Array 1 386745-388152 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP084018.1 Megamonas funiformis strain NBRC 114415 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 386745 30 100.0 34 .............................. ATAAAGTTATGTTCTTTAAGCACCTTAATATTTC 386809 30 100.0 36 .............................. TCATATGATAAGTATATTTATCATACTGTGATAAAT 386875 30 100.0 36 .............................. TTTTTTCCGCTGTTCTACTAAACAGCTTTTTGGACT 386941 30 100.0 37 .............................. GGCTCGTATGATAGAAGCTCATAATGACCAAATTAAA 387008 30 100.0 35 .............................. GCAGTTTTATTATCTGCAAGACGAAAAGCTTTTAT 387073 30 100.0 37 .............................. TGCTTCCCATGTGTTTGTTGTTAGATTTGGCATCCAA 387140 30 100.0 36 .............................. TATCTGAAAATGAATTTAAACAACTTATAAATGCTA 387206 30 100.0 35 .............................. GATATAGCCACTTTTGTTTTTATTTTTGTATTTTG 387271 30 100.0 35 .............................. CCGAAAATTTCTTGCGTTGCAATCTGATGAACATG 387336 30 100.0 36 .............................. AAGTTTACAACCTTTTTAACATCTGCCATTTTCGAT 387402 30 100.0 36 .............................. TTAAAATTAATATTTGGGTATCTATCTAATAGCATT 387468 30 100.0 35 .............................. TAAGGCGTAGTCGCCTGTGGTATATACCAATCGGA 387533 30 100.0 36 .............................. TCGCTTAGTACGTCCGTATCGTCCGCCACCCTAACA 387599 30 100.0 37 .............................. TTATTTATTCTCCTTTTAAGACAAGTGTTTTAGTGTA 387666 30 100.0 36 .............................. AGAAAATTAAGAACCACGACGCGGACAGATTGGCGG 387732 30 100.0 36 .............................. TTCAATATATCAGCGGCGGCGATATTATTAATAATA 387798 30 100.0 35 .............................. GGTAATATTGTACAGCATAATAAGGATTATTATTT 387863 30 100.0 36 .............................. TCAGGAATTTTTAACTTAGTTTGTATTTCATCTTGA 387929 30 100.0 35 .............................. ACAAATATGGTTCATGGCGTTCTGTAGCCGAAGCA 387994 30 96.7 34 ............T................. TATTCTTGCGTTCTTTTCTTGTTAACGCTCTATA 388058 30 100.0 35 .............................. TCATTTAAAAATGCTTTTTCAAAGGATACTGCTTT 388123 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 22 30 99.8 36 ATTTAACTTTAACAAGTGTTGTATTTGAAT # Left flank : TTTATTATATCATAATTATTCATAAATTCTAAGACAATACGAAAAAAGATTACATATTTTTAAATTTTACTATTGAAAATTATTTATTTATTAAATTTTGTAACATTTTAGTCATATGAAAAAAATTATAAAAAAGTATTGCAAAATACATAAATGAGCAGTATAATAATTTTTGTTATTAATGACTCACTAGCTCAATTGGTAGAGCATCTGACTCTTAATCAGCAGGTTCCGGGTTCGAGTCCCGGGTGGGTCACCATATGATTTATAAAATTAAAGCAACTATCATTGATAGTTGCTTTTTGTTTTTTACTTAATAAAATTTTATTTACCATAAAATTACCAGCTAAAATTAAGAAAAACTTCTCTAAAGCTTGAAAATTAAATCTTTTTATAAAATCTCTAAAAATCCTATTATCGCTGGTAAAAAACAACTAAAATCCTTGTATATCAATACTTTTAATAGTATAATGAAAATCATAAAGATTGATTTTTCTAGC # Right flank : TCTTATTATTAAAAAATTATAAAAGGCTTTTAATAGATTTTGTCTTCTATTAAAAGCCTTTTTCTATTTAGAATTATTTTTCAATTCCTCTAAAAATTTCTTATCATCTTTGCTTAATTCTACTTTTTCAAGTAAGTCTGGTCTATTTGTATACGTAACACGCAAAGATTCTTGTCGACGCCATTTTGCTATTTTAGCATGGTCTCCTGAAAGTAGTACATCAGGTACGCTAAGACCTATATACTCACGTGGTTTTGTATATTGTGGATATTCTAGAAGTCCATTATAAAAAGAATCTGTTGGCGCAGACTCTCCAGAGCCTAATACACCTGGAAGCATTCTTGATACAGCATCGATTACCACCATAGCAGGAAGTTCTCCACCTGTTAATACATAATCACCAATAGAAATTACTTCATCAGCTAAATTTTGTACCACACGATTATCAAAGCCTTCATAATGACCACAGATAAATATTAACTGATCAAAATTAGCAAGTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAACTTTAACAAGTGTTGTATTTGAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.10,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 2 570034-569877 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP084018.1 Megamonas funiformis strain NBRC 114415 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ======================================== ================== 570033 26 100.0 40 .......................... GAATAAACATTTTATGAAACCTATACGATTTTGTAAATGA 569967 26 100.0 39 .......................... GAATGTAGGAAATGCTAATTGTACTAAATACACTCCATT 569902 26 96.2 0 ...............T.......... | ========== ====== ====== ====== ========================== ======================================== ================== 3 26 98.7 40 GATTAATAGAAACAAGAGTTGTATTT # Left flank : CAATAGATATCAATACAAGAAAACCATTACTTGGCAATATTACAGGTGGTCTTTCTGGCCCTGCTGTAAAACCTGTAGCACTTCGTATGGTATGGCAAGTAGCAAAAGCTGTAAACATTCCAATCATTGGTATGGGCGGTATTGCAAGTGCAGAAGATGCTATTGAATTCTTGTTTGCAGGTGCAACAGCAGTCGCAGTAGGAGCACATAACTTCATTGACCCATCAGCATTAAAAGTAATTGCAGATGGTATCGCTGAATATATGCAAAAACATAATATTGAAGATGTAAATGAACTTGTAGGAGCATTACAAGCTTAAATAAAAAATTACCAAGTGAATTTTTACTAAATAACCTATAAAGCTAAGAAATATAAGCTTTATAGGTTATTTTTTTATATAACTAATAAAAATCAAAATCAGCCGGTAAAATTTTTTTATATCCTTGAATAACAAGATTTTAGAGACTATAATAAAAAAAGAAATATTAATAAATATAGG # Right flank : ATAAAAAATCTTATTGACAGTATATAAAGTTTGTGATATATTAACATATGTTGTATCTGAGATGCAACGTATTGCACAAGAAGAAGTCACCGCTTCTCACCTTATGGCGTGCTAGTCACTAGGGTTACTAATTAAAACAAAAACGTTTAACGTATATTTTAATTTGTAATATCAGAGGGTGACGTGCGTCATCCTCTTTTTTGTGTATATAATAAAAATAATATATAAATAATGAGGTGTTTTCTATTAGTAAAGAAACTTTAAGAATTAATGGCGAAATCCGCGCTAGAGAAGTTCGTGTGACAGATGCTCAGGGAGAACAGCTTGGTATTATGTCTACAAGAGATGCTCTTCGTAAAGCAGAAGAAGCTCATTTAGACTTAGTAGAAGTTGCTCCAAAAGCAAAACCACCTGTTTGCCGAATCATGGATTTCGGAAAATATCGCTATGAACAACAAAAACGTGAAAAAGAAGCGAAGAAAAAACAGAAGGTTATCAGT # Questionable array : NO Score: 5.30 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAATAGAAACAAGAGTTGTATTT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.92%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 3 612693-612142 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP084018.1 Megamonas funiformis strain NBRC 114415 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 612692 30 100.0 35 .............................. GTGGGAAGTTGAAGATTTGCGAAAAGCAGGTTTAA 612627 30 100.0 36 .............................. AATCAAATTTTCAAATAAACAAAATTGCTTGCTAAA 612561 30 100.0 35 .............................. TAAATAAACTATTTAAAATATTTTCATTAACATTC 612496 30 100.0 36 .............................. TGCTAGATAAGATACCAGCCATACCGACTTGGTTTG 612430 30 100.0 35 .............................. TTTTCATAGCAATAATTTTTAACTTGTGCAGCTAA 612365 30 100.0 36 .............................. GCAACAGACGTTCATGAAATGAAATATGCTTTTTCA 612299 30 100.0 35 .............................. CAAGGAAATAAAAGAAGTTTACACTATTGTACCTA 612234 30 100.0 34 .............................. GTTGCTGGATTATTGAGTATAATACCAAATTTAA 612170 29 90.0 0 ................G........A-... | ========== ====== ====== ====== ============================== ==================================== ================== 9 30 98.9 35 GATTAACAGTAACAAAAGTTGTTTTTGAAT # Left flank : ATATTCATTGAAAGCAGGGTATTGATGAATGAGTAAAAAAATAAATTATAATTATGCTTTTTTATTTTACGATGTAAATGAAAAGCGAGTGCAAAAGGTATTTAAGATATGTAAAAAATATTTATCACATTTTCAAAACTCGGTATTTAGAGGAGAGATAACACCATCAAAATTAATGAAATTAAAATTGGAACTACAAAAAGTTATAGTAGATGAAGAAGATTTTGTTTGTATTATAAAATTAATGAATGATAATGTATTTGGTGAAGATATTTTAGGTAAAAAAGATATAGAAAATGGAGAAAGTTTGATTTTATAAACTAAATTTTACCAGGCATAAAAATAAGTATATGTATATAAACCCTTATAAATACAAGAGTTATAGCAAATTTCTTTCATTAAAGAAATAAATGCATTATGCCTGGTAATTTTTACTTAGAATGTTGAAATATCAAGGTTTTTGAGCTATATTATAAAATATAAAGCCTTTAAAAACGAGG # Right flank : GAACTTAGCAATAGAAATATATAGATATTTTAAAATAAAAAATGATAATAAATTATTATGAATAAATATATAAGCTATTAATAATTTTTATAGACTGAAAGGATTATTTTTGTTATAATATACAAACTATGACTTTGAAGGTATATATTTGACAAAAATAAAAATATTATTGGTTACTATTTGTATTATGGTGATGTCTACTATGACTGTCAGTGCAAATGCGTTTGATGATTTGAAAGATGACTTAAAAGATGATCAAGCATTGAAATTAGCAGCGGGATATCTAGTTGCTAATGAGGTGCAACGATTAACGAAAATAAGTGTATTAGAATTATTCTTAGCTTCAACAGCAGTTAATTATATGGACGATAAAGATCTAACAAATGCAGTAGTAAAATCTTTAGTATATCAGATAAAATTTTAAATGATGGCATAAACATAAGGATGTTGTTTTTTATAGAATGATATTCTTATGTTTTTTTATTAGATGAAACCTTAGT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACAGTAACAAAAGTTGTTTTTGAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [86.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 4 2180430-2180066 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP084018.1 Megamonas funiformis strain NBRC 114415 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 2180429 30 86.7 36 ..A..TA....C.................. TCATGTTTTTTGTCCACTCGTTTTTCCTCCTCCTTC 2180363 30 100.0 36 .............................. TAAATATATCGCCATATGTCGGAAAAATTCCAATCA 2180297 30 100.0 36 .............................. TCAATGAAATTGAGGGGTATAGCTGGGATAAAGATA 2180231 30 100.0 37 .............................. AGAATTAGGAGCAACTAATATAGAAGAATATATAGAT 2180164 30 100.0 39 .............................. AAAATTTGCATTAATGCAATTACAACAAGCGTTAGGTAG 2180095 30 83.3 0 .......................CAAA..A | ========== ====== ====== ====== ============================== ======================================= ================== 6 30 95.0 37 ATTTAACTTTAACAAGTGTTGTATTTGAAT # Left flank : AGCTTTTTTATTAATAGCTTTATCTGTAAATAAAAATTCATCATCAAATACTAGACTTATATTTAAATTTAACTCATCTAGTTTTAATCCTTTTATGTCTATATAATCACAGTTTAAAATATCAGTATATTCATTTACAGACATTTTCTTATCAGTAATTATACGTTTTAATTCTCCATTAGATTTCAATAAAATATTTACTTGTTTCATATTTATCTTCCTTTCTAAGCGACTTTTTTTGTCGCTTTTCGCACGTTTTTATAACAATGAAAAAAGCTATTACAAGGACAGCTTTACGCTGCAACGTTTATCCTTGTAATAGCTTTTGTAATTGTTATAATTAAGCGAAAGAAAAGCAATATATTCTATATATCATTGTTCTATTTTTAAAATATTATTTTCATTTAATAAGTATTTTACAAATATAGTATATTCTATAAAAACTGATGAGTAACTAACTGGTAGTAAACAAAACTATCATTATAGCCTTATTTATCAAG # Right flank : AGCTGTAACAAAGAGAATTTCTCAATGTTACAGCTTTTTTTATTAATTTTATAATGTGGAAAAGAAAAAGTTTATTAAAATTGGTACGGCTACTGAACATAATACACCATTAATTACAGATATAATAATAAATTCTTCACTACTATATTTTATAAGCATAGGCAAAGTGGAGTCTTCGCTTGTTGCACCTGCTGCTCCTATAGCTGCAAATGTATTTAAATATTTTACTAAAACTGGAATCATCATAAAAGCGATAAATTCTCTCATCAAGCTACTCAAAAAGGCTATTGTGCCTATCTGTGCATTTGCTAGTGTTTCAAGCATTACCCCTGATAAACTATACCAGCCCATAGATGCACCAATAGATAAACTATACACCAAATTCATATCAAAAATATAACTGCAAATAAATCCGCCAAAAACAGACCCAATAATTACACCTATAGGAATCAATAATATTGTCAAATTATAATTTTTTATCTTCTCAATTATTGATTCAT # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAACTTTAACAAGTGTTGTATTTGAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,-0.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 5 2259671-2259048 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP084018.1 Megamonas funiformis strain NBRC 114415 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2259670 30 100.0 37 .............................. TACTGCGGGTTCTTTTTCGTACAGCGTACTGCCTCCA 2259603 30 100.0 37 .............................. TTCTGGCAGTAGATTTTTAGGTGTTCATGTCTGCAAG 2259536 30 100.0 35 .............................. GCAACGGGTGAAATATCTTGGAGAGCTGATACTTA 2259471 30 100.0 36 .............................. AGGTATTAACTACCCTCCTGAATATTTTTTTGGCTT 2259405 30 100.0 35 .............................. AATAGAATATTATAAGAATAATCCAGACGCACCAA 2259340 30 100.0 36 .............................. TCGTGCAAGCTGTTTGCGCTAACCGTAGATATAGAC 2259274 30 100.0 36 .............................. TTATAGATAGCTTTAAATCCAAAGGTATACCTATTA 2259208 30 100.0 34 .............................. TTATCTTTTAAATATACATATACTGTTAACATAT 2259144 30 100.0 37 .............................. TCGCTAAAAAGCTTAATATCAACATATAAATATTTAA 2259077 30 83.3 0 ....................TA.A..A.G. | ========== ====== ====== ====== ============================== ===================================== ================== 10 30 98.3 36 ATTTAACTTTAACAAGTGTTGTATTTGAAT # Left flank : CTTATCCTCTTGCTAAAAAATATTTAAAAGGTTGCAGTGGTGTTATCACTTTCGTAATCAAAGGTGGTAAAGAAAACGCTGTTAAATTTATGGACTCCTTAAAATTAGCTTCTAATGAAGTTCATGTTGCCGATATTCGCACTTGTGTTCTTCACCCAGCAAGTGAAACACATCGTCAATTGACAGATGAACAACTTGAAGCTGCTGGTATCAATAGCGGTATGGTTCGTTTCTCTGTAGGACTTGAAGATATCAATGATATTTTAGATGACTTAAAACAAGCTTTCGCTAATGTAAAATAATTATTTAAAGGCATTTGTGTAAACAAGTGCCTTTTTTATTTTCCCAACCATTTTTTAGTTTAAAACCTAAAAGCCTTATAAATAAAGGATTTATAGAAAATCACCAAAAATCCTTAATCGCTGGTAAAAACTTATATAAATATTGATATTTCAACCTTTATAAACTATAATTATTTATAAAAGTATTAATTTTACTGG # Right flank : AATAAAAGAAAGCCTTTAAATATAAGTATTTAAAGGCTTTCTTTTTATAAAAAATCTCTAAAAAACACATAAAACTCTTTAAAAATTAAATAGTAGTCAACAAATAGACAACATTCATCACATATTTTAGATTAAATCAATAGCTTCTTTTAATTGTTCAATAGTTTTATGTGTATAAACTTTTTCATTAATGGTTTTCCCTACATGTCCTAATATTAGATTTTTTATATTTTCTTTTACATCTGCATTATCTAGTAATGTATTACAAGTATGTCGTCCATCATGTGGAAGATGGTTTTTTATAGCTGAATTTTCTGATTTACGCCATTTATAAGCTAAAGTAGCATACGGCAATTTTTTTCTTTTTATATCACCTGTAATTAGGTATGGATTATTAAATTCATTAGCCATATCAAAAAAATATTTTATAAATGGATAAATTTTTTCTGCTATAGGAATACGTCTATTTATCCCCATACTTGTTTTTGCTCCACCAATAA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAACTTTAACAAGTGTTGTATTTGAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,-0.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-85.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 6 2322700-2322010 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP084018.1 Megamonas funiformis strain NBRC 114415 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2322699 30 100.0 36 .............................. TGATAATGTATTTGAGGCAATAATTAAATTTCTAGA 2322633 30 100.0 36 .............................. TTTATTGGCTTGTGTCTGTTTATGCAATTTCCACAA 2322567 30 100.0 34 .............................. TATTCAGGGTTTTTTATAGAAATCCTGTAATTAT 2322503 30 100.0 37 .............................. GTTGTATGCATCTGGATACATAGCTTTTAATTTTTTA 2322436 30 100.0 36 .............................. GGCATAACAACGTCCCTAATACTAGCTTTAGTTTTT 2322370 30 100.0 36 .............................. AAGGGAAGATTTTAACGGCATTTTTAATTTAATAAC 2322304 30 100.0 36 .............................. AACATTATTTCACCTAAACTTCCAATCTTAATTTAA 2322238 30 100.0 35 .............................. TTGTCAAAATACTCCTTTCTTTTATTTGTTTTGCG 2322173 30 100.0 37 .............................. ATAGTTCTATTATCTTCATTAACGCTTATTTCTCCGC 2322106 30 100.0 37 .............................. CGTGGATTATCCCATGCAAAGTGAAAAGCTTTTACTT 2322039 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 11 30 100.0 36 ATTTAACTTTAACAAATGTTGTATTTGAAT # Left flank : CAAGGTTCAGGTTGTGCTATTTCCCAAGCTTCCACAGATATCATGATTGATTTAATGCTCGATCAACCAATCGACAAAGCCAAAGAATTATGTCGTTTATTCATTGGCATGGTTCAAGGCACAATCACTGATGAAAAAGAGCTTGCCCCTTTAGATGAAGCTCTTACCTTTAAAAATATATCCAAAATGCCAGCTCGTGTAAAATGTGCTGTACTCAGCTGGCATACTATGGAAACAATCCTAGACAAAGCCCTCCAAAACTCTCAATAAATAAAAAGTATCATCTTGATTTAAATAGTTCAAAACTAAAATTAAGATGATACTTTTTTTATCTAAAATTTACCAGCCAAAATCAATAAAAATCCCGCTAATCCTTGATAAATAAACTTTTTCACTAAATCCCTTCAAATCTCATTATTGCTGGTAAAAAATAACTAAAATCCTTGTTCATTAATACTTTTAATAGTATAATAAAAACCATAAGAATTAATTTTTCTAGC # Right flank : TCACTCTCTAGCAATAGTATAACAATGAAAAAAGCCTTAGGAACTGACCCTTCCTAAGGCTTTTGTGCGTCATCATGAGTTTGATTTCGTCTATACTTAATATAATATATTACATAGATTTTGCAATACAAAGCTTGTTATTGTGCAAATAAATATTTATGATAAACTACATCCTAAAAATCAAATAAAAACGGCAACAAAATGGCAACAATAAAAAAGTACCTGCATAAAACAGGCACTTTTATAAATAAATATACGAATATTATTTTCTCACAAAAGTCATAATTATAGTATCTTCACTATAATTATGCTTCATTTTCTCATAGTCTTTAGCCTCAATAGGTGTTATAACTACAGTCTTTAAGCTAGGATTTAATTTATTTACTTTTTCTACCACGCCTAAATGTTCATCACCATGAAAACTTCCTTGTACATGGAGAAGTTTCGTATCTTTATGTTCTTTTAAAAATTCAACAATACTTTCCGCCATGGTATCATCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAACTTTAACAAATGTTGTATTTGAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [60.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //