Array 1 1705163-1706531 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP020452.2 Neisseria mucosa strain FDAARGOS_260 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 1705163 36 100.0 34 .................................... TCACGTGCCAGTTTGCATTGCATGAACTCGTTTT 1705233 36 100.0 34 .................................... GAAGTTCGTCATGTCAATGAACCATTTCGGTAAA 1705303 36 100.0 35 .................................... ATCATATTTCAGCGTTATTTTGCTGGTTTTAATAC 1705374 36 100.0 33 .................................... TTCTGTTTCCTTCTCTTGTTGCTTCTCTTCTTT 1705443 36 100.0 34 .................................... AAATCACCTGCTTATGTGGCAATGCATCATATCA 1705513 36 100.0 35 .................................... GTTGTTGATTTGCTCGGTGTGTACACCTTGAGTAC 1705584 36 100.0 33 .................................... AACTATGGAAACTATGGTTGCTCAATATCGTTC 1705653 36 100.0 35 .................................... CTTGGCAATTTCTTGGTTTTGGATTGCCGGACTTG 1705724 36 100.0 35 .................................... CCATAATGGCATGTGCTACGCCAACGGCTTTTGAT 1705795 36 100.0 35 .................................... AAATTACCTAGTAATGCAATAGCCATCGCATTAAC 1705866 36 100.0 33 .................................... CGCAGCAACTGCGCCTTCATGACGGAAGTAACC 1705935 36 100.0 34 .................................... CTTCCATATCTGTCTGTATACAGGTCCGCTATGA 1706005 36 100.0 32 .................................... GGCTCTATTAGCCTCTATTTTAGGCTTGTTTA 1706073 36 100.0 34 .................................... AGAGATAAGCGGGCGAGAGGTATAAGGCGTATTG 1706143 36 100.0 34 .................................... ACGAGTTTGTTGATTAATAGGCATTTTGATTTCC 1706213 36 100.0 34 .................................... ATCGACTCCAATACAGACACGATACCGTCTTTAT 1706283 36 100.0 34 .................................... AGTTAATTAAAAAGTTTATAAATAAAAGCAATCC 1706353 36 100.0 35 .................................... CCATACACGTAGGTCATTACAGGACGCTTAGCCAT 1706424 36 100.0 36 .................................... CTGAATCGGCGGTTTTCGTAATCCATGCTGAACATC 1706496 36 83.3 0 ....................C.......G..TCA.T | ========== ====== ====== ====== ==================================== ==================================== ================== 20 36 99.2 34 GTCGGAAGACTTGCCCCACTAATCGGGGATTAAGAC # Left flank : GGCAAGAACGAATGGAGGAGCAACCAAACAAGATCATAGGCAACCAAGCACACGACAAACTCTATCAAGAATGGAAGGCAGCCCTGCAAACCGCCGCAGAAAGCCCAGATTTCAACGCGGCAGAGAAAAAAGAAATTGCTGACGCGTTTGCCGTCAAAAAGATGATGGCAAAATACGCGAAATGGCTGACCGACAAGCGCGGCAAAGAGCTGAAACCCATCTTGGCGAAGCTGCGCGGCGAATAGATTTTCGGCTTTATCGAAGCCCAAGCTTTTCAGACGACCTAAAGCCGCAAAACGGTTAAAAAGTGTTGTCCAATGCAAAGCAGGCGGCTATAATCCGAAACACAAGTTTTCCGACGGATAGCGAAAAGTCTGTCTTTCGGCTGCTCTTTTCAGTTAAGGTTTTATTAAATAATGTCTTTGTTGGTTAAGGAAAAATGCTAACTTTTCTTAACTATGTAGAAGATTGAAAATAATGAAATTTTTTGACCGAGTGCA # Right flank : TCTTTTCAGATGACCTCAAGTCAGGGGCGTCTGAAAACGTAGGTCGGATTCTTGAATCCGACAAATATTCCGACGTTTCTACATAGCAAAACAGCCTTGATATTGCATCAAGGCTGTTTTTGTTGGCGGAGGGTTTGTGTGAGTTCGGGGTCCTTTGAAAAGCGGGTTTGTGTTTACAGCTTGCCCACGCCGCCCAAGATGATGCCTTCAGGTAAGGCGGGTTTGCCCAGCGTGTGGATTACGCTGCTGTTGGGCAGGGGATAGCAGCGTAAATTGTCCTGCTTGGCGTTGAGCATTTTGCAAAGTGTTTCAAAGCATTGCCTTGCTTGATCACTGCTGCCGATGTGCAGGAAAACGCTGTTTTGCAGAGGGATGGCGTGCTGTATTAAATAACGGTGTGCTTTTCGCAGGCGGTGCGGGTCGGCGATGTCGTAGGCGATGAGGTGGCGCATTTTTATTCTAAGGTGGTCAGTCCGCTTAATTGGATTTCAGGCTGCCCG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGAAGACTTGCCCCACTAATCGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 2 1711282-1709769 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP020452.2 Neisseria mucosa strain FDAARGOS_260 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 1711281 36 100.0 34 .................................... GTAGCCAGAGACTGCATAATCTGCTTGGCAATAC 1711211 36 100.0 34 .................................... TCGGTTATCCCAGCCGATAGCGATGGCTTGTTCC 1711141 36 100.0 33 .................................... GGGTTGACGCGGCGCAGCGTACCCGCGTTTTGG 1711072 36 100.0 34 .................................... AAAACCTGCAAAGACATCACGACCAATGATATTA 1711002 36 100.0 33 .................................... TCAGTAATGTAATGGCCATCGCATTGACGATGG 1710933 36 100.0 35 .................................... ACCTACTTTTAATTCAATAGTACGAATCAGTTTCT 1710862 36 100.0 36 .................................... GGCACACGCAAGCCTTCTTTGTCCGCAAAAACCTGT 1710790 36 100.0 34 .................................... GGGCAACAGCGGAACTGCTTCAGACAACCTTTAA 1710720 36 100.0 35 .................................... ACGTAAATCTTTTACGAAACGGGCTTCAGTGTAAT 1710649 36 100.0 34 .................................... AGACTTACGTTCCATTTTACGCACTTCGTCTTTG 1710579 36 100.0 33 .................................... GCTTCCATTGCTTTTGCTTTATCCCAAGGTCCT 1710510 36 100.0 33 .................................... TTAATGCCTTTGACGTTGCCGTAGTTGCTTTTC 1710441 36 80.6 36 ........................T.TCT..C.AG. TTTTCAGACGACCTCAAGCAAAGGTCGTCTGAAAAT 1710369 36 91.7 35 A......A..C......................... TCCAGTGCTGCCGTATAACCTCCGTAGAAGTACAC 1710298 36 97.2 35 ....................C............... ATTAGCCAAAGTTACAGCCATATCAAAATCCTTAA 1710227 36 94.4 34 ................T...C............... AATTTGGCGTGAAAATATGCCGCGTCGGTCTGGT 1710157 36 94.4 34 ...................GT............... GGATTCGCGTCCTCTGTCGGAATAATAGGTATTG 1710087 36 88.9 32 .................G.GT..............A GCGCCGTTGTCAACAATGGCTACACCTTCTTC 1710019 36 66.7 35 A.AA...............GT...AT.CT.C...CT TTTCAGACGACCTTAAGTCAAGGTCGTCTGAAAAT 1709948 36 88.9 35 A......A..C.........C............... GTTACATCTTCTAGGTTTGGATAAGCCTCCATCAA 1709877 36 75.0 36 ..............T.....T...A.TCT..C.AG. TTTTCAGACGACCTCAAACCAAGGTCGTCTGAAAAT 1709805 36 80.6 0 A...........A....T..T.........A..AT. | C [1709771] ========== ====== ====== ====== ==================================== ==================================== ================== 22 36 93.6 34 GTCGGAAGACTTGCCCCACTAATCGGGGATTAAGAC # Left flank : ACTGATTTTTTGCGAGCTCAAATCCGATTTAAGCTCCGAAAGCAAGCTGGCAGACCCGCTAAGGCAAGTGATCGACCAAAGCCTCAACATGGGCAAAGTACGCCGCGTCCTGATTTTGTCGCCCAAAATCCAAAATGATTATCAAAAAGAAGAACGTAAAAAACCACAATGGATGGAATTCGAGCGCACCTGCGCCGCCAAAAACATCCAAATCATCATCGCCTGCGACAAAGAAGCGCTGAAAGCCCTGACAAGCTGACATCGAAGTCTCTTGACCATGGAAACGTCGTCTGAAAACGTTAAAAAACATTGTGAAATGCAAAGCAGACGGCTATAATCCAAAACACAAGTTTTCCGACGGATAGCGAAAAGTCTGTCTTTCGGCTGTTCTTTTCAGTTAAGGTTTTATTAAATAATGTCTTTGTTGGTTAAGGAAAAATGCTAACCTTTCTTAACTATATAGAAGATTGAAAATAATGAAATTTTTTGACCGAGTGCAG # Right flank : AAACAGCCTTGATGGTTTTGTTCCATCAAGGCTGTTTTTGCGTCGTGCGTATTGTCAAGCTGCTTGGATAATGCGGTATTGCCCGTTGCCGAATACGGTTTCCTTGCCCAAGTGCAGCCATTGCCCGATATACAGCATTTGCGAGAAGGCGGGCGAAAGGCCGGTCAGTTGCCATGTGCCGATTGCGCCGCTAAGGGGCGTAATCTGCTTTTGACGGTTGGAAAAACGGCGGTGTTCGTGCCATGAAAGCCGGGGCGGGACGCCTTGTCCGCCGATTTGGGCGGACAGCTCGGCAGCGTTTGCATTGTTGCCCCAGTGCAGATGGGCAAGCGTCAGATAGCGGCGCAGGAGCTGGCGCAGGAAAACCGCCTGCGTCAGTTCGGTTTCCCGCAAAATCCTGCCTTTTTGCTGAATACGCAGAGGCGTCAGCAGCTGAATATGCGCATGGGAGGGATAGCGTTCGGGCAGCCTGATATGGTTGTCGTGCAGCGCGATGGGGC # Questionable array : NO Score: 2.83 # Score Detail : 1:0, 2:0, 3:0, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.89, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGAAGACTTGCCCCACTAATCGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [41-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA // Array 3 1790460-1795473 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP020452.2 Neisseria mucosa strain FDAARGOS_260 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 1790460 33 97.0 37 T................................ AGATGTTTGATGCGCGGCAAATCCAAGTTGTCGGCGA 1790530 33 100.0 35 ................................. TTTGCCCGTGCCGACACCGGAAACGGAAGCCGCCA 1790598 33 100.0 34 ................................. AGTTTCGACAGCTTCAGCCGCAACGTTGCCAAAG 1790665 33 100.0 33 ................................. GCATGTCAGACAATGGCTTGCCACAACAGATCC 1790731 33 97.0 33 A................................ ATAAATTATTAAACTTAGATATTACTTTTTAGC 1790797 33 97.0 33 G................................ CAGCATTTCCGAAAAACTTGGTGCGTCTTTTCG 1790863 33 97.0 32 G................................ TCGCAAAGTGGCGATGAACCCGTTTTGGATGG 1790928 33 97.0 33 G................................ CGTACGATGGGCCGCCTTGTGGATTTGGAGATT 1790994 33 97.0 35 A................................ AAGTCATGGATGACTCTCAAGGTTTAGATAGCCTT 1791062 33 97.0 35 G................................ CTTCATGACCCGCAGCCCCGTATCCTTGCCCTGAC 1791130 33 97.0 32 G................................ TGTTACGCCAAGTCTACCGCCTGCCGTGTAGT 1791195 33 100.0 33 ................................. CTGAACAATCTTGTTATTCTGTTATTGGAACAG 1791261 33 100.0 34 ................................. AAACCGTTGGCCGCATTTGACGACGGCACTTTTA 1791328 33 100.0 33 ................................. CAGCGCGATTTGATGCGCTTTCCCCCGATTTGC 1791394 33 100.0 36 ................................. CATCATCAGGCGGGCATTGGCTGTCCATGCCGCATC 1791463 33 100.0 33 ................................. TATGCACGCTATGGGGAGGGGACCGTCAAAACA 1791529 33 100.0 35 ................................. TGAGTTTACTGTGCATAGTTACTCTGATTATTACG 1791597 33 97.0 35 T................................ TGAGTTTACTGTGCATAGTTACTCTGATTATTACG 1791665 33 97.0 33 T................................ ATGATTAAACCTTTTTCAACAAATGATAAACTT 1791731 33 97.0 34 T................................ CATCAAACCGCCATCTAAGTATTCCGACAAGTTA 1791798 33 97.0 32 T................................ GATGAGTTGGATTATACGCGCTTTTAAACTTT 1791863 33 97.0 32 T................................ GCATATGGTTGGTAATTGTTTGCGGATTTTTG 1791928 33 97.0 33 G................................ TTACCACGTCCACCTACGATGGTGAAAATCAAA 1791994 33 100.0 34 ................................. AGAACGTGCATGGGCACTCTGCCCAGCAAGTAGC 1792061 33 97.0 34 T................................ CGTACTTCCAGCGTTTTCAAGTACTACAAGATAG 1792128 33 97.0 35 ....T............................ CACTTGAGTTTGGTTTCGCCTTTAGACGGGGCTTT 1792196 33 97.0 33 G................................ TCCTAATTGAGTGATGGGTTTAATGGTGACGCT 1792262 33 97.0 33 T................................ AAAAAGATTTCTTGTCCAAATGAAAACCATAGG 1792328 33 100.0 33 ................................. GATAACGTCGCTCCATGCTGGTAACGTGAACGA 1792394 33 97.0 34 A................................ TAAAGTGGAAAATATGATTGAGGCCAAAAAATCC 1792461 33 100.0 32 ................................. TGAAGTGGTAATCGCAACGGACAAACAGGAAG 1792526 33 97.0 34 T................................ ATTTCGCGCTTGTTTCAACAAGTCGGATTATAGT 1792593 33 97.0 32 T................................ TTGACCGCATCGCCGCTAGCCTCATCCGTTTT 1792658 33 97.0 36 G................................ TGATGATATATCGCCGTAAGCCTGACCGGTAACGAA 1792727 33 97.0 32 G................................ AATTTAGGCAGAACACGTTTAAGCGTTCTCAC 1792792 33 97.0 35 G................................ CCCCACCGCCAGGCAAAAAAAAGACTTAGTGTCAA 1792860 33 97.0 33 G................................ CCATCGACGGTACGGAAATCGACTGGGACAACA 1792926 33 97.0 34 T................................ TATGACGGTACTGAAACAGCAGCCAACATCAAAG 1792993 33 100.0 35 ................................. CGTGTGACGAGCGTTGATGCGAACAGTTTTAAACT 1793061 33 97.0 33 G................................ AATCAAAACAATTCAAAAAATGTTTGGATTGGA 1793127 33 97.0 34 T................................ ATTTCTCAAAAAGCTAACAAATCAGACAATATGT 1793194 33 97.0 33 A................................ AGGAAATGTCTGAATATCAAGAAAAGATTATAT 1793260 33 100.0 33 ................................. ATAATCCGCAACCGTCCGACACGCCGCCGATAT 1793326 33 97.0 33 A................................ ACGCGGTGGATGTTTCGAGAGCGACGAGGCTAC 1793392 33 100.0 33 ................................. CCACCATGTCTGAGCCAAAAGACAACGAAATCA 1793458 33 100.0 33 ................................. CACTTGTCTTGATGCTGTTTGCGCCGCCGCCAA 1793524 33 97.0 32 T................................ CAGTACATCGTGTACAATGAGACCTTGTTTGT 1793589 33 97.0 34 G................................ GCTGTTACGGCAGACGACCTGAAATACGGTATGA 1793656 33 97.0 33 T................................ TTCTTGGTTAACGATGTTACAACCACTGGCTTT 1793722 33 97.0 33 A................................ CGTGGTCTTGAATCATCTGCAACCGAAGTTTCA 1793788 33 97.0 34 A................................ CAGCTAGAAAACATCTTTTGCGACAATTTAGGGT 1793855 33 100.0 33 ................................. TATTGCTACCTTATCCCTGAACATAATATCAAA 1793921 33 100.0 33 ................................. AGCCAAGTTTCGAGTTTGTCGCGTTGCTCGGGG 1793987 33 97.0 33 T................................ ATTTCCGCTCTCCAATTTGTTTAACGCCTTCCG 1794053 33 97.0 33 ......................G.......... AATTTGTGCCGCTGCGCCATTGCCTATATTCCG 1794119 33 93.9 32 A................A............... GCGCAACAACCGAAGCTACAAGGTTTACGGCT 1794184 33 97.0 34 A................................ TACTCGAGCCGTTTGCCTGCCTACGTTCAAGGCA 1794251 33 97.0 33 T................................ ATCACAACCGAGCAGGCCTCGCCTGACAAATCG 1794317 33 97.0 33 G................................ CAATTGATGGTACGGAAATTGACTGGGATAACA 1794383 33 97.0 34 T................................ TGAAAGATGTAGGTAGTAAAGCGTTGGGATGGGG 1794450 33 97.0 34 T................................ ATTTCAGTTTCCTTTTCAGTTTGGTTAGAACTGC 1794517 33 100.0 34 ................................. CGAATTGCGGATGAAGCGGACAATATCCCATTCA 1794584 33 97.0 33 G................................ TGTTCTTGTTCGATGCTGTTAGAGCCGTCGGCA 1794650 33 97.0 33 T................................ ACTTTGTGACCAAATCATAACAGCAATCGGCGT 1794716 33 97.0 32 G................................ CAACCATAACCGACACCGCGCGTTTTAATTCG 1794781 33 97.0 32 G................................ GCCAGATGAGGAGCATCAAGAGGGCGAACAGG 1794846 33 97.0 35 T................................ ACGCTCTTTTTTAGTCAGCTTTTGGCGCAGCGAAT 1794914 33 100.0 34 ................................. AAGCGTTTCTTGAGTAAGTTGGTTCACGTTCATT 1794981 33 90.9 32 TA...T........................... TTTTGATTTTTTTATGGTATTTTATGTGTTAT 1795046 33 93.9 33 .A...T........................... AAAAAAGGAGCAAGCTCTTCTTCGCCCAACTCC 1795112 33 90.9 31 AG...T........................... CGTCGCCGTCAGTTTGCCGTTTTCGTCTGCG 1795176 33 97.0 33 .....T........................... AACAGCCATTAGTTTCCATTCCTTCGGTTAGCC 1795242 33 97.0 34 .............A................... TTCATCTGTTAGATAAGAATCGTATAGAGCATTC 1795309 33 97.0 34 .............A................... AGGCACTACAGTAGTCAATCAACATGATTACTCA 1795376 33 90.9 32 G.....T.........................T AGACGACCTCTACCGTACTGGCGATTGATTTT 1795441 33 81.8 0 G.T..........A..T.A...C.......... | ========== ====== ====== ====== ================================= ===================================== ================== 76 33 97.3 33 CCCAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC # Left flank : TGCACATGGGAATATAAAATGCTGATGCTGATTACTTACGATATTTCGCTGGAGGACGCGGAAGGACAGGCAAGGCTGCGGCGCGTGGCGAAATTGTGTTTGGACTACGGCGTGCGCGTGCAGTATTCAGTGTTCGAATGCGACATCGCGCCCGACCAGTGGGTTGTTTTAAAAGACAAACTTTTGAAAACCTACAACCCCGAAACCGACAGCCTGCGCTTTTACCATCTGGGCAGCAAATGGCGGCGCAAAGTGGAACACCACGGCGCGAAACCGGCGGTGGATGTGTTTAAGGATACGTTGATTGTGTGAATCGCCAACCTGCGGTTCTCATGAAAATGCAGCAGGGTTGGCGAATTGGGATTGTTCTTTAACAATCAGGATATTGCGAATGCAGGTGTAACGGAAAAGGCTGTGTTATACTCGCATTCGCGCTTTTCTTGAGAGTTTAGCGAAATCGGGGCTGAGAAACCTGATGGAGCAAGGCTTTTGAGAGAGGC # Right flank : CCCGTAGCCGAGGGAGCAGAGGTAGAGGCGCAGGCCCAGCCATCTTCAGCTAACCATATGTCGAAACCAGACTGTGTTTTCCTGATTTAAACCATCTGTAACCATTTACTTTTTGATGGTTATGTCTGAAAAATCATCTGTGGAATAGGAAATCGTTAATCCATCAAATCTCTGTTTTTCAGACGACTGTAATTGGATTTGTTTGGTTCTAATTAAATCAGATTTTTCCAGCTTCGGGCTGCCGGATAAATTTGATGCAATACAGGGTTTGATTAGCTAGGGGCTGGATAAAAACGGCAGCTTTGTTATAATAAAACTACTGGCAGTTACATACTTTTCTTGGCATTGCGCCGTTTTATTCATATTAACGAAAGAGGAAAACAAAATGTTTCCAGAATATCGTGATTTAATTTCCAAATTAAAACAAGAAGACGCCCACTTCGCCCGTCTGTTTGACGAGCATAATGAGTTGGACGATAAGATTACAGGTTTGGTTAATA # Questionable array : NO Score: 5.44 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.32, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched TCCAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.80,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //