Array 1 1024610-1021325 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP010070.1 Candidatus Methanoplasma termitum strain MpT1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================ ================== 1024609 35 100.0 26 ................................... CTTGGGCTCATCCGCGGATTGCTGCC 1024548 35 100.0 26 ................................... GCCAGTTGCTCGCGCGTATATATATT 1024487 35 100.0 26 ................................... AAGAGTTTGAGCGCGAAATGATAACT 1024426 35 100.0 27 ................................... CGCCGTGCCCTGTCCATCACCGAATTT 1024364 35 100.0 26 ................................... GCACAATCAAGCCTCGTATCCATGAC 1024303 35 100.0 26 ................................... GACAAAGAAAGGTTATGGGCGGACTT 1024242 35 100.0 26 ................................... TATCTGGTTAAGATTATGGACGTGTT 1024181 35 100.0 27 ................................... CCCATGCATCAAGGCCGATCTGTTGTG 1024119 35 100.0 26 ................................... TCTGTGAGGTTCGTTAGCTGAGTGAG 1024058 35 100.0 28 ................................... CAGCACCGAACCACCCCCTTTTCTTACA 1023995 35 100.0 27 ................................... CTCCTTACACACCGGGTGTGTATCTTG 1023933 35 100.0 26 ................................... AGTCGATACGCACCGAGAATGGCGTC 1023872 35 100.0 26 ................................... ACTGTCTGAGAAGGAACATTACCTGA 1023811 35 100.0 28 ................................... TATACTGTGATGGCCTTGGTTGCTGTTA 1023748 35 100.0 27 ................................... TTCCAACTTAGGCGTTCCTTCTTATTA 1023686 35 100.0 25 ................................... GTTAAAACTCTGTTGGTGTGTATTT 1023626 35 100.0 27 ................................... GTTGAATTGGGACTACTCGGCGATACT 1023564 35 100.0 26 ................................... CTGCGATCAGAACCAGTATCTTGAGA 1023503 35 100.0 26 ................................... GCCGTTACAAAAGTCCTTGACTACTT 1023442 35 100.0 26 ................................... CTATTTTCCGTACTTGAGGGCGCACT 1023381 35 100.0 25 ................................... ATCCTGCGTTATCCGATACCGTATA 1023321 35 100.0 27 ................................... CGCGCACATTCCGCCCTGGAGCTCCGA 1023259 35 100.0 26 ................................... ATACCCCAATCACAAGGTTCTCATAC 1023198 35 100.0 26 ................................... GATGTGGCAGTTATTTCGTTCACAAA 1023137 35 100.0 27 ................................... CTTACAGCCAGTGAGATTAGTGAACGT 1023075 35 100.0 27 ................................... TCGATACAGGAAGCGAAGGTTATGTTA 1023013 35 100.0 27 ................................... GGAGGACAGGATCTTTCGTTCTCCGTT 1022951 35 100.0 25 ................................... ATCCTCGGATGATCGAAGTTGATCT 1022891 35 100.0 26 ................................... CATGTTCGAGACTTCGAGTATATCTA 1022830 35 100.0 27 ................................... ACGCATAGTATGTGCTTGACACATTAC 1022768 35 100.0 28 ................................... TTACGTCTGGGCAAGTAGTCCATCCCTC 1022705 35 100.0 26 ................................... AGTTAAGCTAATAGCTTAACTGCATT 1022644 35 100.0 26 ................................... GTACCACGCTGTCGGGTGTGCAGTAC 1022583 35 100.0 27 ................................... CGGAAGGTTATTATCCATAACTGTGCC 1022521 35 100.0 27 ................................... GGACGCGGACGCAATCAACGCCGTGTT 1022459 35 100.0 26 ................................... TCCAGCGGGGACGCATGGCGCATTTA 1022398 35 100.0 27 ................................... CTGCTCTTTCATGTTGTTTAATTTGTC 1022336 35 100.0 25 ................................... ATATCGGACTTGTAAAACTGTGGGC 1022276 35 100.0 26 ................................... ATCCACGGCGCAGGCGCAATCTCAGT 1022215 35 100.0 26 ................................... GACCTTCAGGTCGGGATTCAACTCTT 1022154 35 100.0 28 ................................... TCTCTCATCGCATTCAGGGTTATCAGCC 1022091 35 100.0 26 ................................... TCGTTGTTCATTTTATCACCTAAGAC 1022030 35 100.0 26 ................................... CCAATAGATACAACTTTTATCAATCC 1021969 35 100.0 27 ................................... ACGGCCGTTACTAATCAGGTTTCAGCT 1021907 35 100.0 26 ................................... AGTAGAGCCAGACACCCTGAGTGTAC 1021846 35 100.0 26 ................................... CGCCTGAGTATCGGCTGGTTAGGTTT 1021785 35 100.0 27 ................................... TTTCAGAATTTATAGTTTCAACCTTAT 1021723 35 100.0 27 ................................... CCTACAGGTGATAGATATTGCTAACAC 1021661 35 100.0 25 ................................... CCATGAGTCCTGGTGCACAGGTCAC 1021601 35 100.0 25 ................................... AGTTTTTTCTTATTATCTCTAAATT 1021541 35 100.0 26 ................................... AGTATCTATTATACCGCAATGATGGA 1021480 35 100.0 26 ................................... CTTCATAAGATCCTTTTGAACAATTT 1021419 35 100.0 25 ................................... GGATTACAGCCCAGGTCCTGCGCCT 1021359 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ============================ ================== 54 35 100.0 26 ATCTACAAAGAGTAGAGATTCGAATGAGTTTTGAG # Left flank : CGTTGCGGTAGGATGTGACGGTGACTGTCGACGGATAGTTGGCGACATCGGGCGTAGCGGTGAATGATGCGTCGTGATCGAGGGAGAACCATGCCGTCAAGGTGGTGTCGCTCTTGGGAAGGAAGACATAGGTCTTAAGAGTGGACCGCTTGGTATTCCCTTCGAACCATCCGACGAAAGTGTATCCGTTGTTGTTCGGTTCCACAGTCACCGAGAAAAGATCCCCATGTTCCACATGGCCGAACGTGGTGGAGAGGATCCCCGCATCGGGGTAGTTGATCTTAACGGTAATATCATGAGGGCCGGCGTCTCCGTAGTAGTCGGAGTGGATGTAGAGATATCCTGCTGCGCCTATTGCTACGATGATAATGAATGCGATCGCCGCTTTACGTTTGCCGCTCATGTTTTCCCATCCGATATGTTTGAGAATGAATAAGAGAAGAGGATATTAAGAGATTTGTTTTGAGTTTTTTCTCCAAATTGTGCCCTGCCACTAGTGA # Right flank : ACTCATTGTGGGTTTTTGGTCTATTCAGACCCGCTTTTTACATATATGACAACATCAAATAACAATATAACGCTTTTGATTGTACAAATTATTTGAAAACTGACGAAATGAAAAATTAAGACCGGGGTTTGCATCAGACGATTACAATGTCTGATTCCTCATGTATCGCATAACCCATCCTTATCACATCACATGTTTTTGAAAGTTTAATGATTAGTACCGAATCTGCTTCAGAAAATTTGTCCATGAAATTGTTGTTGATATCTGTGATAATATTATCGAGTATTCTTTCAGAATTGTCGATCTCATATACAGAATACTGCAGCCTGTGCCCGAATCTCTTTATGTATTTTGAGAATTTTGTGCGCAGTTTGTCATCCTGGATATCATAACTGATAAGGATCATTCTTCCTCCAAAATCTTGAAGATTGGAAAATCAGAAATTGGTTTATGTTTCATTATTGCACGATAGAAGTCTTGGAAATAAACAAAGATCTGCT # Questionable array : NO Score: 3.08 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.17, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCTACAAAGAGTAGAGATTCGAATGAGTTTTGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.71%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //