Array 1 2085-1827 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBZI01000018.1 Streptomyces abyssomicinicus strain CHI39, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 2084 37 100.0 38 ..................................... CAGATCGGCACAGGCACCCCGGACAGCACCTACGTCCT 2009 37 94.6 36 ..............T.......G.............. GCCGGTCCCACGCGGACGGTCGTCGAGTAGCCCATG 1936 37 94.6 36 ......................G.T............ CTTAGACGCGAGGGATCCGTCATCACTGCCCGAACC 1863 37 91.9 0 A.............T...............C...... | ========== ====== ====== ====== ===================================== ====================================== ================== 4 37 95.3 37 GTGGCGGTCGCCCTCCGGGGCGACCGAGGGTCGCAAC # Left flank : GCGGAATCCCCACCCTCCCGCCCGAGGCCTCGACGGCCCTGAGCTTTTCCTGCCAGGCGCACGGTCCCTTGCCGACGTCGTGCACCAGGGCCAGGTACTCCGCCAGCTCCCCGGCCCCGAACACCTCCCCGAAGCGCCCCGCCAGCGCCGCTGAACCACGCAGATGGTCCTCCAGGGTGTGCCGCACCTTCGTGACATCGCTCAGACTGTGTGCGTACAGCAGCGCATCGTCTGCCATCGTTCCCCCTCACCAATGCACGGCACAGGTCGGGACCGCGCGCTCAGTACGGACCGTAGAGGGAGGGGCCGACACCTGCCTGGACAAGGTGTGACAGCTAAGCTCACCTCGGCTCACGGAGCCACCGGGTTACTTCGGAACCTCAAGCACACACGCGACACGCGGGTCGCACCGAAGTCGAATGTTCGGAATCACTCGATGTGTCACCCGTGACGCCTTGTCGTTAGGCTGCGGGATACGCCTTTCGCGCTGCTCAGGCAGC # Right flank : CCTGCCGGTGCTGCGGCTCAACGTCAACGACGGCGCCCGCGGCTGCCAGGGTCCTCTCGTAGATCACCGTTCGTGATCTGCATAACGGGACCGGTCGAGGCGCCCCCACGCAAAGTCATGACGACGCCATTCCTTACTCAGGAACGCCGCGAAGTGGTAACAGCGCAGCCCGTACAACTTCCTGGCGCCCAGATCCACCGACCAGTCCTCATTGAAAAGCGGCCCCATGTGATCCGGACCCGAGCCGCAAGAACCGGACCTCGGGGGTGAGCTTTTCCATGGCACGCGCGGGTGGGGCGAAGCTCTGCGTGAGGACTTCCACCACCAGCATGGCGGCAACGACGTCTTCCGCCGTCTCCCAGTGCCCCAGAGGTGTGAGTTTGCTCCCGCGGGCCGCTGACATGAAGCAGTGCGCGGCGGCACCTACCACGCGGCCGACCTTTGAGGGCACTGAGAGGACGACGACCTCGACCGGCCGGAAAGCTGACCGTCATCGCCCG # Questionable array : NO Score: 3.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGGTCGCCCTCCGGGGCGACCGAGGGTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGCGGTCGCCCTCCGGGGCGACCGAGGATCGCAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-16.80,-19.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 8515-10507 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBZI01000018.1 Streptomyces abyssomicinicus strain CHI39, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================================== ================== 8515 37 91.9 37 ...A............AA................... GATGCAGAGTGGCTGACTCCGAAGGTCTACGGCCACA 8589 37 94.6 39 ............T.........A.............. CACGTAAGCGACGCGGCTAGCTTGTCGTCATACGGGGGC 8665 37 97.3 35 ......................A.............. GCCATCAGGGCCGTCCGTGCCGCCGTATCCTCCTT 8737 37 97.3 36 .......C............................. ATCAACCCGCCCGAGCAGTCCGGTGACCCAGACCTT G [8758] 8811 37 94.6 39 ......................A......A....... GGCGGCGTCTACCTCCCGCCCACGGCGACGATGTGGCAT 8887 37 100.0 38 ..................................... TTGGACCACGCCGGCGACAAGGCTGCCCAGCTCGGCCA 8962 37 94.6 35 T............................A....... GTGCCCCTCGCCGAGCACCTCGGCACCACCACCGA 9034 37 97.3 39 .............................A....... GCGTGGGTCCGATAGGGGACACGCTGACCCGTCCCGCAT 9110 37 100.0 39 ..................................... TGGACCAACCGGCCTACTCGCATGGTTCAGGCGGTGGAG 9186 37 91.9 37 ...............T.........A....C...... CTGCAGTCCGAGCCGCGGCGCCAGGACACGGCGGAGC C [9199] 9261 37 97.3 34 ..........T.......................... TTGTACTTGCCGTCGGTCAATCCGTCGTCGAGGT 9332 37 86.5 37 ..........TA....AA...............T... GACCAGTGGGCAGCCCACCACCCGCCCGAGGTGGCCA 9406 36 91.9 66 ..................T.-...........A.... TAGCACAAGGACTACGCCCAGCGGAACCTGGTCGTGACGGTCGCCCTCCAGGACAAGGCAGGCGTC 9508 37 75.7 37 C......C......T..T....A...C..A..C.G.. TACGTGGCGCCGATCGTCTACATCAGCCCGCGGCTGG 9582 37 91.9 39 .......C........A...........A........ CGGTACGGGTACGTCGCCACGATCTCCCGGTCGGTGGAG 9658 37 94.6 38 .......C.....................A....... ACCGTGACGCCGCTCGCCGAGCGCTCCACCCCGGACGG 9733 37 94.6 38 ..........T..................T....... GCCTGGACGTTGACCGTGGCCACCGTCCTCTTCAACGC 9808 36 94.6 37 ................-............A....... GGCAGGTTGTACGTCGTATCCTGCCCGCTGAATGCAG 9881 37 94.6 37 ......................A..A........... CGGACCCTGTGCCGCACGGTGGCGGGCATCATCGCGG 9955 37 97.3 39 .....................A............... GGCGGTTTCGGTCCATACGACGACACCCCCTGCACGGAC 10031 37 94.6 37 ......................A.....A........ ATGGTCATGCAGGGGACCGGTGGCAATGACGGCTCCT 10105 37 97.3 35 ................A.................... ACCGCACTGCGGCCGACCGCCTGGAGTCCGCTCTG 10177 37 94.6 36 .......C..............A.............. CCGTAAACCTTCCGCAAGCCGGGGGAGCGGTGTGTC 10250 37 97.3 38 ...............T..................... GACATCCTCACCCTGCGCACCCTGGACACCATCCAGGA 10325 37 97.3 38 ...........T......................... GTCACCGGCACTCGCACGCTCAAGACCGAGACGTACAC 10400 37 100.0 35 ..................................... CTCGTCAATCACGCCGGGCTGACGCTCGCGCAGAC 10472 36 94.6 0 ..........T.....-.................... | ========== ====== ====== ====== ===================================== ================================================================== ================== 27 37 94.6 38 GTGGCGGTCGCCCTCCGGGGCGGCCGAGGGTCGCAAC # Left flank : TCGGCATCACCCGCGTCACCCCCACCAAGAGCGAGGACCTCGTCAAGAAGGACACCGAGATGGGGTCCAAGCACATCGTCCCCTACGGCGTCTACCGCGGAGAGGGACACTTCAGCGCCCCGCTCGCAGGCCGCACCGGCGTCACCGAGGACGACCTCGCCATGTTCTGGCGCGCCTTCACCCTCATGTTCGACCACGACCGCGCCGCCGCCCGCGGCGAACTCAACCTCCGCGGGCTGTACGTCTTCACCCACGACGACAGGTTCGGCCGCGCCCCCGCCCGCCAGCTCCTGGACCGCGTGACCGTCAAGGGCCCCGGCGACGCCACCGCCCGCTCCTTCAGCGACTACCAGATCGAGGTCCACGACACCGACCTGCCCGAGGGCGTCGCCCTGACCACCCTGATCGGATGACCGTCGCACCACAAGGGGCGGAGAGGGAGAGCTCACCCAGGTCTCCCTCTCCGCCCTGGAGCACTACGTCTCCCCTGCTCAGTCAGG # Right flank : CCACGCCGGCGAAGCCGCACGGGTCCAGCGGCCGCAATCTCAGGCTGCGGCCATCCGGTCCCTTCAGAACGGCAACATGCAGGACGACCGCCGCGGACGTGTACCACCAAGCGGTCAGGGCCACATGCCGCCCTTACTTACCCGCGCCGCTCGTGAGCATCTGGATGGCTTGCCCGCAGAACGGCAACGTCGTGTTCGCCTCGTACGTGTCGCCGCGTCACCGACGTTTCGGAGCCGGTCCCAGGCAGCGCCCGCCGATCGCAACTCGATCCGCGCGGTCAAGAATGGCCCGACCCTGCCGGCCGCAATTCCGGGGTCGGGCCGTCGTAGCAGGTGGCTATCCGAGCCAGATGATGTTCAGGACTGTCAGGCTGTGCAGGGGCCGGTTGATCCAGTAGGTGACGGAGAGCTGGCCGACGGCCGCGTAGCGGACGTCCTCGCCTTCGTCGTCGTCGGCGTCGAACTGCTGGAAGCCCCACGGGTCCGCGGCGGCCGCGGCG # Questionable array : NO Score: 5.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.73, 5:0, 6:0.25, 7:-0.06, 8:1, 9:0.16, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGGTCGCCCTCCGGGGCGGCCGAGGGTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGCGGTCGCCCTCCGGGGTGGCCGAGGATCGCAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-18.40,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [13-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [35.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //