Array 1 84987-84779 **** Predicted by CRISPRDetect 2.4 *** >NZ_FUKV01000131.1 Pseudoalteromonas sp. JB197, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 84986 29 100.0 31 ............................. TCATAGCGACCTGAACGCCTTATGTTATACA 84926 29 100.0 31 ............................. TGAGTACGTAAAAGAGCTGACTGCTCGACTT 84866 29 100.0 31 ............................. ATAAAAAACGATACATAGCGCTAATATATAT 84806 28 89.7 0 T.......................-..G. | ========== ====== ====== ====== ============================= =============================== ================== 4 29 97.4 31 AGTGAACTGCCGAGTAGGCAGCTGGAAAT # Left flank : ATTTTGAGATGATGACTCATGATAAGTTATTTGGCTTATCAAAAATACTCGAAGTACCAGTAAACCAAAGCGAAGTCATGTTTGTTCGCAACCAATCAGTAGCCAAAGCATTTGTTGGTGAAAAGCAAAGACGATTGAAACGCGCTAAAAAGCGAGCTGAAGCTAGAGGGGAGGTTTACAACCCTGAATATAAATTTGAGGCAAAGGACATAGGCCATTTTCATTCAATACCTGTATCAAGCAAAGGCAACGGGGAAAGTTTTATACTTCATATACAAAAAATTGAAAATACTAATGCGGTAGGAAATCAATTTAATAATTATGGCTTTGCTACAAATCAAACATTCCAAGGCACGGTTCCCTCTTTGAATACCCTTTTTTAATAGTTTTAAAACACTCTTTTAATTTTCAATGAGTTATCTGATTGATTGAAAATAAGGGTAAATAATTTAAATTCATTTAACAGTTTGGTATTTGTAGAAATTTAAACTATTTTTAAT # Right flank : TAGGCCGGGAAGTGAATAACCACAAATTGTGACTTTTTACTGCCGAAAAGGCAGAGGTTAAATAGAAAGTCCCCAGCAAACGCTGGGGTCTTTTTAAGCGTTATAACCGTATTTAAGGCTATTAACAACGTTCTTAATTAGCCTTCTTCCTGCAATAGTATTTACAAACATCAAAGGTGCTTTAGAGCTAAATTGTAAGGAGTACGTATTTAGCCATTTATTCCATCGTTCAATATTTTCAAAGTAATCAATACAAGCTGATGCTAGATGAGCTAACTCAAAGGTATTTTCACTCAAAGTTGCATTTAAGCGTGTGTACTCTTTTTTATGACGTTTCAAAGTTCTAATATTTGTACCAATTGCTTTAGCAAAGGATTGAATATCCCAACCTAACTGAAGCCTAAACTTCTCAACACTCTTTATATCTAAACCACGCTGAATTAATTCAATTTCATCTAAAGGGTTTGAGCTTAAATTAACTTTTCCATTGCTGAGTATAT # Questionable array : NO Score: 2.73 # Score Detail : 1:0, 2:0, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTGAACTGCCGAGTAGGCAGCTGGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.10,-8.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 1 1390-3251 **** Predicted by CRISPRDetect 2.4 *** >NZ_FUKV01000046.1 Pseudoalteromonas sp. JB197, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1390 29 100.0 32 ............................. GTACATCTAGATATCTTCAGATGTGATTTATT 1451 29 100.0 32 ............................. GTGAGGAGATTTACGGTCTCACCCTTATCTGT 1512 29 100.0 32 ............................. TGGGACCAGATGTACCTGCATTGCTGATAGTG 1573 29 100.0 32 ............................. CCCATCAAAACGATGGGCTTTTTATTGCATTA 1634 29 100.0 32 ............................. ACTCTGTAACTGGTGTTATGATTCCTACTTAC 1695 29 100.0 32 ............................. TGCTTTGATTGTGAAACCAAGTGACTTCATAC 1756 29 100.0 32 ............................. GCTGCTGGTGCCGGTTATTGGAATAAAATTAG 1817 29 100.0 32 ............................. GGAGCTTCAGGCTCTAGGCGGCTCTTTTGATA 1878 29 100.0 32 ............................. TATGTTTTAGGTGAAATAACATGCCGTGAGGA 1939 29 100.0 32 ............................. CTGCATGAGTGCTATAGCCAAGTCGTACAAAG 2000 29 100.0 32 ............................. CAGCGAGACAAGCTTGACGTGCTAGAAACCGA 2061 29 100.0 32 ............................. CCACCCTAAATGTTTAGCGTATATGCTTAAGC 2122 29 100.0 32 ............................. CTATAAAAAAATGGAAGTGGACGGTGAGCAAA 2183 29 100.0 32 ............................. CCTATTTTTTCGCCGCTCTCGGTAAATGCTGG 2244 29 100.0 32 ............................. ATGATCTAAATATGCTTGGATTACCTCATACC 2305 29 100.0 32 ............................. TTAACCGCCAATGCGAAAGCAGAGGTGATAGG 2366 29 100.0 32 ............................. CCTTGCCTTGCTTGCAGTTGCTGCAGTCTCTG 2427 29 100.0 32 ............................. TTTTTTTATTGATATTTTTTTGCTTTTCAACA 2488 29 100.0 32 ............................. ACTTACACCGGTGCGCTCTATTGCATCATTAA 2549 29 100.0 32 ............................. CGTTAAAAAATCACGGGTAAAAGGTTAACGTA 2610 29 100.0 32 ............................. CGATAATGACTAACCATGAAAAGGCTTTGGAT 2671 29 100.0 32 ............................. TTATGAGTAAATTAAATGATGTTTTTAACGGT 2732 29 100.0 32 ............................. ATCAAAACACTCGCAGTGTAGAGCAAATGACA 2793 29 100.0 32 ............................. CTTTAACAAGTCATAGCTTGGCATGTAATAAC 2854 29 100.0 33 ............................. CTGCAAACGCTGCAAGATTAAGATCATCTATTG 2916 29 100.0 33 ............................. TCCATGCAACGATTCATCCATCGCGTCCAATTC 2978 29 93.1 32 ..........................GG. TGGACGATTATGACGCAGGATGAAGCTAAGTC 3039 29 100.0 33 ............................. CGGTTTACCGCCAGCTAAAAACAAGTTGTTAAG 3101 29 100.0 32 ............................. TGTTTTGGACGGTTTTGTTGGTGGCATAATTG 3162 29 100.0 32 ............................. TGTATATATATCATCACCACGAATTACACTAA 3223 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 31 29 99.8 32 GTGTTCCCCGTACCCACGGGGCTGAACCG # Left flank : ACTAAATGCAGGAGAGATCACTCCACCTAAGCCTTATGATGATGTGCAGCCGCCGGCATTACCAGAGCCAGAATCTATTGGTGATTCAGGTCACCGTTCAAGTTAGGAATAGATTATGAGCATGTGTGTTGTAGTAACCGAAGCCGTACCGCCAAGATTAAGAGGGCGGTTAGCTGTTTGGCTATTAGAAATTCGAGCTGGTGTTTATGTCGGCGATGTTGGCAGAAAAATACGAGAGATGATTTGGCATCAAGTCCAAGAGTTAGCAGAGCAAGGAAATGTTGTAATGGCGTGGAGTACAAATACGGAATCGGGTTTTGACTTTATTACTTATGGTAAAAATGCACGAATGCCAATTGATTTAGAAGGTTTAAGATTAGTTAAGTTCACTCCAATTACGCAAGAAATACCGACTGATAAATAACTGTTTTGCTCTTTAAAAATCTGGTAGATTTTACTTAGCTATTTTTATTTAATTAAAACAAGCATATACTCTTAGA # Right flank : GCATATGCATGCTTAGAAAGACAATATCTTGTTGGTAAAACTCAACTACCGGTTCACTGCCGCACAGGCAGCTTAGAAAAGGCGTGCGTGATAGTGAAGGGCAATAGCAATGTTCACTGCCTAATAGGCAGCTTAGAAATAACCTTTGCCAAGCTGAACAACTCCAATCTAGTTCACTGCCGCACAGGCAGCTTAGAAAATTGAGGGGAAGAGATTAGATATGCGCTCAGTGTTCACTGCCGCACAGGCAGCTTAGAAAGTTAGAGACTGTTACACTATTTCCTGCCCCATGTTCACTGCCGCACAGGCAGCTTAGAAAGTTATTGAATCAAACCCACTTAAAACAGGTGTGTTCACTGCCGCACAGGCAGCTTAGAAAATGTAAATGACTCCTTAGTTTGATATATCAAAGTTCACTGCCGCACAGGCAGCTTAGAAAGCTCTCAAATATTTCGGCAAACGTTTGCGATAGTTCAAGGTTTGAGGAGCAAGGTTTATAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTACCCACGGGGCTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGTGCCCACGGGGATGAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.70,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 3302-3689 **** Predicted by CRISPRDetect 2.4 *** >NZ_FUKV01000046.1 Pseudoalteromonas sp. JB197, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3302 28 100.0 32 ............................ AGGCGTGCGTGATAGTGAAGGGCAATAGCAAT 3362 28 89.3 32 ..........TA.T.............. TAACCTTTGCCAAGCTGAACAACTCCAATCTA 3422 28 100.0 32 ............................ ATTGAGGGGAAGAGATTAGATATGCGCTCAGT 3482 28 100.0 32 ............................ GTTAGAGACTGTTACACTATTTCCTGCCCCAT 3542 28 100.0 32 ............................ GTTATTGAATCAAACCCACTTAAAACAGGTGT 3602 28 100.0 32 ............................ ATGTAAATGACTCCTTAGTTTGATATATCAAA 3662 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 7 28 98.5 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GTACCCACGGGGCTGAACCGCTTTAACAAGTCATAGCTTGGCATGTAATAACGTGTTCCCCGTACCCACGGGGCTGAACCGCTGCAAACGCTGCAAGATTAAGATCATCTATTGGTGTTCCCCGTACCCACGGGGCTGAACCGTCCATGCAACGATTCATCCATCGCGTCCAATTCGTGTTCCCCGTACCCACGGGGCTGAAGGGTGGACGATTATGACGCAGGATGAAGCTAAGTCGTGTTCCCCGTACCCACGGGGCTGAACCGCGGTTTACCGCCAGCTAAAAACAAGTTGTTAAGGTGTTCCCCGTACCCACGGGGCTGAACCGTGTTTTGGACGGTTTTGTTGGTGGCATAATTGGTGTTCCCCGTACCCACGGGGCTGAACCGTGTATATATATCATCACCACGAATTACACTAAGTGTTCCCCGTACCCACGGGGCTGAACCGCATATGCATGCTTAGAAAGACAATATCTTGTTGGTAAAACTCAACTACCG # Right flank : AGCTCTCAAATATTTCGGCAAACGTTTGCGATAGTTCAAGGTTTGAGGAGCAAGGTTTATATTCAATGGAAAAAGTAAGTACAGGATGGCTTGCTCACTCGGCGTTTAGAAAATAAGCCGAAGGGATAGAAGAATACAGGAGCCGTATACGAGGCCCGTACGTACGGTTCTGTGAGAGGGATGAGGCAAAAGCCTCACCCTACTCGATGTGCCTGTAATAAAGTTTAGCCTGTTAGCTTATCGCTTGTGCGACTCGATTATTTTTATGCCGATGTTTTAACGTATACATGCTCGGCTAAGGTTAAACTGGTTGGGTAAGTGGGAGTCGTTTTGCTGCTGGGCAATTATTATTTAGGGCATACCCATAGAAATGGCTGAGGGACGTTTGAAGTTTAATGTACTAGCATAAAGCAGAGCTTAATGGCTATGTAGCCATCAAGCTCTACTAACAGCTTGTTATTCAACCGTGGCTGTTAAACCACGACGTTTAAGTAAGGCTG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0.41 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //