 ............................G ATGGACATTGTTACCAGACTGTGACCTTGGGC 167125 29 100.0 32 ............................. AGCCCCTTGCCGATGCGGGGATCAGTCTCGGG 167186 29 96.6 32 ............................G GTGACGATCTACCCGGCCGAGTCGGGTGAGAA 167247 29 100.0 33 ............................. CCCCCACCGAAGCCCACGCCATCCTCGAAGACC 167309 29 100.0 32 ............................. GTGCCGCGCTCGCGGGCTGCGTGAGTCCGTGG 167370 29 100.0 32 ............................. ACCTACGACGCCGCGGACCCCGCGCACCGGAA 167431 29 96.6 32 ............................G ACCGCGGGCCACCGTTCCGCGAACGGGATCAA 167492 29 100.0 32 ............................. AGCAGCAGATAGTCGGCGAGCGCGGGTCGGAC 167553 29 96.6 32 ............................G AGCCCTGCTGAAGAGCTCCCCACCCATCAGAC 167614 29 96.6 32 ............................G CCAAAACAGCCGACGTGGAGTTCAAGCACCGA 167675 29 100.0 32 ............................. CCGCCGATCAGATCTCGCTCGGTCAGGTGCTC 167736 29 100.0 32 ............................. AACCCGCACCCACCATGCCTCAACTGCTATCA 167797 29 96.6 32 ............................G CCCATGCTCATCACCGATTCGTCGTGGTCCAG 167858 29 96.6 32 ............................G TTGTGAGGATACTCGCCGGTAACATCGGGCAG 167919 29 96.6 32 ............................T GGGCGGACGAGCTGTGGGTCACCCCGCAGACA 167980 29 100.0 32 ............................. AGCCCATCCCAGCGGACGATGAGCGCACCATG 168041 29 96.6 32 ............................G GGTGGGGTGCGACGTTCGTCAAGCACACCGGC 168102 29 100.0 32 ............................. AGGGGAATCTCCTCATCCGTGAGGTCGTTGCG 168163 29 96.6 32 ............................G TCCCGCTACTTCGGGCAGATCGCCCCGTCGAT 168224 29 100.0 32 ............................. TGGGAGACCCTCGACGATCCCGCCTACGTCAT 168285 29 96.6 32 ............................G GTCGTCGCCCGTCTCGACGGGGAAGTGGTCAG 168346 29 96.6 32 ............................G GCGGCTGCTGCTGAGTCGGCGGCGAAAGCCCA 168407 29 96.6 32 ............................G CGTCGTGGGCGCCCGTGGGTCTCACCCACTCA 168468 29 100.0 32 ............................. CCCGGAGACCTGGTGTTCGACCCCTTCGGAGG 168529 29 96.6 32 ............................T GGTGGCTCAACGAAACCGCCTGGATACTCATC 168590 29 100.0 32 ............................. TGCCCGATGTCGTGGTCACACTCAGTGAGCGT 168651 29 100.0 32 ............................. GTCGGTGACGATTCATGGAAGGACAGCGATCA 168712 29 96.6 32 ............................T GCTCGGCCGCGGTTGGTTCGGGCGGTGCGGGG 168773 29 96.6 32 ............................T CCGGGCGGGTCGCCGCCTACTCAACGAATGCA 168834 29 100.0 32 ............................. TCACCCACCGACTCGGCTTCCACGGCCATGTC 168895 29 96.6 32 ............................G CTGCAGCGTTCCACGGTGACGTTGCGGGTGTG 168956 29 96.6 32 .................T........... CCATCCGTCACGGGTGGGATCATGGTGCCCAC 169017 29 96.6 32 ............................T CGGCGTTCCAGCGGTACCAGCGGCCAGCGAGG 169078 29 96.6 32 ............................G GGTTACGCCGACGAACCGGTGACCAAGACCGT 169139 29 100.0 32 ............................. ACGAACTCCCCGAACGCGGCCACCGACAACGA 169200 29 96.6 32 ............................T CAGTGCCATCCCACACCGAGAGGAGGTTCCTC 169261 29 96.6 32 ............................G AAGAACCTCCAGGAGGACGCGAGGAAGTCTCG 169322 29 100.0 32 ............................. CCGCCAGCTCGTCCACGACCTCGAGGCCGACG 169383 29 100.0 32 ............................. ACGGCAAGCCACCCCGCGATGCTCGCGAGACG 169444 29 100.0 32 ............................. GCTTCCGGGCGATCCGACTTCGCAGGAGTGAA 169505 29 96.6 32 ............................T GCTACGTATCCACGGAACCAAACCCTGCAGGG 169566 29 100.0 32 ............................. CCATCCGTCACGGGTGGGAGCATGGTGCCCAC 169627 29 100.0 32 ............................. ACGTCGCGCGGGGTGTCGTGCTTGTTGACGCC 169688 29 96.6 32 ............................G TTCTTCCGCAGGTCCTGCTCGTCACCCTTGAT 169749 29 100.0 32 ............................. TGCGGCGACACCCAACGCGACGACGCCGGCCG 169810 29 96.6 32 ............................A CGTTGCATTTCCGCTTCCGCGACCGTGAGGGT 169871 29 100.0 32 ............................. TCTGGCATCCACTTATCGAAGAACCGTTGCTC 169932 29 96.6 32 ............................T GTTCAATCACATATTGATAATTGAATGTTCAA 169993 29 96.6 32 ....................A........ AGGTAGCCGAGAGGGTGAGTCGCGGTCGCCTT 170054 29 96.6 32 ............................G GCGGTCGGGTTCTTCTCGCTCGAGATGGACGA 170115 29 96.6 33 ...............T............. GTCACGGGCATCACCCAGCAGGCGCGCATCACG 170177 29 96.6 32 ............................G TTCGTCCGCACCGTCTGGTCGGCGAGGTCCGT 170238 29 100.0 32 ............................. TGACTGCATCGTCGAGAAGCGCTCGCAGATCG 170299 29 96.6 32 ............................G CACTCCGCTGGCTCGACGAGCACCCAGACAAG 170360 29 96.6 32 ............................G ATCTCGAGGTGGGACTTGGGCACCTGATGGGG 170421 29 96.6 32 ............................G CGTGCTGAGATCACCGACGCGAAGGAGCGGAA 170482 29 96.6 33 ............................G TCGATGAGCTGGCGGGCCGCGATCCGCTCCACC 170544 29 96.6 32 .............G............... GTCTGCCACGGCCCGTCCGTCGCTGCGGCGTG 170605 29 93.1 32 .............G..............G GACGGCGAGGAGTGGATCGACGGCACCGCCAC 170666 29 96.6 32 .............G............... AAGCAGAAGTCGTGGATCTCAGTGCGCAGATG 170727 29 96.6 32 .............G............... TCGGTGGCCCCGTTCTTCCGCACCACCTGCTT 170788 29 96.6 32 .............G............... TCGCCAGCCGTCGCCCAGATGGGTATGTTGTC 170849 29 96.6 32 .............G............... TCACTGAGAAGCGCCGCAACGGTGAGATCAAG 170910 29 93.1 32 .............G..............G TGTACCACGATCACCGATAGTTTGAACCTGTG 170971 29 93.1 32 .............G..............G TGTACCACGATCACCGATAGTTTGAACCTGTG 171032 29 93.1 32 .............G..............G CAGATGCACACCGAGGCGAAAGTCGCATATCG 171093 29 93.1 32 .............G..............G TGGATCGACATTCCCAGCGAGCAACGCGATCG 171154 29 93.1 32 .............G..............G ACCGTCATCAATGGGATGAAACGGGCCGCGCG 171215 29 93.1 32 .............G..T............ ATGCGGTCGCCGGTGATGTTGACGTGGATGGG 171276 29 96.6 32 .............G............... TCACCGCCCCCCGCCGAGCCGCAGCCTACGAC 171337 29 96.6 32 .............G............... ACGATCCCCTGTGGTCCAACGGAAAGACGCTC 171398 29 93.1 32 .............G..............G CCCAGACCATGCACGTCTGCCCGCTGCAGTTC 171459 29 96.6 32 .............G............... GGGCGCGGGTCGTACCAGAAAGGGTTTGGTGG 171520 29 96.6 32 .............G............... ACGGTTGTAGCTACGATCACGTCGATCGGGGA 171581 29 96.6 32 .............G............... AGACGGCCACGCCGGCGCTCTTGGGGTACTCG 171642 29 93.1 32 .............G..............G AAGTGATACTTCCCCGTCTTGACGATGTTGCT 171703 29 82.8 3 .............G.C.........CG.A ACC Deletion [171735] 171735 28 72.4 0 ..C.........C.-.......G..CGGA | A [171746] ========== ====== ====== ====== ============================= ================================= ================== 131 29 97.3 32 GTGCTCCCCGCCTACGCGGGGATGATCCC # Left flank : CGAGGGCTACCCGCCGCTCATCACCGGCGTCTTCGGCTGGGGCATGATCGGCCTGCTCATCGTCATCGCCATCGTGCTGTCGCTCATCAAGTGGCCGCAGAAGACACTCGACGACACCGACGCCTCCGTCGCGGACTCGGTGCACGAAGAACTCAAAGGAGGTAAGTGATGGAAGCGCCTGCAATCATCATGATGGTCATCGCCATGATCACCGTCTGGGGCGGCCTCGCGGCTGCGATCATGCACCTGCGCAAGCACCCCGACATGGAGTGAGCTGAGCGAGCTCGAACCTCATATTCGTGAGTTCCGGAGATCGAGCTCGACGCGAAGTCAGTCGGAACGGCAGCAGACCGTCCGATCGACCGATTCCACCGAGGCGGGCGCGACATCAGTCGCGCCCGCCTCGCATCGTGTTGTCTGTCGAGCGATCTTCCGATGAGTTCAGAGACAAACTCATCCTCTAGCCTCGACTTCGTTAGAATAGATCCAGGTCAAGTAGT # Right flank : AATGACCTGGTCGCCGAGCTGATTTTCAGACGGGCAGTCGCCTCACCGCGCATCCACCTCGGCGGGGCGATGAAGGCGGCTGTGCCTCTTCGAGTATCCGAAGTAGACGATGAAACCGAGCAGCAGCCAGACGAGGAAGCGGATCCAGGTGTCGAGGTTGAGATTGAGCATGAGGTAGAAGCAGATCACCGCCGAGCCGATCGGCAGCACCGGCACGAACGGCACCTTGAAGGGGCGCGGCAGGTCGGGGCGGGTCTTGCGGAGCACGATGACCCCGATCGAGACGAGGACGAATGCTGACAGCGTGCCGATGTTGACGAGCTCGGCCAGAGTCGACAGCGGCACGAACGTCGCGATCACCGCGATGATGATTCCGGTGATGATCGTGAATCGGTAGGGAGTGCCGAACCTCGGGTTCGTCTTCGCCAGCCAGGTCGGAAGGAGTCCGTCGCGCGCCATGGAGAACCCGACGCGCGTCTGGCCCATGAACAGGATCATGC # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:-0.01, 8:1, 9:0.46, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCCTACGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCATACGCGGGGATGATCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //