Array 1 24818-28017 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJOP01000007.1 Amylolactobacillus amylophilus strain NBRC 15881 sequence07, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 24818 28 100.0 33 ............................ TATTGCAAAGACCGCTACTGAAGCGCGGCCGGT 24879 28 100.0 33 ............................ TGTTGTAAAAGCTAACGCCGTTAATAGGTTAGA 24940 28 100.0 33 ............................ CGGCGCCGGCTACTATGTATACTTTGAACCGTT 25001 28 100.0 33 ............................ CGGTAGACCAAGTTATTATTTTGGTGAAAAAGG 25062 28 100.0 33 ............................ CGCGGTAGGCCGTGCTAGGTATGACAACGGCGC 25123 28 100.0 33 ............................ TCTCATAGTGCCCGTTTTTCTTATATATTGCTT 25184 28 100.0 33 ............................ TCTCCACCACTCGCTTAAACTTCGTCTCATCAC 25245 28 100.0 33 ............................ CACTAAAAGCAGTCCCGGTACCATAAGATATTG 25306 28 100.0 33 ............................ TTGTATTATATAAATATAGAAGAGAGCAGGAGA 25367 28 100.0 33 ............................ CCATTCCTCCAAAACGAAAAATGGTCGGAGTTC 25428 28 100.0 33 ............................ TACATGGTTTTCACAAACTCATACATTGTTCTC 25489 28 100.0 33 ............................ TATGTTACGCCATCATCAATATCATCAGGGAAC 25550 28 100.0 33 ............................ TAGTAAGGGCATCGTCAGAGCTCGCAAAGATGG 25611 28 100.0 33 ............................ TCTTTTTAGCCAATTGCACTTGCGTAATGCGTT 25672 28 100.0 33 ............................ TCAACATTAACCTTAATCTTTGTCATTTAAAGC 25733 28 100.0 33 ............................ CACTCAGGAGTACCTAATAAAACAGATTAGTCC 25794 28 100.0 33 ............................ TTATCCACGGGCGTTGCGTTGTCATCAGGATTA 25855 28 100.0 33 ............................ CAGGCTTGTTATTTAAGGGGGTTGGTTGGCTAT 25916 28 100.0 33 ............................ TACTGATTTGTCTTGTGGCGTTATCAGCGTTGC 25977 28 100.0 33 ............................ TTTATCAAAGAGGTACCCACAAAGAGAGGATGA 26038 28 100.0 33 ............................ TTAAAAAGGCAAACCTCAATCTGGAGGTTAAAA 26099 28 100.0 33 ............................ TAATTTCTGTCAAACAATTTATATTAGTTGTTG 26160 28 100.0 33 ............................ TTCATGAGGGTGTAGACCGTTCGACAGTCAATG 26221 28 100.0 33 ............................ TCATTTCATCTTGGCAGGCTCTGCAGGCTTGAT 26282 28 100.0 33 ............................ TTGTCTTCCCCCCTTGGCGTAATTTTGAAGTTT 26343 28 100.0 33 ............................ TGCCGCATCGACATCTACCTTGTTTTGCGTAAT 26404 28 100.0 33 ............................ CACTAGTGGTTCTTGTAATGGTAGCTTGACCGA 26465 28 100.0 33 ............................ TAAATAATTTCCTCTACTCTATCAGACGTCTGT 26526 28 100.0 33 ............................ CCATCGCTTCCTATTATACTTTTAACACCATCG 26587 28 100.0 33 ............................ TGATACATTGAACCCGTCTGATTTAATGAAACA 26648 28 100.0 33 ............................ CATGGTCGTTTTAACGGCGGACGCCGTTATCGA 26709 28 100.0 33 ............................ TAATTCCTTTAAATCGTTATAGCCCGTGTAGTC 26770 28 100.0 33 ............................ TTGCTAATCCATGGCATATCAATACCGACAATT 26831 28 100.0 33 ............................ CTAGTATCTAAACCATAGTAGTTTAGTGTTTTC 26892 28 100.0 33 ............................ TAGATATTGTAAGAGAGATAGAGAGAGGGAGAA 26953 28 100.0 33 ............................ CGTAGCTTAAAACCTGCTGAATAGTGCCAGACC 27014 28 100.0 33 ............................ TCAAGTTAAAAGCTGATGGTTCAAAGGTGGATA 27075 28 100.0 33 ............................ TCCGCGCAATGATTTAACAGGTGCAGAGGTTAA 27136 28 100.0 33 ............................ TCATACGGGCCGGCGTGTGTGTAGTCGCGCGGG 27197 28 100.0 33 ............................ TCATGATAATTCAAAAGTTTTTGAAATGTTTAC 27258 28 100.0 33 ............................ CTCCAACTAAAAATTGGATTATCGGAGTTAAAA 27319 28 100.0 33 ............................ TCAGGGGTCTAGCAGCAAAGCCACGGCTCAGTA 27380 28 100.0 33 ............................ TCGCCAGAGCATTTCTAATTTTCGTGTTGGCAG 27441 28 100.0 33 ............................ CAGCAAGCAAGGCTATTATCGACTATGCGTTTA 27502 28 100.0 33 ............................ TTACAACCGCTTTTACGGCATTTATGCATAATC 27563 28 100.0 33 ............................ TAAGTGTTCGATAAATTTACCTAGATTTTCAAA 27624 28 100.0 33 ............................ TTGTGCTAGGCTGGTTGCAGATATTTGTAAGCG 27685 28 100.0 33 ............................ TACCGCCCACTTGATGATGTGATATGCCTTGTC 27746 28 100.0 33 ............................ TCCACTCAACACCACCAATTCTGCCTTGCACGA 27807 28 100.0 33 ............................ TATTCATTATCTTGCCATGTGTAATATGCATCA 27868 28 100.0 33 ............................ TAGCACAGTATAAATAATTAGGAGGTCATTCAA 27929 28 89.3 33 .........................CTG ATCAAGTTGAGTGATAAATTTGCGGTTTTCAAT 27990 28 96.4 0 ..........T................. | ========== ====== ====== ====== ============================ ================================= ================== 53 28 99.7 33 GTTTTCCCCGCACAGGCGGGGGTGATCC # Left flank : TGATACTGATAAGATTATTGCTATTGGTATGGTCAAGATTAATCACGGTGTTGCTGACAATCCAAAACAAATTCTAATTAAAATTGACGAGCCACTCTCAGATGAAATAATTAAATTAACTGGATATACAAACAAATGGTTGGAGACTGAAGGAGTTGATATTGTTAGCGCATTAAGTAGATTTGTAGATACTGTTGAAAATTTACCAATTATCGGATTCAATGTAAACTTCGATATCAATTTTATCAACAAAAATTTGATTGAAAATGGTATGTTGAAAGTAGAAAATGAAATTACTGATTTGAGAACAGTGGTGAAGAAAAATGAACTGTTTTTGAATAATTATCGGTTAGAGACAGTTCTGGCAAAATATGGTATTGAAAATATTAACCCACATCATGCGGAATCAGATGCGCTGGCAACGGCAAAGCTTGCGGATCAACTCATAAAAAATAGTTTACTATATTTTTAGAATGTTGATTTATAAGGGATCTTTTAGT # Right flank : CTTGGTGCCGGAATATTTCAAATCTGATTTTTTAGTTCCCTGTATATACGGGGTGATTCATACACCGATAGCTTATATCAGTCAGCAATTACAACTTATGAACGTTCTAAGCATGAAGTTCAGTCCTGGCAAGTTTAATTAGTCAAAGAAATATTTGCGATTATACTTTAATATACAGTCATTATGCATATTAGGGTATTTGTTCTCACTAGGAAATGTGTATTAATGCTATAATACTAGGGTGGTTTTCCCCGCATACGCGGGTGTGATCCTGTTATGTTTGCTAATTTAATACATATCCAGGTTGTATTCCCCGCATTTGCGGGTTTTTTTGTTTTCCCACTAATCCAACACTTCCCCCAATTCCAACGACCAAACAAAAAAACACTAATCTAACCGATTAGTGCCCCAAAGTCCTCAAAATATTTAGCAAGGTGAAAATTTTAACAACGTGACGTTAAGCCGCTTTCGTCGCTGACACAAGAAGCATCATTGGTCGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCACAGGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCGCAGGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.90,-11.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //