Array 1 24965-24008 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASRV01000202.1 Clostridium sartagoforme AAU1 contig00227, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 24964 30 100.0 36 .............................. GGAGTTATTTCTCCTGGTTTAATTTTGGAGGAATAA 24898 30 100.0 36 .............................. GTTGGTTGTATAACACACACAAGAATTACAAGAGCC 24832 30 100.0 35 .............................. TTTTTAAAACCTCGCTTTAATTATTTTTTATATTG 24767 30 100.0 37 .............................. AGTGCTATGAAAGAGTTTAGAATTAAGATTCTGAATG 24700 30 100.0 36 .............................. ATAATTTTCGCTAAATCTATTTCCTTCACGAGAAAT 24634 30 100.0 36 .............................. GGGAGATGTAGAACTGCAAGAGAATAATTTAGCTGA 24568 30 100.0 36 .............................. GGAGGAAAAACTTTATATAGAGAAAAGGGATATGGA 24502 30 100.0 37 .............................. GCACTATCAATTCTACCTACTGCATCAGTAGTATTTG 24435 30 100.0 36 .............................. CAAGGTCGTGGTTCCTGGCATTGTCATATTTTACTT 24369 30 100.0 37 .............................. ATTACTATAATACTACAAACTACATCTAACATATATG 24302 30 100.0 36 .............................. ATCACTGTCATGATCACTGTTTTGTTCTCTAAAAGA 24236 30 100.0 37 .............................. TAAGTAACGCCATCAGCACCAACTCTAATATCTGTTG 24169 30 100.0 34 .............................. GTAAATCTTCTATAAAACTTCTTTGTATATAATA 24105 30 96.7 37 ............A................. TTCTTTCCTTTTAACTTAACTTCTTTTATGACAACTT 24038 30 96.7 0 ........................A..... | T [24010] ========== ====== ====== ====== ============================== ===================================== ================== 15 30 99.6 36 ATATTAGTAGCACCATATTGGAATGTAAAT # Left flank : TTCAACATCTAT # Right flank : TTTTAGGGTTATATAATAATTATTACGTACTAAATTTTAATAGTAGTAGACCAAAAAGTACTCCTAAGTACCTCTATGCAACTTTGTTAATGAAGATATATGCTCCTTTAAGTGTGAGTGAGGTTTTAGCACATATTCTCATAGGAAAAAATACACGCTATATCAATATGTTAGTAGAGGTTAATAGTAATTTTCTTTTATGAATCACAATTAGAAATTTGTTCAAGGAGAAAATAAATTTAACTAATAAAGAATCACAACTAGATGCTAGAGTTAGAAATAAATCTTGAATCAAATTATTAGGCATCTAAATATATATTAAAAATTTAATAACTAGTGTAATAATATGTTAATATTAATTATAGCCAGTATCCTTAAGGGTAACTTGGACAATATTAGAAACTAGAAAAATATATAAAGAAGAGGATACAATATGAGAATAAATAAAAATATATAATATCTTTTTTAATTTTGTTTATAGTAGAGGCATTAATAGCGCT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATATTAGTAGCACCATATTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-16.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 59-1152 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASRV01000263.1 Clostridium sartagoforme AAU1 contig00289, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 59 30 100.0 36 .............................. TAAAATAGGAAATAAGCAACTATTAATAATAGATAT 125 30 100.0 37 .............................. AAAGATGTGTTGATGGTTATGCAGTACAAGTATTTAC 192 30 100.0 36 .............................. TAGTAAAAGTTCCTGTTCCTGCCATTTTAGACTTAA 258 30 100.0 36 .............................. AACTACATTAGCACTAACATTAACAACCTTTGATAT 324 30 100.0 37 .............................. ATAAAATTCCATCATTTCTAGAGAATGAATATAATAA 391 30 100.0 36 .............................. CGTTGAAGACGTATAACTACTTAAATCTTTTTTTTC 457 30 100.0 38 .............................. GAACGTAATTGAACAACTATACGAGGAGTATTAATATT 525 30 100.0 37 .............................. CTACCATTTCTTATATACTCTAAGTCTTGATCTAAAT 592 30 100.0 37 .............................. ATAAGAATAAAGGGTGCTTAGGCACTCTTTTTGATTT 659 30 100.0 36 .............................. TATGATATTTATAATAATTTAATTTCTTATAATAAT 725 30 100.0 36 .............................. AGCTTATATGCTTACTCTTACTGTTCCTTCTATAGA 791 30 100.0 36 .............................. CAAATTTTTGTTACTTTATCTTTACTATTTGTTTTA 857 30 100.0 36 .............................. GCACAAGCTATTGCTATTGTAGATGATATTTTCTTT 923 30 100.0 37 .............................. ATCCGTGTATATGCCAAGCATTATCTTTATGAGTTTC 990 30 100.0 37 .............................. CTTTTCTATTTTGAGTAAGTAAAGTCATTAATTCAAT 1057 30 100.0 36 .............................. CTAATTGCTCAAAGTTTTCTCTATCAAATACCCTAA 1123 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 17 30 100.0 37 ATTTACATTCCAATATGGTGCTACTAATAT # Left flank : TTCCAATATGGTGCTACTAATATTAGCTTTAGTTCCATTTATAAATCCTTGTATCTTTA # Right flank : TAATTGATCAAGGAAGATATGATATTAAGTGTCCATAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTACATTCCAATATGGTGCTACTAATAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 1248-24 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASRV01000250.1 Clostridium sartagoforme AAU1 contig00277, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1247 30 100.0 37 .............................. ATTATAATTATATTAACAAATCAGTTAGGGCATACAT 1180 30 100.0 37 .............................. TAACCTAACACCTGAATTTGATAAAACAAAAAAATTA 1113 30 100.0 37 .............................. CAACTCCTCGCAAAGCTAGTAAATATGCCGATTACAA 1046 30 100.0 37 .............................. CTATCCTTTATGCTATTCTTAAATTAATCGTTATTCG 979 30 100.0 36 .............................. ACTTTTATGGGCTTTTGGTATGTTGATTCTCGGAAC 913 30 100.0 36 .............................. TTGGGGTATTTATATGTTTGTAGCAAAGCCTGGCAA 847 30 100.0 36 .............................. CATTGTTAATAAAGATTACTCGGCATTTATTGATAT 781 30 100.0 37 .............................. GTATTCAACTATAAATTAAAATATTCCAAAATAAAAA 714 30 100.0 37 .............................. CAAGCAACAATAGAAAAGCCTTTAAAAGAAGTACAAG 647 30 100.0 36 .............................. TAATTATGACCATGTTTGATCTCCCCCTATAAAAAT 581 30 100.0 37 .............................. ATAGAGAAAATTCCTATAAGTTGTCTACTATGAAACT 514 30 100.0 36 .............................. CCTTGGAGTAAAGAAGATTTGGAATATCTTATAGCT 448 30 100.0 36 .............................. GACAAAATTTTATGATAAATATGTTTTTTGTGTTTA 382 30 100.0 36 .............................. TTCACTTTGAAGATGATTTTTAACTTTACTTCCTCT 316 30 100.0 35 .............................. GTACAAGCTACAGTTAATAAAATAACTAATAGCAA 251 30 100.0 35 .............................. TTATCTAAGTTAGATGAATGGCTAGAACAGAATAT 186 30 100.0 36 .............................. ATTTAAGTATGGAATTAAAAAGAATAAACAACCAAG 120 30 100.0 37 .............................. ACTATAATCAGTATATAATCTTCCATCATTAACATTA 53 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 19 30 100.0 36 ATTTACATTCCAATATGGTGCTACTAATAT # Left flank : AATTCTCTTGCAGATTTAGTTTTATCAAAAGATTTATAATATGTGCTTCTGGCTACGCCTAGAACGGTACACATAGTCTTAATATCATGGTTACTTTTATTGCTATCTATAAATTCTATTATTTCATCTAATTTTTTGTTGCAAATATGGCCATAGCTTTTTTTAATATTTCATTTTCCTCTTTGATTCTTGCCATTTCTTTTTTAAAAGCCTTAACTTCCTTTAATGTCATAACTTCATTATCATCTACTTGTATTTCTTTAACATCTTTGATCCATCCGTTAATTGTTGATTTTGCAATGCCATATTCGCTACTTAGCTCTGCTAAGGTCATTCCTGATTTATATAAGTCTACTATCATATCCTTATATTCTTGATCATATCTTTTGCCCTTTCCCATATTGTACACATCCTTTCTTAACTAAATATTATTTTACTTAGTTCGTCTTAATGTGTCCACTACTTTATACTAACACCAAGTATTATAATTATGTAATTAT # Right flank : TCTTGAAAGAGTAGAGATATTCCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTACATTCCAATATGGTGCTACTAATAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [25.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 2 2521-4399 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASRV01000250.1 Clostridium sartagoforme AAU1 contig00277, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2521 30 90.0 36 ......A..AG................... ATAGTCAATATTTATTTTTCGACAAATAAAAAAAGC G,C,A [2526,2528,2537] 2590 30 100.0 36 .............................. ATAAGTCAATTTGGGTGGTTAGATAGATACAATACT 2656 30 100.0 36 .............................. TCATCTAAATATTCGTCATATTTTTCTAAGTCATCT 2722 30 100.0 35 .............................. GTAGAAAATGAAGAAGAAGGCGATATTGAAGCTCC 2787 30 100.0 37 .............................. ATTATATTTGGTTATGATGAGTTACAAAATGAATTTA 2854 30 100.0 36 .............................. ACAGAATTAATACTAAAACTATATAAATATGAAGAA 2920 30 100.0 37 .............................. TAATACATTATTTCAAATTCATCACCTGCAAGATAAC 2987 30 100.0 36 .............................. CAAAAGTGCATCATCTACAAGTGCTATAGCTTGAAT 3053 30 100.0 34 .............................. GTATAGAGTTAGCGTCAGCAACGTTGCCTTCTCG 3117 30 100.0 36 .............................. TACTTAAGATAAAATTCAATTTGAGCATAAGGAATC 3183 30 100.0 35 .............................. TATTTCCTTACATTTCTCTATAATTATATTCTTAA 3248 30 100.0 36 .............................. ACTAAGGCTATTTTCTCTGTTCTTGCTGGAAATTTG 3314 30 100.0 36 .............................. ATAATAATATCTGAATTATTATCTATTTGTGTAATT 3380 30 100.0 37 .............................. CTGGTTCTAGCAAATCTATATACATTTGCTACATAAG 3447 30 100.0 36 .............................. TGAGGATGTAGGCATTACATTGAAAGTTTATGCTAA 3513 30 100.0 37 .............................. AAACTTATTTTATGGACAGATAGAGGAGCAGCAAGAC 3580 30 100.0 36 .............................. TTAATTACACTAGCTGAAACTTCTAGATAAAAAGAA 3646 30 100.0 35 .............................. GAAGCAGTAATTGCAAATAAAGTATCTAAACTTAG 3711 30 100.0 36 .............................. TCAAAAATAAAATTCTATGTTGATGGTAGATTTTTA 3777 30 100.0 35 .............................. TCTTTTAATTCGTAACAAGTTGTATCGTTCATTGA 3842 30 100.0 36 .............................. AAGGTGAGTAAATTCATAAAATATATCAAACCCTTC 3908 30 100.0 35 .............................. GGTTTTATTCCTTTGCCTACTGAAACTATAATGGA 3973 30 100.0 36 .............................. GATTCAGGACTAGGATATTTAAATCTTAAACCACAT 4039 30 100.0 36 .............................. TTTAAGAAAATTGATTACTGATTGTTTTATTCCTTC 4105 30 100.0 36 .............................. CTTACTGACTTAATAACTTCATCCCAATTTTTAAAA 4171 30 100.0 37 .............................. GTGAACTTGCAAATAAATTTTATAAAATAGGTTCTTA 4238 30 100.0 36 .............................. GAAGTTAATTATAAATTCCAATTAGGCTTATGCTTA 4304 30 100.0 36 .............................. TCGTCGTCCTCTAAGGTTATAAAGTCCTTTTGTCGC 4370 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 29 30 99.7 36 ATATTAGTAGCACCATATTGGAATGTAAAT # Left flank : TACATATATTCATACTATCAAAGATGGTTGGTGCTATTTAGCTTCAGTTCTTGACTTACATTCTAAAAAAATAATTGGCTACGCTTTCGGTAAGAGAATGACTAATGATTTAGTTGTCAAAGCCTTAAAAAATGCTTATTACAGCCAATCTCCTGATAAAAATAAGCAACTAGTATTCCATAGCGACTTAGGTTCTCAATACACTAGTAATGATTTAAAGGACCTATGTAAAGAGTTTAATATTCTACAATCATTCAGTAAAAAAGGTTGTCCATATGATAATGCTTGTATAGAATCTTTCCATTCATCAATAAAAAAGGAAGAAATATATAGAAGTACATACCGCACCTTCTCAGAAGCTAATGTGGCTATTTTTAAATATATTGAAGGATGGTATAACAGAAAAAGGCTGCACTCATCACTAAATTACATCACACCACATCAATGTGAATTATTAGCTAGAAGTTCAGCATAAAAAAGTTTGACTTTTTGTGTCCAAG # Right flank : T # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATATTAGTAGCACCATATTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 19-1045 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASRV01000266.1 Clostridium sartagoforme AAU1 contig00292, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 19 30 100.0 37 .............................. TATTTTGTTATTAATATAATTATATAACAAAATATTT 86 30 100.0 35 .............................. GTTATAGCTGAAAGAATAGCTTTAATAGCATTTAA 151 30 100.0 36 .............................. TATTCATCAAGAACATAATCATTATCATTTAATACA 217 30 100.0 37 .............................. TCTTATTAAATGCTTCTATATATTTAAGTTTCCAACT 284 30 100.0 37 .............................. GAAGGTGCAGCAGCTTATTATAATTTAAGCTTAGATA 351 30 100.0 37 .............................. GAATAGTAATAGGTTTTATATCTGAAATAATAATAGA 418 30 100.0 37 .............................. GCTTGTCTATATCTATTTCAATTAAATTAAAGTTCTT 485 30 100.0 36 .............................. TAATAATAATTGGAATCACTGCTTTAATTGCAACAA 551 30 100.0 36 .............................. CAAGGTTACGTTGGTGAAGATGGTGGAAAAACTTTA 617 30 100.0 35 .............................. TTATTTGAATAAACTATCTAAAGAAACAGGCTTAA 682 30 100.0 37 .............................. TAATGCTACTAGAGCCTATAAGAAGGCTTATCCTAAT 749 30 100.0 36 .............................. AGAGATACTAAAGAATAATTGGAGTGGGAAACACTA 815 30 100.0 37 .............................. GTCTCTGGATCTCTTGCTCTTCTTTGCAATCTTTCCA 882 30 100.0 38 .............................. ATGATAGGAGGACATGCAGGTGGAGTATTAAAATATAC 950 30 100.0 36 .............................. ACTTCTTTTTCTAGATCCTCTTCTTCATCATTTATT 1016 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 16 30 100.0 37 ATATTAGTAGCACCATATTGGAATGTAAAT # Left flank : CCCCACAAGGGGGCACAAA # Right flank : | # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATATTAGTAGCACCATATTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [10.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 39-927 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASRV01000267.1 Clostridium sartagoforme AAU1 contig00293, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 39 30 100.0 36 .............................. GTTGGAAGAAAAAAAGTAAAAAAATAAAGCTACTAT 105 30 100.0 36 .............................. TATGGGTATAAAGCTGAAAAAAGTGTATATTTAGAT 171 30 100.0 35 .............................. CGTTCATAAGCTAGGAATTGCGGAATACTCATTGT 236 30 100.0 36 .............................. ATAATATTTATAATTATAATGAGACATCTAAACCTA 302 30 100.0 36 .............................. GGAATGGTTAACATGGAATTAATGATTATAGAAGGA 368 30 100.0 36 .............................. ATGGGGAAAAATGAGAGATAAGCTATTAAATTTATA 434 30 100.0 35 .............................. TCAATATTAGCTGAAAAATATTCTAATTCCTTATC 499 30 100.0 37 .............................. AGTTTTGAAAGGATAGATGAATGTTTCTTTGCAACAG 566 30 100.0 36 .............................. GTAACTAAAAGTTATGGCTCAATCGGTTCTTTATCT 632 30 100.0 36 .............................. CTTCATAAAATCCTTTAGCATTATCAAAAATTGCAT 698 30 100.0 37 .............................. CAAGCTACAGGTAGTGATATAGGTATATATTTTGAAG 765 30 100.0 36 .............................. AATTTATTTAAACAAATAGCAAATTTAAAAAATAAC 831 30 100.0 37 .............................. TATATAGGTAATAATTAAAATGAGGTGATTATATGAA 898 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 14 30 100.0 36 ATATTAGTAGCACCATATTGGAATGTAAAT # Left flank : ATTGGAGAAAAGAGTGTAATACTACTACAGCAGCTTATA # Right flank : ACAGAATTATATGAACATGAAGTTGATTGTTAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATATTAGTAGCACCATATTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [41.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 631-2 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASRV01000276.1 Clostridium sartagoforme AAU1 contig00300, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 630 30 100.0 37 .............................. CTGCAATTATATTTTCCGCTACATTTGAATAATTAAA 563 30 100.0 37 .............................. GGAGCATTAGATACATTAATTGAATTAGCAAGTGCAT 496 30 100.0 35 .............................. AAAGAAAGTATGTGGTAGAGAAGTTTACAAAGTAG 431 30 100.0 38 .............................. GGAGTAACAGACATTGACACTATCAATTACATTTCTAG 363 30 100.0 37 .............................. AGGATTAAACTTCATTTTTCTTTTCTTCCTCAATTAA 296 30 100.0 36 .............................. AAGCATAGAGAACGAACACGAACAATCATTCAATGA 230 30 100.0 37 .............................. AAAGAGAGATGTTGAGCTAGAAGATGATAGAGATATT 163 30 100.0 36 .............................. TAGCTCACACTCCTTGTTTAACCTTTAAATTTTATA 97 30 100.0 36 .............................. GGAGCAACATCAGAGGAAAAGACTTCTATTGTTGAA 31 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 10 30 100.0 37 ATATTAGTAGCACCATATTGGAATGTAAAT # Left flank : AAATGCATTAAATCCATGTATAAAAAACTTATCTACTGG # Right flank : TT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATATTAGTAGCACCATATTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [1.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 38-529 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASRV01000283.1 Clostridium sartagoforme AAU1 contig00305, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 38 30 100.0 35 .............................. AATTTCAGCTGCTTCTGTTACAGTTAAAACTTTGT 103 30 100.0 36 .............................. GATAGCATTAAACAAGTGATGTTAGATGTGGTAAAA 169 30 100.0 37 .............................. TTTAATTACTTCTAATCCTTTAGACTTCTTCCCCATT 236 30 100.0 35 .............................. GATGAATTGCTTGACAAACATATATCTAAATCGAC 301 30 100.0 37 .............................. CTCATTACAACCTCTCTAATATTGTTTGCCCAAGCAA 368 30 100.0 36 .............................. ATAACTATTTTTGAAGAAGTTGATTTTAGGGGAAGT 434 30 100.0 36 .............................. GATGGAAACGCAGTATTTAATGATTTAGAAATAATA 500 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 8 30 100.0 36 ATATTAGTAGCACCATATTGGAATGTAAAT # Left flank : TAAAGAAAATGGATACATGCTGCATAAGAGTTAAAGAA # Right flank : TTGTTTATCTCCCTTTCCTATGACTCTTAATGAATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATATTAGTAGCACCATATTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [43.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 42-337 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASRV01000295.1 Clostridium sartagoforme AAU1 contig00316, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 42 31 100.0 34 ............................... TGACAGTGGTGGAGTACCTACTATTGGATATGGT 107 31 100.0 35 ............................... CAACTTTAGTTGGTATTAGAACGGATGAAAGTCTG 173 31 100.0 36 ............................... ATCTTCATTTAAAAACAATATTAATTGACTTGGTTT 240 31 100.0 36 ............................... TGATAATTACGACGTAAAAGAAACATACACAAGAAA 307 31 96.8 0 T.............................. | ========== ====== ====== ====== =============================== ==================================== ================== 5 31 99.4 36 AATATTAGTAGCACCATATTGGAATGTAAAT # Left flank : GTAAATTTTTTCATATAAAATATTAGAAGAAAATAACAATGA # Right flank : AGATTACATATTTTATTATAATCTTTGTCGCTTATTTATATTAGTAGCACCATATTGG # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATATTAGTAGCACCATATTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.19%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 36-330 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASRV01000297.1 Clostridium sartagoforme AAU1 contig00318, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 36 30 100.0 37 .............................. TAAAAGTTGGTAGAGAAAAGAAAATTATTTTATCTAA 103 30 100.0 36 .............................. ACAATTGAAGCCAGTCAATCAGAAATGAATGAAATA 169 30 100.0 36 .............................. ACATATGCAACTCGTACTGTTATCTTAGACGACAAT 235 30 100.0 36 .............................. AAATGAACACTGTTGGGAAGTAAGACGAAAAGAAAC 301 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 5 30 100.0 36 ATATTAGTAGCACCATATTGGAATGTAAAT # Left flank : ATTGTTCTATGAAAGTTAATCCACTATATTTTTTAA # Right flank : TAAATATTTTAGAAATGTGGACAAAAGATTTGTGTA # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATATTAGTAGCACCATATTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [46.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 267-37 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASRV01000305.1 Clostridium sartagoforme AAU1 contig00326, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 266 31 100.0 36 ............................... AGTAGGTTCAGAACCACTATAAGCAATATATCTAAT 199 31 100.0 35 ............................... TCTTTACCCTCTTTTAAAAGGGTATTGGGCGCTCG 133 31 100.0 35 ............................... GAACATTTTATGTTTTCACTTAAGACTACTAACAA 67 31 96.8 0 ..............................T | ========== ====== ====== ====== =============================== ==================================== ================== 4 31 99.2 36 ATTTACATTCCAATATGGTGCTACTAATATA # Left flank : CATCTAATAATACAGAATCTATAAGATCATAAAATA # Right flank : TGTAACTTCTTCTGGTATCTCTGCATTTATTTCTATA # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTACATTCCAATATGGTGCTACTAATATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.19%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 231-3 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASRV01000311.1 Clostridium sartagoforme AAU1 contig00330, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 230 30 100.0 36 .............................. TTCTTTAAATCTATTCTTAGGAGTACAATCATAAGC 164 30 100.0 36 .............................. ATTCGCTCTTAAGAATATTCATTGATCTATTCATGT 98 30 100.0 36 .............................. ACCACTTGTTGGACTTATTATTATTTCACTTCCATC 32 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 4 30 100.0 36 ATTTACATTCCAATATGGTGCTACTAATAT # Left flank : TACTAATATTCTTTAACTCTTATGCAGCATGATCCATTTTCTTT # Right flank : TCT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTACATTCCAATATGGTGCTACTAATAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [1.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 56-216 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASRV01000317.1 Clostridium sartagoforme AAU1 contig00334, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 56 30 100.0 35 .............................. GGATATTTAAAAGAAATAACTTTACATTTGAATTT 121 30 100.0 36 .............................. TTTAATAGCCTAACTATACTTTTCATGCAGTATTCA 187 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 3 30 100.0 36 ATATTAGTAGCACCATATTGGAATGTAAAT # Left flank : CCATATTGGAATGTAAATCTGTAAATTCTATCCGCTAAATTTCTAATATTCATTTA # Right flank : TATCCTCCGGCATCATTTCATC # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATATTAGTAGCACCATATTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 296-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASRV01000093.1 Clostridium sartagoforme AAU1 contig00109, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 295 32 100.0 35 ................................ CTATATTAGTCTAGTTGTGCTTTTCATTGGCGATT 228 32 100.0 33 ................................ TAAGATTAAAAAATAAGTTCAACTGAATACATA 163 32 100.0 34 ................................ GACTTAATGAAATCAAAACTATTATAACTATTCA 97 32 100.0 34 ................................ GAAGAAACAGGGGAAGTATATAAAACATAACTTT 31 31 93.8 0 ..............................G- | ========== ====== ====== ====== ================================ =================================== ================== 5 32 98.8 34 ATATTAGTAGCACCATATTGGAATGTAAATTT # Left flank : GATTATGATCCATTTAAAATATGGTGGTAGGGGTGAGAGTTAATTGTATGTTATATTAGTTTATGATATAAAAAGTGATGATGGGGGGCAGCGAGTTCTAAATAGAACTTTTAAAATATGTAAAAAATACTTATCTAATATTCAAAACTCAGTATTTGAAGGGGAGCTAGCAGAGTCACAAATAATTAAGCTAAAATACGAATTAGATGGTATAATAAGAAAAGAGAAAGATTCTATAATATTATTTAAAAGTAGAAATGAAAGATGGCTATCTAAAGATATGTGGGGGAAAAAGGAGGATAAAACTAGCAACTTTATTTAATTGTCGACCTAAGATAATGTTAAAATATAGGTGAGTAGACAATGATAGTAATATTAAGGGATTAAAGAAATATTTTATATACTTTATATTATAAAAGTTAGTAATATCACTTTTAAATTAGTAGATAGACAAAAATACCACTTAGATATAAGTAATAATACGGATTGTCAGCGGACGC # Right flank : G # Questionable array : NO Score: 6.00 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATATTAGTAGCACCATATTGGAATGTAAATTT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //