Array 1 1059752-1056122 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGXFD010000001.1 Modicisalibacter tunisiensis strain LIT2(T) NODE_1_length_3219732_cov_127.729724, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1059751 28 100.0 32 ............................ ATCGGCATCGATGTCGCGGGTCACGCAGCACA 1059691 28 100.0 32 ............................ GAGATCAGCAAGACGTGTTACACGCAGGCCAA 1059631 28 100.0 32 ............................ TCGACGATCTGGATCACCCCCTCGTCGCCGAC 1059571 28 100.0 32 ............................ TGGTCGAGATGCTCGCCTTCCGGCTTGCGGCG 1059511 28 100.0 32 ............................ TTCGCCCTGAACATCCTGCGCGCCTGCTGCGT 1059451 28 100.0 32 ............................ TGATAGTTCGCAGGGGCCTGCAAGGAGTCCGC 1059391 28 100.0 32 ............................ GACCCGAAACCCTAGCGGCGCCAGATGAGATC 1059331 28 100.0 32 ............................ TATGCCGAAAAAAGCCGCTCGAGTGAGCGGCA 1059271 28 100.0 32 ............................ TGGCTGATCTTGTGGCCATCGCTGTCCATCTC 1059211 28 100.0 32 ............................ ATGCCTGGGCTTCGTGGTAGATGCGGATGCCG 1059151 28 100.0 32 ............................ TGGGACGCGATGGGCTCGATCGACGGCCGGCT 1059091 28 100.0 32 ............................ AGCTGACCGTGATGGCCCAGCCGTATGTCGAC 1059031 28 100.0 32 ............................ ATACACCGGATCATTGCGGCGCCGCTCTCGGA 1058971 28 100.0 32 ............................ CAGGGCAACGTCGCCACGGAGTGGGGCACGGC 1058911 28 100.0 32 ............................ TGGGCGGGCCGGATTGGAGTCGGGATGATTTC 1058851 28 100.0 32 ............................ GAGATCAAAACGAAGCTGCCCAAGTACCAGGT 1058791 28 100.0 32 ............................ AGTGTTCGGGCCAGACGTCGCAGTGCTCGGGC 1058731 28 100.0 32 ............................ ACTTCGGCGCGATCCAGTCGATCGCCAGCAGC 1058671 28 100.0 32 ............................ TTGAACTGCATATCAGCTCGACCGCGCTGACC 1058611 28 100.0 32 ............................ ACTGAGTTCTCCAGCAGCTACGCTTGGATTCA 1058551 28 100.0 32 ............................ ATTTCGGCATTGCCACCCCCGCTGATCGTTAC 1058491 28 100.0 32 ............................ TGCCGGCGAATGCTTTGGCTGACTTGCGGCTG 1058431 28 100.0 32 ............................ GTAATCTGCCGTGTGGTGTAGGCGTGGATGAT 1058371 28 100.0 32 ............................ AACATCGACGCCCAGGAATCCGCCGCCACTTT 1058311 28 100.0 32 ............................ CTTCGCCGGTGCCGGCGGGTTCAGCACCGGCG 1058251 28 100.0 32 ............................ GTGAGCAGCAGAAAACCAACCGCAACACTAAG 1058191 28 100.0 32 ............................ AGTACGAGGCGCTGACCGGTGCTCGCCCCGAC 1058131 28 100.0 32 ............................ AAAGCCATCGGTAACGCCGTTATAGACCTGCT 1058071 28 100.0 32 ............................ CAGATCGCTGACTCTTCGGCCCAGGTCCAGGC 1058011 28 100.0 32 ............................ GCGGCCGGTGGCGCCCTTCACGGTCTGTCCGG 1057951 28 100.0 32 ............................ TGGAGCGCGGCGAATTGCTCGGGCGTGAAGTT 1057891 28 100.0 32 ............................ CACTGAACGCGCCCTTCGAGGGTGTCCTTGTC 1057831 28 100.0 32 ............................ TCGCCCAGCGCCTGGGGCACATGCTGACCGAC 1057771 28 100.0 32 ............................ TCGAGCGGCTTCGGGTCGGTCAGCAGCAATGT 1057711 28 100.0 32 ............................ GGCTCGGTGGAGTAGTTCGGCGAGGCCGACAC 1057651 28 100.0 32 ............................ TCGAAATCGTGGCGCAATACCTCACTGGGCTC 1057591 28 100.0 32 ............................ GCGTCGGCATCGCGCACCATCGGGTCGGCCGA 1057531 28 100.0 32 ............................ AGTGCCCCAGTCGTAGATCTCGATCGTCTCTC 1057471 28 100.0 32 ............................ TTGACGGCCGCCAATGCCTCGTCGAAGGCGCT 1057411 28 100.0 32 ............................ AGTCGGCGAGCTGGCGGTTGACGTCGGCCAGG 1057351 28 100.0 32 ............................ TCGAAGGGGGCGTCGGCGATGTTGAAGGCGAG 1057291 28 100.0 32 ............................ ATGCCGCGGTGTAGCGGTAGATCAGCGCGATC 1057231 28 100.0 32 ............................ ATGACAACAGTCTCCAGGTCGGCGTCGTCGAA 1057171 28 100.0 32 ............................ GACCTCGATGCCGCTGGTGTCGCTGAGATCGA 1057111 28 100.0 32 ............................ TGCAGACGCTGGACGCTCATCTGCAACGCATC 1057051 28 100.0 32 ............................ TACGCGACGAACCGCAACGTCAGCGGCGTCGC 1056991 28 100.0 32 ............................ GCGCGAGGCTTCCATGGTCTTCTCGACATTGA 1056931 28 100.0 32 ............................ ACCGATAGTCAGGGCCTGCCGTACATCCAGTT 1056871 28 100.0 32 ............................ TTGCCCTGCCCCGGCAGCCGGATGCCATCGGC 1056811 28 100.0 33 ............................ TCCCGCGATCTGGCCGTTGGTCAGCAGCCCCTT 1056750 28 100.0 32 ............................ GCTCGCAGTCGTTCCAGCCGGCCCACCACCAG 1056690 28 100.0 32 ............................ TTGGCGGCGTAGGCGTTGTTGCGGACGGCGTT 1056630 28 100.0 32 ............................ AAGGCGATTGTGACAGGCCCGGTCGGCAAGGG 1056570 28 100.0 33 ............................ ATGGCTCTCGTCGGGCAGGTGGGCCAGTACCGT 1056509 28 100.0 32 ............................ TGGAGTCACGAAGCCGTGCGCGAAGCCGGGTC 1056449 28 100.0 32 ............................ ATCAGATCGGCGGTGACTTCCTTGAGCGGGTC 1056389 28 100.0 32 ............................ ACCCCCATGATCAGAGCCAGCGTCACCACCAC 1056329 28 100.0 32 ............................ AGCGTCGGGAAGCGGTGCGGCCACACGGCCCG 1056269 28 100.0 32 ............................ GATGATGCCGGCAACCTCGCCGCCTTCCTTGA 1056209 28 100.0 32 ............................ TACGTCGACTCGAAGGTCGGCTACACCGCCAC 1056149 28 92.9 0 .......................GT... | ========== ====== ====== ====== ============================ ================================= ================== 61 28 99.9 32 GTTCACCGCCGAGCAGGCGGCTTAGAAA # Left flank : CGCTGATTGCCAATATTCGAGAGGCTCCTTCCTTGCTCGAGCAGGCAGTCATCCACTACCCCCGCTCGGTACCAGAGGACTACGCCGGCTCATGGAGCATCTACCAGAGGTTTCGCATTCCCTCGCGGCGTGCGGAGCGTATCCCGGGACGCTCGGTGCGCCTCAAGCGAGTCCAGGAGGCCAATGCCCGGGAGCTCCCCTTCTTCCAGATGAAAAGCGACAGTAACGGGGGACGGTTCCGGCTTTACTGGTCAGTACAGCCCTACACGGGCAGCGAGCCGAAGGTACGGGAATCGACCCCCGACTCCTGGGGGCTCTCCACCACGACAAATCCGGTGCCCTTGCCTGACATCACGTAAGATCAAGCATACCCTTTTTTCGAGCGTCTCTTTCACCCCCTGTAAAATCAGAAACTTGCAAGGCGGCTCGAAAAAAGGGTCTTTGGCTCTTTAATAGCGCAATCACTTGATTATATTGAACATAGTTCGCTCGCCTCACTA # Right flank : AACTGATAAGACTTTTTCGCGATTCATTGCCCCTCAAAACTCGATCCCCACCCCGGCATACACCGTGCGCCCCGGCGCCGGGTCGTAGTAGCGCTCGTGGCTGGCGTTGATGATCACGTTGGCGTAGTGCTCGCGATCGAACAGGTTGCGCACCCCGGCGTAGGCCTCGAGCACGGTATCGCCACCCAGAGCCCAGCCGTCGCCGGCGCGCAGGTCGACCAGCCAGACGTCGTCGATCGCCACCTCGTTGGCGTCGTCGGCGACCATCGAGCCGATGTACCGGGTCTCCAGGGTGGCGAAGCGCCGGTCGAATCCCTGCCATGACAGCCGATTGACCCAGGTCCGCTCCGGCACGCCGGGGATGCGGTTGCCATCAAAATCCTGCCCGTCGACGCGGTAGTCGTCGAATTCGTAGCGCGCCAGGGTCAGGGCGCTGTCGACTCGCCAGTTCGGGGTGAACTGCCAGCCCAGTTGAGCCTCGATCCCCTCGCGGGTGCTCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACCGCCGAGCAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACCGCCGCACAGGCGGCTTAGAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.20,-9.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1135701-1145622 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGXFD010000001.1 Modicisalibacter tunisiensis strain LIT2(T) NODE_1_length_3219732_cov_127.729724, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 1135701 29 100.0 32 ............................. TTCGTGTTCCACGCGTTGCTGCTGCTGTTCTC 1135762 29 100.0 33 ............................. CTGAGCCTGGCGGGGCGGCTTCAGGACGAGTGC 1135824 29 100.0 33 ............................. GTCGCCCCGGTCTCGATGGCCAGCTGACGGCGC 1135886 29 100.0 32 ............................. ATCCACCGGCCGTGGGGCATCCAGGGCGGCGA 1135947 29 100.0 32 ............................. AACACGGCATGTGTCATGCCGTGGTCCGATGC 1136008 29 100.0 32 ............................. CACTGCCGCTGCTGCCGTGATCGTTACAGGCC 1136069 29 100.0 32 ............................. GAATTGACCGATCAAGCCCACACTGCCGGTGT 1136130 29 100.0 32 ............................. GACATCAGCGAGGCCTATCGTCGCGGCGACAT 1136191 29 100.0 32 ............................. TTCCTGTCCTCAATTACGCCTGCTGCACGTAT 1136252 29 100.0 32 ............................. CTCATCGCGCTCGGCGCGGGTCGCGTCGCGAA 1136313 29 100.0 32 ............................. GATCTGCCGCGGGGCGCCCAGGTCAACGTCAT 1136374 29 100.0 32 ............................. GGTGACCCAGGAACGTACCAGGACCCCGGTCA 1136435 29 100.0 32 ............................. GCTGGGCAGTTCTTCCAACTCCGTATTGGATC 1136496 29 100.0 32 ............................. CAGGTGCTCGACGACATCGCGCAGCAGCAGCG 1136557 29 100.0 33 ............................. GAGACCGCCACCATGATCAACCACTACCAGGAC 1136619 29 100.0 32 ............................. AACTACTGCTGCAGCCTACGAGAAAGATCGGT 1136680 29 100.0 32 ............................. CGCATGAAGACCTCGGCGCCGCGCATGGAGAA 1136741 29 100.0 32 ............................. CCCGACGGCACATTCGTGTCGCGTTCCTGCGG 1136802 29 100.0 32 ............................. ATCAAGAAGTGCTTGCGGCTGGCGCAGTCGAG 1136863 29 100.0 32 ............................. ACCCGGCGCTTTGGCCGGGTCGTGGTGGATGC 1136924 29 100.0 32 ............................. TCCCAGACGATCTGCTCCCAGGTGGTCAGCGG 1136985 29 100.0 32 ............................. ATGCTGGCGACGTTGAAGCCGGCGCCGCGCGC 1137046 29 100.0 32 ............................. GCCGTGTCGATGCAATTCCTGGTCTGCCTCGG 1137107 29 100.0 32 ............................. GTCGGCGCCTTCCCCGAGCTGACCACCAGGGC 1137168 29 100.0 32 ............................. GGGCCATCGGCAAACATCCCGCGCGTATGCTC 1137229 29 100.0 32 ............................. CACCGCCGCGGCGTCGAAATAGACCGACCGCC 1137290 29 100.0 32 ............................. CATCCCGGCCGCTGGCTGGGCACCGGCAACCG 1137351 29 100.0 32 ............................. CCCGCAAACCCCCTCGACTTGGCCATCGTGCC 1137412 29 96.6 32 ............................C CGCGCGAGCTGGTGGCGGTGGTGCGCACGGTC 1137473 29 100.0 32 ............................. GACGCCGCCTTGATCGACCTGCGCAACCGCTA 1137534 29 100.0 32 ............................. CGACATGCAAGGCGCCCAATGACGTCGCTCAG 1137595 29 100.0 32 ............................. ACGAGCGGCATGCACCCCGAGGACCTGATCAT 1137656 29 100.0 32 ............................. CCGATCCCTGTCATGAGGGCGGAGACCACGAC 1137717 29 100.0 32 ............................. GCGTCGCGTCCCGGTTTCATCACCACCGCCCA 1137778 29 100.0 32 ............................. TTTCTTCACGGTGCCGAGGTGCTGGAGATCGA 1137839 29 100.0 32 ............................. CCCAGCGCCGAGCCCGCGAGTACGTCGACGAG 1137900 29 100.0 32 ............................. CCCAGGTCCTCCAGGGGCGGCACCGGCGTGTA 1137961 29 100.0 32 ............................. GCCGAAAAGGACACGAAAACCGGCTCTCATTA 1138022 29 100.0 32 ............................. TTGACCCCGCGGCTGACCGGGGCGATGGTCCA 1138083 29 100.0 32 ............................. ATCGTCCTCGCCGGCAGCGGCGACAACGCCAA 1138144 29 100.0 32 ............................. CGCCGACGTTCCTTGGCCTCCAGCCGGGCGAG 1138205 29 100.0 32 ............................. CGCACCCGCCGGCTGACGCTGATCGCCAACCG 1138266 29 96.6 32 ............................C GCACGGGCAGCCTTGGCAGCATCCTTGATCGC 1138327 29 100.0 32 ............................. TCCACATACCAGCGCGTCGCCAAGCACCGCGC 1138388 29 100.0 32 ............................. CCGAGAGCGCCCGGGCGGCTGAAGCGAATGCC 1138449 29 100.0 32 ............................. TCGTCGCGGATTTCCGGGAGCTTGGCGCCGAC 1138510 29 100.0 32 ............................. TCGACCAGGTCGAACCGGTTGGCCAGGTCGTC 1138571 29 100.0 32 ............................. CGGATGATGTCATTGCCGTGTTCTGTCAGGAA 1138632 29 100.0 32 ............................. TGCCGGGCCTCGAGGCGACGATCCTGATGGAG 1138693 29 100.0 32 ............................. GGGTTCGCCGCAGCCCGAGAGATGAAGAACGG 1138754 29 100.0 32 ............................. GGCTCAGAATAGGTGGCCAGCTTGTCGTTACT 1138815 29 96.6 33 ............................A GCATCTCATTCGTGCTGACCGAGGCGCTGCGCC 1138877 29 100.0 33 ............................. CAGATCAGCGGCATCGCGGCGCTGTTCCAGGAT 1138939 29 100.0 32 ............................. GTATTCGAGGCCCGGTCGGCGTCATCGACGAT 1139000 29 100.0 32 ............................. TCGCGGTTACTCGTGACGGGCAGCTGTGGCGC 1139061 29 100.0 32 ............................. CCAGGGTGCCATCGATCGGATCCTCGACAAGT 1139122 29 100.0 32 ............................. ACATCGGCCTGCCCCTCCTTGTCGACGTTAAA 1139183 29 100.0 32 ............................. CCGGTGACGACCCCGGCGGATTGACGGTCGAT 1139244 29 100.0 32 ............................. GCCGTGCGCGCCGGGCTGGTCAGGGCAGTGTC 1139305 29 100.0 32 ............................. GTCTGGCCTCCATGTTCATGGCGTCGCGGCCG 1139366 29 100.0 33 ............................. TACCTCGCCCGTCACCCACTTCCGAAAAGGTTT 1139428 29 100.0 32 ............................. CGCGAGTGTTGCCGCACATAGACCGCTTGGCT 1139489 29 100.0 32 ............................. TGGCAGAAGCCGGGGCCGGGCTGCTCGACAGC 1139550 29 100.0 32 ............................. ACCGGCCACGCAGATCTCGCGTGGGCGACGAT 1139611 29 100.0 32 ............................. CGCACGCGGACGTTGTCGGCGGTGCCCATCAG 1139672 29 100.0 32 ............................. ACGATGGCCAAGTCGGCCATCGCCTCTTCCAC 1139733 29 100.0 32 ............................. GAATAACACGCCCAGTCGTCCTAGCAACTGCC 1139794 29 100.0 32 ............................. AACACGCCAGATGGTGCGCAAAGTCTTGCCAG 1139855 29 100.0 32 ............................. GACGGCCTTGACCTGCTTCGCGTAGCGATACC 1139916 29 100.0 32 ............................. ACCCCCAGGCAGTCATCCATGGTCGAGTAACC 1139977 29 100.0 32 ............................. CTGCTGCGCGGTCGCTCCCTGGTCTACCTCGA 1140038 29 100.0 32 ............................. GCGCGCAGCTGCTGGAGGATCGGCACCATGGC 1140099 29 100.0 32 ............................. GTCGGTCGTTCTATGTCGGCAAGCAGGCGGGT 1140160 29 100.0 32 ............................. GGGGCCGCTCGCGGTCTGGATCTCGCGTTGAA 1140221 29 100.0 32 ............................. GTCGCCGTAATCCCCTGCACCGCCAACGCCAG 1140282 29 100.0 32 ............................. TATCAATATCACCTACAACTATGCGCCGCACT 1140343 29 96.6 32 ............................A GGCGAATCGCGAGGTCCACCTATTCAGCGGCC 1140404 29 100.0 32 ............................. AGCTGGTTGGAGTTGGTCAGGGCGTTGTCGAA 1140465 29 100.0 32 ............................. CCCGGCAGTTCGCCGTAGGTGGCGATGTACAG 1140526 29 100.0 32 ............................. CCGGAGATCAGCACCGGCCCCCGCATCATCCC 1140587 29 100.0 32 ............................. GAATTGTCAGGAAACACCAATAATGCAGGAAT 1140648 29 100.0 32 ............................. GACGCCGCCGAGGTCTACGGCTTCACCGGGCA 1140709 29 100.0 32 ............................. TCGGGGTGGTGGTCGCTCCACTGAATGGTCGG 1140770 29 100.0 32 ............................. GTCCAGGCCAACGCCTACAACCCCAACGCTGT 1140831 29 100.0 32 ............................. GGGGCACGACAGAACGAGATGGTGTTGAACAA 1140892 29 100.0 32 ............................. GCTTCCTGGCTCTGTCGCGCCTCAGCGATCGA 1140953 29 100.0 32 ............................. CTGTGACCCGAATCCGCGAGCAGTACCAAGGA 1141014 29 100.0 33 ............................. AAATCCTCGAACGTTTGGCTGAGCGGCACCTGC 1141076 29 100.0 32 ............................. CACTGGGTGACGCCGGATTCTCTGGCGCTGCC 1141137 29 100.0 32 ............................. CACTGGTTCACCACCAACGACGGCGGCGGCAA 1141198 29 100.0 32 ............................. ATCAGTCGGGTGGTGTGGTGCTGCCCGGTCTC 1141259 29 100.0 32 ............................. CCAGGGCGTGGTACAGCTCGCTCACCTCGGGC 1141320 29 100.0 32 ............................. ATCATCGTGCCGCGTACCGGCGGTGTCGGCTC 1141381 29 100.0 32 ............................. TGCTTGCTGTAGTGGGCCGCCTTTTCGAGTAA 1141442 29 100.0 32 ............................. CAGGTCATGCATTTTGTTGAGACGTTCGATAT 1141503 29 96.6 32 ........................T.... GTTCTCCATGAGCGCGACGAGGCGAAGGGTGT 1141564 29 100.0 32 ............................. CCCAGCCGATCCGCTTGATCGGCGACCCAGCG 1141625 29 100.0 32 ............................. TACCCTCGCTGGGTCTCGGATGCCTTGCGCTC 1141686 29 100.0 32 ............................. GCCGGCAAGTAATGCTCGGCGACGACGACTGG 1141747 29 100.0 32 ............................. GACGCCCGCTGCCTGAACGACATCCTGGCGGA 1141808 29 100.0 32 ............................. CTCACCGGCGATAACCCGGTTATCGTCCTCAT 1141869 29 96.6 32 ............................A TTCCCGCTCCTCCTCACATCGACCCGTCATGC 1141930 29 100.0 32 ............................. TTCATCCGCACCAAGAATCGGCTGGTCTGGTA 1141991 29 100.0 32 ............................. GCTTTTGTGCCTGTACTTCGACGACATCGAAA 1142052 29 100.0 32 ............................. CCACCGCTCGTTGTTCAGGTACGTGGTCGGGT 1142113 29 96.6 33 ............................A GAGATTCACGACATGCTGCTGGACATCATGGAG 1142175 29 100.0 32 ............................. GTCGTGGACATCCCGCGACAGCTTCAGATCGA 1142236 29 100.0 32 ............................. CAGGCGCTGATGACGATCGTGGACGATGCCCA 1142297 29 100.0 32 ............................. GTTGCCTGCTGTTGCCGTTTGTTGCCTGAGCG 1142358 29 100.0 32 ............................. GCCGGCATTGATCGTCTCGATCAGGAAGATCG 1142419 29 100.0 32 ............................. CCCGGTCATCTTGTGGACGGCTTGCTGTTTGC 1142480 29 100.0 32 ............................. GCGCGCGCTCAGGCATGGGCGAAGCAGGTCGA 1142541 29 100.0 32 ............................. CCAACGTCTGGCCACCATTGCCGAGCGCTATG 1142602 29 100.0 32 ............................. CCCTTCCCTTGGCTTCATAGTCGCTGGTTTCA 1142663 29 100.0 32 ............................. TCAGGGAAAAGCGAGGTCCGCAGGTGGAGGAT 1142724 29 100.0 33 ............................. GAGCACCCAATTGGAGGGAGGGCCGCATGCCTG 1142786 29 100.0 32 ............................. GCCGTGTAGACGCTCAGGAGCGCTCCGAGATC 1142847 29 96.6 32 ............................C GCCGTCTTCCGACTGGAACTTCCCCGCCAACG 1142908 29 100.0 32 ............................. CCGGGGTGCTTGTAAGCCGACCGACCCCAACG 1142969 29 100.0 32 ............................. CGGATGATGTCATTGCCGTGTTCTGTCAGGAA 1143030 29 100.0 32 ............................. TGCCGGGCCTCGAGGCGACGATCCTGATGGAG 1143091 29 100.0 32 ............................. GGGTTCGCCGCAGCCCGAGAGATGAAGAACGG 1143152 29 100.0 32 ............................. CATTACCCGCCTGACCCACTCTAGGAGGATTG 1143213 29 100.0 32 ............................. TAAAGCTCGACGCTCATGTCACTGGTCCGGAC 1143274 29 100.0 32 ............................. ACGCGCACGCCCTGGTCTCGCAGGCAGCGCGC 1143335 29 100.0 32 ............................. GCATCGGGACGCTGGCCGAGTGCCCGGTTGAT 1143396 29 100.0 32 ............................. CCAGGGATGCTCTACAACTTCAGCCCGGACCA 1143457 29 100.0 32 ............................. CCACCAGCGTGTAGTCGGCGGTACCGCTGTCC 1143518 29 100.0 32 ............................. TCCTATGAGCAGGACGGCAAGGGGATGGAGGA 1143579 29 100.0 32 ............................. ATTCTCAGCCGCGCTGACCAGCGTGAAAGCCC 1143640 29 100.0 32 ............................. CTGGTCGACTGGATCCGCAACGACCAGCGCCA 1143701 29 100.0 32 ............................. GCCGCAAGTTCGCCCAGGGCGGGCTGTTCACC 1143762 29 100.0 32 ............................. ATTTCCGCCCATACGTAGTCGCCGCTCTGGGA 1143823 29 96.6 32 ............................T CAGGTAGTCCTGGCCGTGGCGCTTATCGATCT 1143884 29 100.0 34 ............................. AAGGGGCGTTCGGTGGCCGAGTTCGAGCAGCTTA 1143947 29 100.0 32 ............................. GTGAAGCCCGGCACGCTTGTCGGGGCTAGGCG 1144008 29 100.0 32 ............................. GACTGGACGGCCTTCGCCGACGCCGCCGACGC 1144069 29 100.0 32 ............................. GGCTTGCCGTTGACGTTGACGGTGTCGGACCC 1144130 29 100.0 32 ............................. GCGTCCAGCTTGGTCTCCATGCGAGCCAGGGT 1144191 29 100.0 32 ............................. CGCACTGGCGTCAGCTTCCAGACTGCGCACCT 1144252 29 100.0 32 ............................. CACTTTTGGCGTATTGGCCCAGTAGGCTGGAT 1144313 29 100.0 32 ............................. CTGGTTGGCGAGAGACAACTCATCATGACCAC 1144374 29 100.0 32 ............................. CGATAGCCGGTCACGCGCAGCGTCCGGCCGGC 1144435 29 100.0 32 ............................. CCGCCCGCGACGGTCAGCGACAGGTCGGTGAA 1144496 29 100.0 32 ............................. GATCAGGCCAAACGCCTGGAGCAGCTGGTCAG 1144557 29 100.0 32 ............................. AACACGGTGAACCTATTCCATTTGGCGTTGGA 1144618 29 100.0 32 ............................. CAGCGACGCACATCTCGAAGGACGTCCGCCAG 1144679 29 100.0 32 ............................. CTGTGGGATGGCATCAAGGGCGCTGCCGAGTG 1144740 29 100.0 32 ............................. GCCGACGCTCAGGTGGGCTGGTCTGCTCTCGG 1144801 29 100.0 32 ............................. GCTGTCGTGGTCGCCGCGGGGTGATTGCGGCT 1144862 29 100.0 32 ............................. GACAGCGACGCCGCCAAGACTGGGCTCGAGAC 1144923 29 100.0 32 ............................. AAAGGAGAGCGACACGAGGCCCCCCGCGAAGC 1144984 29 100.0 32 ............................. GCACTCCGCTGGCCGCGCCGTCGCCGGGTTCG 1145045 29 100.0 32 ............................. GTGCGGGGTAGGCTTCCCCCGGTGCGGCGTCG 1145106 29 100.0 32 ............................. GCGTCGACGATCGCCTCGCGGGCGAAGTAGAA 1145167 29 100.0 32 ............................. GGTTCTGGCGCGAACTGGAGTTCAATGAGTGG 1145228 29 100.0 32 ............................. CGCCTCGGCCTGGCCTTCAAGGCCATGGTGGA 1145289 29 93.1 32 ..............T..........G... TACGGGTCGATGAAGGCGCTGCCGCACGAGAT 1145350 29 96.6 32 ...G......................... TGCATGGCGAAGCCCTGACCTGGTCGACCGGC 1145411 29 96.6 32 ....................A........ AACACCCACCTGAGCCGCGAGGTTCGCGAGGT 1145472 29 100.0 31 ............................. AACACCCATCTGAGCCGCGAGGTTCGCGAGG 1145532 29 93.1 32 .............AT.............. CTGCTGCGCAGCAAGGCGCGCAAGAACACCGC T [1145534] 1145594 29 86.2 0 ...G.....................T.GT | ========== ====== ====== ====== ============================= ================================== ================== 163 29 99.6 32 CCGATCCCCGCAGGCGCGGGGATAACCCG # Left flank : GGCGAGATCGAGCCGCCGCCTCCCGCTCCGGAAGCGGTACCGCCGGCGATCCCCGAGCCGGAATCGATCGGCGATAGCGGGCATCGGAGTAAGTGATATGGCAATGGTTGTCGTCGTGACCGAAGCGGTTCCACCACGCCTGCGCGGGCGCCTGGCCGTCTGGCTGCTAGAGATTCGTGCCGGCGTCTACGTGGGCGATGTCAGCAAGCGGATTCGCGAAATGATCTGGGAGCAGATCGAAGCCCTGGGCGAGGAAGGCAATGTCGCCATGGCCTGGGCGAGCAATCATGAGTCCGGCTTCGAGTTCCAGACTTATGGTACCAACCGTCGTGAACCCGTTGATCATGATGGCCTGCGCTTGGTGCGTTTTTTACCGCCAGAGCCAACTAGCTGATTTTTAAGGCTCTTTAACAATGCAGTCTGGTCAAAAAGTGATCAAAATCGCTGGTGGAAACCCCGCTGGTGATTTTCTTCATTATAAACAAGTGGCTACAATTAGT # Right flank : TTTGCGTTCGCTGCCGCCCAGACAGTCCAGAAAGCAGTTCCTGCTGTAGGAAAATACGTCTCGAGAATACGAGCGTCTTTCCACACAGGGAAAAGACGCTCATTTTTCTATCCACGCCTGATCGGGGCGGGCGGTGTAGATGGTTGAGGGGCCGATCCTTTCGCAGACGTTTCGGTGGAATCGTCAGTGGCTTGCGTTCTGGTATTCAACCGTCGATCGATATGAGCGAGAAGCAGCAGTTGCAGGGCGAGGAAGCCGAAGCAGGTGGTGACACTGAGTGCCATGGGGGCGTACTCGAAAACGGCGGATGCCGCTCGTGGAGTATAGCCGGTGCAGGGCGTTCGGCGAGGGCGGTCAGCCCGCCGGAGCGGGCTGCGGGGCTCAGTGTTCGTCGTTCTCGAAGCGCTCGGCGGCGCGCAGCGCTTCGTCCTGGGTGTCGTGCTCGGAGACGACATTCTCGTTGTCGGGCTGGCTCTCGTCGATCACGACCCAGCCGGTGA # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGATCCCCGCAGGCGCGGGGATAACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA //