Array 1 12311-8852 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMTI010000027.1 Eggerthella lenta strain 1001713B170221_170320_C4 NODE_76_length_18458_cov_45.5417, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 12310 33 100.0 36 ................................. CGGAATATGTGGAGCGATACTAATTCAAAAGGGGGG 12241 33 100.0 33 ................................. AAAAAGTACGGCACCCCTTGCGACGCGACAGAA 12175 33 100.0 33 ................................. TGTTAAGGAGGTGAGCCGATGACCAAGGCTAAC 12109 33 100.0 33 ................................. ACACTATGCACATAATACTTGCGGCGTACATAG 12043 33 100.0 32 ................................. CGATGGTAAGCCTGTCAAGCCCCTTGCCGAAC 11978 33 100.0 33 ................................. ATCGTCCATAGCGTCAGCCTGTGCGCCCATAAC 11912 33 100.0 33 ................................. AAGTGGATTATGCGGCTTTATGTAGGAAATATG 11846 33 100.0 34 ................................. AAAGGGGGTTCGAAATGACTACGAAACTTGACAA 11779 33 100.0 35 ................................. CGCAAATCCGCTTCGCTGCGTATCTGCTCGGGGAG 11711 33 100.0 34 ................................. CAACAAAATAGCCCCCGCCATCTGGTTGTGACCG 11644 33 100.0 33 ................................. TTGACGCAGATGGTAGCGCCCCCTGAGCTGATC 11578 33 100.0 34 ................................. ATCTCAAAACTATGCCATAGCCTCGCGCGCCCTG 11511 33 100.0 35 ................................. TTCGATAATCTGCACTGTATCTACCATATCGCCAT 11443 33 100.0 33 ................................. CCAGAGGGAATGAACGTTGGAGCACGTGAACGT 11377 33 100.0 36 ................................. TGGATCAACGCGAAGCAGCCGTTCAGCCTGGCATCG 11308 33 100.0 34 ................................. TGGTTTGATCTCCGGCATCTCGAATCCCTCCATC 11241 33 100.0 33 ................................. CAGATTATGACGGAGTTCTCGATGGTGAGCGGG 11175 33 100.0 34 ................................. CCGAATCGTGCCACCCTCACGTCACGTGGGATAA 11108 33 100.0 34 ................................. GATTCTGCCCACAGGGCGTGACCTGGGAACTCGA 11041 33 100.0 34 ................................. CAGTATGCGGAAGTCACGAACTTCACCGGAGCCG 10974 33 100.0 34 ................................. ATGCTTATATTGAAGGACAGCCCCGCCAGATACA 10907 33 100.0 35 ................................. TGATACCACATGCCCCCGTATTGCATGGCGTGCTG 10839 33 100.0 35 ................................. TATCACGCTATGCGCGATCTATCCTAGCTTGCGGC 10771 33 100.0 35 ................................. AGCATCCACAATGCCGAAACAGCTTTTTGATTTGG 10703 33 100.0 33 ................................. AACATGCCTAAAATCTCGTTAATGCTCATAATA 10637 33 100.0 33 ................................. GCGTATTTGTGCGCGGCGGCGATAGCGGCGCTG 10571 33 100.0 35 ................................. ACCTTACCGCCGTGCTGCACGACGGGAACACCGTT 10503 33 100.0 34 ................................. AAGATCGGCGACGGAGCGGGCGTATCCCGCTTGC 10436 33 100.0 34 ................................. TTACGCACGCGTATCTGGAGGGCACGACCGACTT 10369 33 100.0 37 ................................. AAACACTAGCAAGGAGAGTGTATCATGCCCAAGATCG 10299 33 100.0 34 ................................. AAGACCTGCGACGCGGGCAAGGGTTATCTGCCGC 10232 33 100.0 33 ................................. TACGCCGCTACGGTGCAGCTATGGCGCGGCACC 10166 33 100.0 34 ................................. CAGATCGTCTGAGACGTCGATGCCCTCGCGCATG 10099 33 100.0 34 ................................. CCGCCACCGGCAACCGCATTCGCCAGCTCAAAAC 10032 33 100.0 33 ................................. AGTTTTGGAATTCTACAAGAGGAAAGACGCTAT 9966 33 100.0 32 ................................. CGATGGTAAGCTCCGTCTTTGTCGAAGACAGA 9901 33 100.0 34 ................................. AGCAAGCCCGCACACCCCGACACACGGGAAATTG 9834 33 100.0 34 ................................. TTGTCAAGCTGATAGGCAACCTGCACGGGCTGAC 9767 33 100.0 36 ................................. ATCTGATAGAACTTGCCCATGTTTGATATGAGCGTT 9698 33 100.0 35 ................................. TACGTCAGCGAGCTGCGCGACGTCAACGGTACCCC 9630 33 100.0 34 ................................. AAGCCGTTTGTAATCCCTATAAGCCGTGTACGGT 9563 33 100.0 33 ................................. TTAATCTGCAACGTGGGGAGGTGGTCGGGCTTC 9497 33 100.0 34 ................................. ATCGTGTGCGGGACGAACGACGACAAGCTGGACG 9430 33 100.0 34 ................................. GAGGACGGTGTGGATCCATTACGACATCACCGGG 9363 33 100.0 37 ................................. GAAAAGCTGCACCGGCGTGCCGACCGTGATGCCGTTA 9293 33 100.0 36 ................................. GGCACTGACGTGAACGAAAGCGTCAAGGCTGCAAAC 9224 33 100.0 33 ................................. CCCACCGCGATCACCCAGAACGTCGAGTACCTG 9158 33 97.0 33 .............C................... ATGTCGGGGAAAAGGCGCGAACCCATGTAGGCG 9092 33 100.0 38 ................................. CAGGTAGGCGTTGACGGCCTTGTCGTTGGCCTCGGCCA 9021 33 90.9 36 ..T...T...................G...... GGCACCGCGGTGTACTCCGTGCTCGAGAACGCGCGG 8952 32 93.9 34 .................-..............C TGTTCGGGTTGGCTGGCAAGCTGAACGCTGACAC 8886 33 75.8 0 .....GTT.A..T.....C.C..........G. | C,T [8870,8882] ========== ====== ====== ====== ================================= ====================================== ================== 52 33 99.2 34 GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Left flank : TGCGCGGCGATCTAGATGGCTACCCGCCGTTTCTATGGAAGTGAGATGGTTGGCATGCTGACAGTGATTACCTACGACGTGAATACCGAGGATCCGGCGGGCCGACGTCGCTTGCGAAAAGTGGCGCGACATTGCGTCAATTACGGTCAGCGTGTCCAGAACTCAGTGTTCGAATGCGTTGCCGATGCTGCGACGATGGTTCGTATCAAGAGCGAGCTCGTCGAGCTGATCGATCCGGAGAAAGATAGTTTGCGATTCTACAGTCTTGGAAGCAAATATGAGACGAAGATTGAGCATGTAGGTGCGAAGCCAACGTACGAAGCTGAAGGGTTCTTGGCATTGTAGGACCATGGTGCGAGCACGAAGCTCGCATATGACATACGTGAGGTTCGCACCAAATAGTGTGACATAAAGATGCCTGACGCGCTTGTTGCGTGTACCTTGTTTGTCTAATGACACTATATGTTGATCGAAGCAGTAAATTTGCACATAATATTGCG # Right flank : CGCGCGCAGCTGTCGTGGTACGGCCGAGGCGTGGTCGGTCGTACCCCTCGCGGGCGCGCGGGTAGAAGCAGGGTATCCGGGTTGAAATCGAGCAGCGTTTCGGCAGGTTCTGTCGCTCCCTAACGAAGGGGCGACCGATCCTTGCCGTCGCTTCCTATCGAGAACGCGGATTGATTCGCTGATTCCGAGTTTTGCTCGTCGGACGTCTGCGCCGAGTTGCGAAAGGCGCAGACGTCCTTCGGATCGCTACTCCACCACCAAATCAACGAACTCAAACGTCGTGCAGTCAACCAGGCCGCGGTTCGTCAGGCGCAGTTCGGGCAGGCATGCTAGCGGGATCAGGGCCATCGTCATGAACGGCGACGGCATGGTGCAGCCGATCTCGGCCCATGCGCCCTCCAAAGCATGTACCTTCTCGCTCATCGTTACGGCGTCGAGCGAGTCCATCAAACCGGCGATAGGAAGCTCCACCAACCCCAGGATCTCCCCGTCGGCGACCA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.20,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //