Array 1 12884-16151 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACAXD010000025.1 Acinetobacter sp. SwsAc5 Scaffold25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 12884 28 100.0 32 ............................ TTAAACAGTCTATTTTTTACAATAGCCGTATA 12944 28 100.0 32 ............................ TGTTTCAGATGATGAACTTAAAGAAAATTTAG 13004 28 100.0 32 ............................ GTACAGAAACTTTATCTAGGAAGGTTCTGCAT 13064 28 100.0 32 ............................ ATCAAATTTTTGATTCGTGTCTTTGCGGTAAT 13124 28 100.0 32 ............................ ACCACCCATTTTAGCTAATCTTGTTCCCGAAC 13184 28 100.0 32 ............................ CATAGTCGCAATATATTTTTCCTCTTTTATTT 13244 28 100.0 32 ............................ TTGCTCAATGGCTGAACTGGTTAAGCTATCAA 13304 28 100.0 32 ............................ AAAATGAATCTTCACCATCTGCGGGATACATG 13364 28 100.0 32 ............................ TTACCACTATTTAACCACTATTTAACCACTAA 13424 28 100.0 32 ............................ AGCATGCGTGCCTTGTAATTCCAATAAGTCCT 13484 28 100.0 32 ............................ TTTCAACATTCATGATGTCTTTGGCGTACTGC 13544 28 100.0 32 ............................ TTTACCTGAACGAGTTGGAGCAGCCACAAAAG 13604 28 100.0 32 ............................ ACTTGATTGCGAATAACATAAAAGGTTTCTGA 13664 28 100.0 32 ............................ AAGTGAAACAATTGCGGATTTATCTAAATTAA 13724 28 100.0 32 ............................ ACCACGCACACACCACTCCATAAATGCAGGGC 13784 28 100.0 32 ............................ AATCGCTGTTTGCTTTTATATAACTCAGCTAC 13844 28 100.0 32 ............................ TTCCACTTGTTCATCTGTCACTAGAATTTTGC 13904 28 100.0 32 ............................ AATATTACGAAGATAAAGACACCAATGCAGCC 13964 28 100.0 32 ............................ AAGACGCTACATGAACAAACTGAACAGCCAGT 14024 28 100.0 32 ............................ TACAGTTTACTTACATTAGAATAATAATCCTC 14084 28 100.0 32 ............................ ATCTTCGGCTTTTGGTGCAAATAAAAAAACCT 14144 28 100.0 32 ............................ CAACGGAAACAATTGTAGATTTTTCAAAACTG 14204 28 100.0 32 ............................ TACCACATTTAAATAATGTTGTAGATTCTAGT 14264 28 100.0 32 ............................ TATTTCCAATATGTCAATTAATATGGCATTAC 14324 28 100.0 32 ............................ ACAAACTTTAGCAGCTGTGAATTCGCATGACT 14384 28 100.0 32 ............................ TACCGCACCATACCCACCTGTAGCTGTTACTT 14444 28 100.0 32 ............................ CAAAACCACAGGCACAAAAAAAGCTCAACTGT 14504 28 100.0 32 ............................ TAGTTCTCTTTGCTCTGTTCTTCGGACTGTCG 14564 28 100.0 32 ............................ AGCCATTCAGGACGCAAGTCATTGGCCATGTT 14624 28 100.0 32 ............................ CATTTGAGCATTCCAATTGCACCCTGCGCTTT 14684 28 100.0 32 ............................ TTACCGTTCACGTCAAGCTTGATGTACTTTTG 14744 28 100.0 32 ............................ GTTCCAGTAGTCGCTAAGATTTGGCTGTATGT 14804 28 100.0 32 ............................ TTTGACCAAATTTGCGTACACTCATTCACTTT 14864 28 100.0 32 ............................ ATACCAAGACAAAACTTATAACAAGGCAAACG 14924 28 100.0 32 ............................ TGATTCAAAAACTTGGTGCTAAATGCCTAATT 14984 28 100.0 32 ............................ TGCAAACGGATATTTCTACTGCCTATTGGGTT 15044 28 100.0 32 ............................ AACTCAAACAAGATGTAGCCATTGTTCAAAGT 15104 28 100.0 32 ............................ AATTAAGGAAATTACGTCAGCACACATATTCA 15164 28 100.0 32 ............................ AAAGGACATCATCTTCTTGTGGCGGATGACAT 15224 28 100.0 32 ............................ ATCTGTTCTTTTTGGATGTACTCCATTGGATA 15284 28 100.0 32 ............................ CCACGGTGTATTTATACGTTTGCCACTCATCT 15344 28 100.0 32 ............................ ACTGGATGGTGTTGGTGAACTGTAAACACAAT 15404 28 100.0 32 ............................ TGTATCATCTTGCGTTAAAACTCCTAAATACT 15464 28 100.0 32 ............................ GTCCAATTGACGCGCTGTATTTTGATCCGCAC 15524 28 100.0 32 ............................ TTCATACTGCGTCAAACGATGAGTTTTATAAC 15584 28 100.0 32 ............................ TGAATCCTCGCCAGCCTCATTCACAATGTTCA 15644 28 100.0 32 ............................ TGTTTCAAGATTATGTACACCAGAAGCATCGC 15704 28 100.0 32 ............................ TGCGTCATTACGATCTGATTAGAGCCAAAGTC 15764 28 100.0 32 ............................ TGTCTTTGCTAGGCGATTTAAGCCAATCAAAA 15824 28 100.0 32 ............................ ATTGGCCTGTTTTGAGGTTGCTGCATTCATGT 15884 28 100.0 32 ............................ TAAAGCTAAAGGTGACACATGAATATCAAGAA 15944 28 100.0 32 ............................ ATTGACCACAATCTTTAAAATTACAGGTTGCC 16004 28 100.0 33 ............................ CATTAAATTCGATTTTGAAGCCTCGATCCCACC 16065 28 100.0 32 ............................ TGCGACCAGTTCAGATGAAATGATGCGTTTAA 16125 27 92.9 0 ........................-..C | ========== ====== ====== ====== ============================ ================================= ================== 55 28 99.9 32 GTTTGCCATCGCCCAGATGGTTTAGAAG # Left flank : GCCGTTGGGCAAAAAGTCTCTATAAACAACTTGCATCGGGTTTAAATTTTGAATTTAGCCGTGAGGAAGGAAAAGGGTCGCATGAGTCCTTACGTGATATTGCCAATAGTTATCTAGATCATGGTAATTACATTGCTTATGGTTATGCTTCTGTCACACTAAATGGTATGGGAATAAGTTTTGCCTTACCTATTTTGCACGGTAAGACACGTCGTGGTGGTTTAGTTTTCGATATTGCAGATTTAGTAAAAGATGCTTTTGTTATGCCACAAGCGTTTATTTCTGCCAAAAATGGACATAATCAAAAAGAGTTTAGAATGCAACTGATTGAATCCTGCCAAGATCAGGATGTCTTAGACTATATGTTTAACTTCATTTCTGAGCTATGCAATAAAATCAAATGATTTCAAAAGTTTATTGATTTTTGTTTTTTTGATCTATTTTCACTCTTTAAAAACCTATATCATTATTATCTAGAGCTTTTTATGATAAAAGTTCTA # Right flank : CATTACACCCCTTATTATCAATCAAATTAATTTTCAAAGTAACTCTAAATAACGATGCACCCAATCAACCGAAATGCGCTCTTGCTCTAAACGCCTATTTTTAAATGTCTGTGCACGCAAATCATGAAATAATTTTAACTCGTCAGCAGTGAGATATTGTGGCTCACTAAAAATAGAGTCTGGTTCATCCACCATATGATTTTGGAACTGTAAAACTGTGGCTTCATCCATCATTAAAGCAATCACGTGTGGAATTTTTTGCCGAACCATACTTAAAATATTTAAACCTTCAGAGTCGATATCTCCCCAATAAAAAACCTGTTTATACTGTAACCACTTGGCCTTCATCCATGTAATATTTTTACCCCCACCACAAACCACAATACTATTTTCCAAGTAAGGGCACGCTAAACCTGACTGAATATTTTCAACTACAATTATTCGTTCCGCAGGTAACTCAAATTGATCTAGCACCTCTGTGGACAATTGAAAAACGGGGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCCATCGCCCAGATGGTTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTGCCATCGCCCAGATGGTTTAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.20,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 4038-1253 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACAXD010000033.1 Acinetobacter sp. SwsAc5 Scaffold33, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 4037 28 100.0 32 ............................ AATAAAAAAATAGAAATGGATGAAATCCGTAT 3977 28 100.0 32 ............................ AATAAAAAAATAGAAATGGATGAAATCCGTAT 3917 28 100.0 32 ............................ CCCTATTTTTTGCTTCTAATCGCTATTCTAGA 3857 28 92.9 32 ...CA....................... TATTTAAAGCTCAATTTTGGCAGTGGTAAGTA 3797 28 92.9 32 ...CA....................... ACTTAAAGTTGACTAAAGACTCTTTAGATTTA 3737 28 92.9 32 ...CA....................... TCTTTGAAAAATAGGTTCCCAATTATTGGTAA 3677 28 92.9 32 ...CA....................... GTAAGTAGCAAATTGCATAGTGGTGAACAAGT 3617 28 100.0 33 ............................ TCGCCTGCGGATCGTCTTTCGCTGCTGTTCTGT 3556 28 100.0 32 ............................ TTGCAACCGAAGTCGGATGCAAAGGCTTGTGA 3496 28 100.0 32 ............................ TTGTCCAAATACACCACCACGAATTAGGACCG 3436 28 100.0 32 ............................ GAAAGATTTGGAGCTTGATGCTGTGGTTGGAG 3376 28 96.4 32 .........................G.. TTATCTGTAATGATGATAGGGATTTCACATTT 3316 28 100.0 31 ............................ ATCAATAACATGAAATAGTAATGCCAACCTA 3257 28 100.0 32 ............................ ATTCATAATTGACAAAGAAATTACCCAAAAAG 3197 28 100.0 32 ............................ AGAAGTGCAGGCTGATGTTTTTAGTCAGTCAG 3137 28 100.0 32 ............................ GCATTGCTACTTAAAGCACTAGCAATATTCAA 3077 28 100.0 32 ............................ AACACAAATTACATGAGCAAAGATGTGATTCA 3017 28 100.0 32 ............................ CTAGTACCTCGCAATACTCTCATAAGCCCACC 2957 28 100.0 32 ............................ TTGAGTGGGAAAAGGCCGTCAGAGCGCAAATA 2897 28 100.0 32 ............................ TGAAATACAGGCTGAAATTGACTTGATCTACG 2837 28 96.4 32 .........................G.. TTGCTATATAAGGCTTTCAGAGGACATACAAT 2777 28 100.0 32 ............................ ACATAAATATGGAGACATGCTTTTATTCTAAA 2717 28 100.0 32 ............................ GCTACTTCATGTAAATATTTGGTAATGGCGTA 2657 28 96.4 32 ...A........................ AAAGCAGAAATGTAAAATATATTGACTTGTAT 2597 28 100.0 32 ............................ GTATCAATATTACGTCCGTGTACTTGGGTTCA 2537 28 96.4 32 ..........................T. ATTTAACCGTGGCTCGGTACGCTTTGATGGGA 2477 28 96.4 32 .......................G.... TCAACAACAGGACGTATTTTTATACCGTGAAA 2417 28 100.0 32 ............................ CATACATACATCAAACAGATAGGTCGGGTTAA 2357 28 100.0 32 ............................ AAATGAAACTCGAAGAAGGGCTAATACTCATA 2297 28 100.0 32 ............................ AAATCGTCTGTTTTCCTCTCTGAGCGAGTTCA 2237 28 96.4 32 ....A....................... TATTAAATTTTCAAAAGAACGTCAAGCTCATG 2177 28 100.0 32 ............................ GCAAGCAAAGTGCGATCAACTAAACATTTGCT 2117 28 100.0 32 ............................ CATACATACATCAAACAGATAGGTCGGGTTAA 2057 28 100.0 32 ............................ AAATGAAACTCGAAGAAGGGCTAATACTCATA 1997 28 100.0 32 ............................ AAATCGTCTGTTTTCCTCTCTGAGCGAGTTCA 1937 28 96.4 32 ....A....................... TATTAAATTTTCAAAAGAACGTCAAGCTCATG 1877 28 100.0 32 ............................ GCAAGCAAAGTGCGATCAACTAAACATTTGCT 1817 28 100.0 32 ............................ TCTGATGTCAGGCGTTTTTCCAGTATTCAACG 1757 28 100.0 32 ............................ CAGAAAACATCAATCTGAAAGCCAGTGAGAAT 1697 28 96.4 32 .......................G.... TATTGCAAGCGGAATAGCTGCATTCAATGAAA 1637 28 100.0 32 ............................ TGTGCGGAAAAATGATGACACCATTGCTCATT 1577 28 100.0 32 ............................ CTTAGGTGAGTCTACTATTTGGGAAAAAGTAC 1517 28 100.0 32 ............................ TTGAGTGGGAAAAGGCCGTCAGAGCGCAAATA 1457 28 100.0 29 ............................ AGACTGAAAGGGTCTGTCCTTTTGCCAGT 1400 28 100.0 32 ............................ AAAAAATTTTGGACGAGAATCTACTCCGATCA 1340 28 96.4 32 ...A........................ AACATCACTCTTTCGCAAAACCACGATTCCCT 1280 28 89.3 0 ...A......................TA | ========== ====== ====== ====== ============================ ================================= ================== 47 28 98.5 32 GTTGGTTATCACATAGGTGATTTATTGG # Left flank : CCAAGACCTAAACTTTTTGTTATGGACTCTATGGAAGGGTAGCGTAAACTTTACCATTGGTGGTCATCAAAACCTTGGTTGTGGTGAAGTTCATGCTCAGTGGAATATTATTGAAACTTCATTTGATGATCCAACCCCACGAAAACTAGGAACATTAACTATCAGTGATGACGGATTCCAGTTAGACAAAATTGCTTTTGACCCGAAAGAAATTGATAATGCCATTTCAAATGAAAAATTTGACTTTACTGTTTTTTAAAACAGTAAAGATCGCAACAGCGATTTTAAGGTTAGAGCCGTTATCCAATGGTTAGATACCGCGAATGCGGTTTAGGGTTATTTCTTTGATATGGCAATATAATTGAAATAACCCTTTATTTTTTAACTTTAAAAAAATCCTCTAAATACAATTCTATACAGGAACCGCATTTTAAAAGGGTTTTAAAATGATGTTTCTCTTAAAAACTTAAAATATATAAATTATTTCACCCTTATTCACT # Right flank : CCTCCTAGTGGACAAATCGAATAATTCGATAACACAGAAGTTATTTAAAAAAAGACCGGTTTTGAACCGGTCTTTTTAATATTTAACAGTTAGGTAAATATTCATGAATATCCTAACATTAAGATAGTTATTATGAACAACAAGCGCATGTCGAGTGTGAAGCATTAGATTTTTCTTGTGTTTCTACTTTAGCAAGGATGTTAGTAAGGAATGTTTGTAGGCTCATGAATCCTGCACCGGCACGACTATGGCCACCGCCATCAATCCCAAGTTTAATTAGTGCTGTTGGTACATCTTCGCCGTGCTCTCCTGAACGCAGAGAGATTTTTACTTTATCTGCAAGGATGGTATAGCACATGACAAAAGGTACGCCGTCCATGCCACCAACCAACTCACCAACTAAATTAGTGTGATCAGGAGTCACATTGACCATAGGGAAGGAATATCCCCCCGCATTGACATTCACCAAGCCGTTTTTAATGATTCCTGTCGCATTGCGT # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGGTTATCACATAGGTGATTTATTGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.50,-3.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 1 36695-36547 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACAXD010000008.1 Acinetobacter sp. SwsAc5 Scaffold8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 36694 28 96.4 32 ...G........................ GGGAATAAGCATTCCTCAAAATTTTGCATAAT 36634 28 100.0 32 ............................ AGAGGGGGTATGCAGATTGTGCATACCCTTTT 36574 28 92.9 0 ........................A..G | ========== ====== ====== ====== ============================ ================================ ================== 3 28 96.4 32 GTTCACTGCCATATAGGCAGCTTAGAAA # Left flank : ATGGTGTCAAATGAAAATGGAAAACCTACGACAACCAGTTATGCTATTGCTGAAGCTTTCAATAAAACACACAGTCATGTAATGCGTGATATTAAAAAGATTGTTAAGCAGTGCGGTGAAGAATTTGCTAAATCCAATTTTGGATTAACCTTTGAAAACAAGAAGATAGGTAACACAACAAGAACCACACCGTTTTATCGAATTTCTAAAGATGGGTTTATGTTGCTTGTCATGGGGTTCACTGGTGAAAAAGCAATGAAAACCAAAATAGACTTTATTAATGCATTTAACTGGATGACAGAACAATTAACTCAAGTTGTTCAATCAAAATGGGCGAGATATAACCAAGTTAGTCTCGATCATAAAACAAGAAAGCAGCAAGTCAGTTGTTCAGCTCGTGATATGCGAGCTTGGCAGGATGATAAAGTGGTATTGGAAAATGAACTTGCACAATTGGAAATGGAACTACAACCACAGTTGCAATATTTGAATTAAGTTTA # Right flank : TATAAAAACCCTGTAAGGCTAACGCCTGTAGCCTAGATTGATTAACCATACATGACATACTTATGGGAGTGCGTCATGTCTGAGAAAAAGCCGTGGGAAATGGATTGGGGTAATACTAAACAAGAACAAAACCCTGCCAGCAATTCTAGTGTAAAGCCGTGGGAGATGAATTGGGGTAAACAAGAACCTCAAAAACAAGACAACCCACTGGTACGCGGCTGGAATAAAGCAAAAAACAGCATGGCTATTTCTACTGATCTTGCTACTGGTGATACAGCATCAGCAGCGCAAAAGGTCAAAGAAGCAGATGATTATGCAAAAGCTAATCCAGGCTCCAAAGAGGGTCAGGTTCTCATGAATGCATGGGAGCGAGGAGATGGGATTACTGGAGGTATTTCAGAAGTTGTAGGGCAGATTAAAAAAAATGCTGAAAATTCTGACGGGTTTATTGGAGGTGTTCGTTCTGTAGCTAAAGATGTTAAAGCGATGGGTTCTGGTCT # Questionable array : NO Score: 3.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //