Array 1 214710-215820 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NXCF01000007.1 Moraxella catarrhalis strain BE4L BE4L_contig_7, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
    214710	    28	 100.0	    32	............................	ACTGATCCTCCCAGCGAAACTCAAAGCGAGCC 	
    214770	    28	 100.0	    32	............................	ATAGTGCCTGTGGGTTGACAAATCTTTGCCAA 	
    214830	    28	 100.0	    32	............................	TTGATGTACTAAAGTCGTGTTAATAACATAAT 	
    214890	    28	 100.0	    32	............................	TTACCTGATGATACCATTTCCAATTTAACTTC 	
    214950	    28	 100.0	    32	............................	CTGCCACCTCACACAGTGGCAGAGTTTACCCA 	
    215010	    28	 100.0	    32	............................	AAGCATTAATAAAATTCCAAGCATTGAAAGTG 	
    215070	    28	 100.0	    32	............................	GATGTCGTGCCAGATACCCAGTCTATCCAGGC 	
    215130	    28	 100.0	    33	............................	TTACACTTGTAATCGTCGAAATGCTTCTTGTGT	
    215191	    28	 100.0	    32	............................	TACCTGAAATCAGACACGATCAAATTAAATTA 	
    215251	    28	 100.0	    32	............................	CCAAAGACACCACACATCAGCTACTGCAAACC 	
    215311	    28	 100.0	    32	............................	ATAACAGCAACAGGTACAACCGCCGATAAGAT 	
    215371	    28	 100.0	    32	............................	TTGCAGGTGCTGAGAGCATTAGCGATAACTTG 	
    215431	    28	 100.0	    32	............................	GTTGTTAAGCTTTGATTAAGTGTGTTAATACT 	
    215491	    28	 100.0	    32	............................	TTGATTAGTTGAGTTTATATTTGCCCAATTGG 	
    215551	    28	 100.0	    33	............................	ATTCATCTCATCAGCCATCATTTCGCATTCAGG	
    215612	    28	 100.0	    32	............................	GCTTTGGCGGTTTTATTCGGCTCACTTGGCGT 	
    215672	    28	 100.0	    33	............................	AACCGCTTTAAATGCAACAGATAAGGCATCTGT	
    215733	    28	  96.4	    32	...................A........	TGGGGAAGTTAGGCATTTAAAATGGCAGGATA 	
    215793	    28	 100.0	     0	............................	|                                	
==========	======	======	======	============================	=================================	==================
        19	    28	  99.8	    32	CTTCACGACCGCACAGGTCGCTTAGAAA	                                 	       

# Left flank :   TGCCTGTGCCAAGTAAAATGACCGTCGTGTTGGCGATCGGAATATTATAATAGTGGTTTTGGTATTTCGTTTCGGTCAGGTATAAGATACGCCCATCTTTTTGCATGACTCGGCAATGCTCAAGATAAAATAAATTCGCCCGTTTGGAGTGTAAAATTGCTTTCAAATCGGTCGGTTTGAGCGTATTCATAATAATACAAATCCATGTTTAATGATTCAATTTTATCCTAACAATTTTCAACATCATTTAATATGATTTTATTGGATTATAAACTAAAAATAAATTTATACCAATCATTTTTTAATTGTATTTAGCGATTAAAATGTTTTAAGATAACCCAACCAGAAGATGGAAAAATAACTGATTGACCCTTTATTTTTTTACTATTTAAAAACTTGAATATTTTCAATAAGTTATAACATGAAGATTTTTGATTGGGTTTTTGACAAATTTTATCATAATGACTTGTTATTTCTTATTATTTTGGTTTATACTAACT
# Right flank :  ATTTTGTTCTATGGCTACGCTGATTATTTAAAATTTTTGTGCCAATCCCTTGAAAATTTTATCCTTAACCATTATGAAGATGGGGAATTTATATTAACTTTTTTGGGGCAATTTATGACCGAGCAAACCACCGAACAAACCACTATGGAAGAGATTACAGCTGAGACGACAACCGAGCAAGTCGAAGCACTTCATAGCCAAATCCAAGCGCTAGAAAATGAAGTCAAAGAAGCCAAAGAGACTGCCGCGCGCGCCAATGCCGAAAGCTATAATGCCCAACGCCGCATGGAACAAGAAACCGACAAAGCCAAAAAATTTGCACTACAAAAGTTTGCCAAAGAGCTTTTGGAGGTGGTTGACAACCTAGAGCGTGCCATTAAAGATGCTGAAGAGACAGGTGCAGATGACGCATCACTTGAAGGTATTCGCCTAACACATAAAGTACTGCTTAGCGTTCTTGAAAAAAATGGCGTCGTGGCCGTGGGTAATGTCGGTGATAC

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTTCACGACCGCACAGGTCGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [8,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched CTTCACGACCGCACAGGTCGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-7.40,-7.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [81.7-71.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.92,0   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
//