Array 1 4779-6933 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNVY01000008.1 Bifidobacterium longum subsp. longum 7-1B seq8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 4779 36 100.0 28 .................................... GAGAGCCGGCGCTCCATCTCCTCGCATC 4843 36 100.0 28 .................................... AACATAATTAGATGTCGCGTTGAGTTCC 4907 36 100.0 29 .................................... TGTCTTGTTGGTCGCAGTCATGGCAATTA 4972 36 100.0 28 .................................... CGGTGCCCGGCAGGTCGTCAACGATCTG 5036 36 100.0 28 .................................... ATGAGTTTCAAAGATATCTTATGGCAGT 5100 36 100.0 28 .................................... GGAACGCCGGAAGGCTGTTCTAGCGGCC 5164 36 100.0 28 .................................... TTCTGTTCGCTTGGCGTCCAGGTGGTGC 5228 36 100.0 28 .................................... AGGTCGAGCGCTTCCCGCCAGCCGGCCT 5292 36 100.0 28 .................................... TAGGAGGAGGTTTGTTATGAGCATTAAT 5356 36 100.0 29 .................................... AACATCCTTCACTTCCATAGTCACAGTAG 5421 36 100.0 28 .................................... TCAGGCAGAGAGTGACGGCCACGGCCAC 5485 36 100.0 28 .................................... TTCCAAGCGGCGATATTGTATTGCAACT 5549 36 100.0 28 .................................... GTTCCGCCCATTGGAATCTACCACCGGT 5613 36 100.0 28 .................................... AGACATCATCACACCATTGCTGACGATT 5677 36 100.0 28 .................................... TTGGCGTCCGTGTTGACGCCGGACACGA 5741 36 100.0 28 .................................... ATTGAAAGGTGGTTTGTGATGGATGGGG 5805 36 100.0 28 .................................... TTCATAATCAACACCTCTCTACCAACAA 5869 36 100.0 28 .................................... TCAACGCATTTGAACCGATAGCGTTTCT 5933 36 100.0 28 .................................... AGCATGGTGCGCACCGCCGTGTCGGTGA 5997 36 100.0 29 .................................... GTAGAGATGGAATCAATATGGCTTCTATG 6062 36 100.0 28 .................................... TTAACGTAAGAAAGGAGCGAGGATGAAC 6126 36 100.0 28 .................................... GTAGGTACGTGGATACGTGGTCATGGGC 6190 36 100.0 29 .................................... CGCCTCGCCGCCGCACGAGAACGAGTCAA 6255 36 100.0 28 .................................... TATGGTGTAGCCAACAACAAAAACAAAC 6319 36 100.0 29 .................................... CCCTTGCGCGTACTGTGCTTGTAGGTGGC 6384 36 100.0 28 .................................... CGGGTAACAAGGTGGACATGCTCATTGA 6448 36 100.0 29 .................................... TGTTGAGGGGAACCGTATCAAACCTGATT 6513 36 100.0 28 .................................... TGGTTTCCGTGCCGCATTGGTCGCAGTA 6577 36 100.0 29 .................................... TCATGGGACTGTGAGCGGCGGCGGCGTGA 6642 36 100.0 28 .................................... TAGAAGTGCAGATTCCGTTCCTGCAAAC 6706 36 100.0 28 .................................... AGGACGTGCAACGCAAGTATTTCAAGAT 6770 36 100.0 28 .................................... TCGTCGATGTGTTCCAAGAGGTTTGGTG 6834 36 100.0 28 .................................... TATTGTTCGGGTGCGATGGTGATGATCA 6898 36 86.1 0 ..............................TTG.AT | ========== ====== ====== ====== ==================================== ============================= ================== 34 36 99.6 28 CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Left flank : ATTCAACGGTTCCGGTTTGACTATACCGAGCTCATTGAATGATTTTGCGCAGCAATTTGGTTTATATTGCGAAGGCAAAATCGACAGGTTGCAGGTTCCCGAATATGTAGGCGAGTCATGAAACGCGATGAGGACAGTGGCGGCATGTGGTGCTTGGTGATGTTTGATTTGCCGGTCAAGACAAAACGGCAACGGCATGCTGCAACTGTCTTTAGAAATATGTTGCTCGACATGGGATATGGAATGGTGCAGTATTCCGTATATGTGCGGTATACGCCTACGCAATCGGGTAATAGGGCGACGGTCAAAATGATTAAAGACAATCTGCCAGCTAATGGCTTAGTTAGAATTTTGCATATTAGCGATCATCAGTGGTCCACGGCGGCCCGATTTTCTTCTGGAAAACGTGAGATTGAGGAAGAAACGCCTGACTTTCTCACGCTTTTTTGAACGTAGGAGAGTCTGAAAAGATTGAAAAATAGCCCTTCTTGATAGGCTAT # Right flank : TGCTGGAATGCTTGGGTTGATTTGGCTGATTTAGCTGTGATGGCCGCTGCGGGAATGGCCCTTGCGCGGTTGGCGGCAGAGGTTGCGGCGCGGATTGCGGCACTGATTGTTGTGCCAATTGCGTCTGCGGTGAAAAATATGGCGACGGCTGTGTCTGACTGTTTATCGGCGGATGTTCCGGCTCAGGTTGTGGCTGGAATGGAGAATATTGCGGTTGCGCCATTGTATGCCCCTGCCCCTTCATTGCCATTTCATTGGCGCATGGCGAGGGCTGAAAACCAAGATGATGAATCCTGCATGAGTTATCCGTGATTCCTGTGCGTTGGTACAGCGCGGAAGGTTGAGCAGCCGACATATGCAGGCTTGTCGGTTCACGCGAATATCTTTAAACCTATGACTTCCAATACCCTTCGTATGTCAACCATGTTCCTGCGCACCCTGCGCGAGGACCCCGCTGATGCCGATGTCGATTCGGCCAAGCTGCTGCAGCGCGCCGGCTA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //