Array 1 84525-81904 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJEU01000011.1 Enterococcus cecorum strain PS6 Contig_11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 84524 32 100.0 33 ................................ AACGAACTCTTTAATAGTAGATATAGAACGTTT 84459 32 100.0 36 ................................ AAAGCAAGTTCCTTAATCAGAGTATTACGCAAGATT 84391 32 100.0 35 ................................ TAAAGCTAGTGATTGGCAAAGCGTTGTTTTTGATA 84324 32 100.0 34 ................................ TGATTTAGGAGATGGTATTAAAGATGGATTAACT 84258 32 100.0 33 ................................ ATGAGTGTACCAAAAGAAATCTTGGACGCGTAC 84193 32 100.0 34 ................................ GTCCTATAAATTCGATGGCGAAGGCTATGAGTTA 84127 32 100.0 34 ................................ ACTGTATTTTCGCAAGGAATGACAACCACACGTC 84061 32 100.0 33 ................................ TTGTATGGAGGAAAATTAAATGATTAATTTACA 83996 32 100.0 34 ................................ TATACGCTCTGCCAAGTGACTGCTCGTAATCTTG 83930 32 100.0 36 ................................ CATAACAAGCCTACCTTCTCGATAAGCTTGCTCCGC 83862 32 100.0 33 ................................ ACAGTTTGAGAGAAGCTTCAGAAAAAACCGGTT 83797 32 100.0 33 ................................ ACAGTTTGAGAGAAGCTTCAGAAAAAACCGGTT 83732 32 100.0 35 ................................ TGATGAAATGGGTAGCGGAGATGCATTTGACGATA 83665 32 100.0 34 ................................ CACGCTTGCTCTACTTGTATGAAGTAATCTCTGA 83599 32 100.0 34 ................................ GCTCATACCTAAGTCTAAGAGTACAAAAATCTAT 83533 32 100.0 34 ................................ AGCAAACGTTGACTACTTTAGTTGCTGATGAAAC 83467 32 100.0 34 ................................ ATACTAGAATGAAGGTATTCTCTAATCGTATTAG 83401 32 100.0 34 ................................ CAAACATCCTTTCTCCTGCTTACCCGGCAGTTCG 83335 32 100.0 34 ................................ TTGACTTTCTCAGACGATGAATGAGAAGTACTAA 83269 32 100.0 34 ................................ TATTAACATCAAGTGCTTTTAACATGTATTACCT 83203 32 100.0 34 ................................ GCTAAAAATTGTTGGATTCGACAATGTAATTTTT 83137 32 100.0 34 ................................ TCCCCAAGCTTTCCACGCTACAGCACCAATTGTA 83071 32 100.0 35 ................................ TGAGAATCCTGAATTTACTACTTATTTTAGATTTA 83004 32 100.0 35 ................................ ATCATATCAGCATCAAAATATAATCGATAGCCATT 82937 32 100.0 33 ................................ ATAATAAAATTCCTCCTATTAAATAAAATTATT 82872 32 100.0 35 ................................ CCTACTGCAAGACATACGAAACATGGATAGTGATC 82805 32 100.0 34 ................................ AAGTTGGTAGCGTTGATGACTACCGTTTGACTAA 82739 32 100.0 35 ................................ TCACTCATCGGTTACCACCTCGATGTCAGCAAAGT 82672 32 100.0 35 ................................ AAGATCAGGGCAAAATTGTGACTTACGATATTCGC 82605 32 100.0 37 ................................ CTTGATGCGGCTATGATGAAACGCTGCGACCATCACC 82536 32 96.9 34 ..T............................. GTTTACTTTTCTTCACAGGCCTGCGCATCAACGA 82470 32 96.9 35 ......................A......... CATTAGCACTACTGGTCTGAGTCGATTGCCCAGCT 82403 32 100.0 34 ................................ CAAAAATCTGCATGATAAAGTCGCTAACCGCTTG 82337 32 100.0 36 ................................ AACGAATTTAAAAAAGAAATTGGAGGGGAAGTAACA 82269 32 100.0 36 ................................ TAAATGGTTAACTTTATACATAACAGACTTTAGAAT 82201 32 100.0 35 ................................ CAAATACGGTTGGTCTTGTTAAGATGCCGCCTTTT 82134 32 100.0 35 ................................ TAAAAAAGACGGCACATCCAAATGACTGTCTAAAT 82067 32 100.0 35 ................................ TTCAACATATTCTAATTCCATTCGTCGCTTAGCAA 82000 32 96.9 33 .............C.................. TAGTGAAATACATACCAAAAAGTGCATTAAAGT 81935 32 93.8 0 A............C.................. | ========== ====== ====== ====== ================================ ===================================== ================== 40 32 99.6 34 GTCTCACCTTACATAGGTGAGTGGATTGAAAT # Left flank : CAATTACTTGCAAAATCAATTCGTGGTGATATTTCAGGTTATCCCCCTTTTCTCATATAATTTGGTGATAACAATGATGGTATTAATAACATATGACGTAAATACAGAAGATAGACATGGAAGAAAGAGGTTGAGGAAAGTTGCAGAATTATGTGTTGATTATGGACAAAGAGTTCAAAATTCTGTTTTTGAGTGTTCTTTAGCCCCTGCTGAGTATGTTGAAATTAAAGAAAGACTATTAAAAATAATTGATGAAACAACGGATAGTATCAGATTTTATAATCTCGGGAAAAACTGGCAACATAGAGTTGAAAAAATAGGATTTGATAATTCGTATGATCCAGATAAAGATTTGTTAATTTTTTGAGTTGAGCGAACCTATAGTGAACAGAAAATCATATATAGGTTCGCCTTAAATAAATGATATTTATCTAGATTTTTATCAATTATCAAAATGGTTATCACTTATAATTATGTTATAAACTGCGCTATTTCGCGCA # Right flank : AGTTTTACTGATACCACATCATTAAGAGTACAATTTGAGAATTATGTAGACCAACCTCCCCAAGCTAAGTGACTTTTGGGAGGTTGGTTTGGTTGGGTTATTCTGCTAGTTTGACGATTTGGGTGCCGTGGAGTTCGTGGATGCCAAGTTGGTGGGCGATTTCTTCGGCATTTTCGTAAGTGATTTGTCCGCCTGGTAAGATGGTGATGCGATCAGCTGCATAGTCAATCAATTCTTTTAAGCGTGGGAGAGTGTCTAAGATGGATTCACTCATTGGACCACCATGGGTAAGGATACGATGGACACCGTGATCAGCTAACCAGTCAATGGCTTCAAATTGGCGTTCGACGGGTATTTCGTCAAAGGCCATGTGGAAAGTAATCTGTAAACCTTCTGCGACTTCAATGAGTTCTTCCATCGCCTCTTCGTCAATCCAGTTACTTGGAGTCAGGCAACCAAAGACCACGCCATCGACACCAAGTTTTTTTGCTTCAATCAGA # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACCTTACATAGGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.38%AT] # Reference repeat match prediction: R [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //