Array 1 223-441 **** Predicted by CRISPRDetect 2.4 *** >NZ_JHDU01000115.1 Streptomyces wadayamensis strain A23 LGO_A23_AS7_CO0681, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ======================================== ================== 223 27 100.0 34 ........................... CCCGTGCGGCGACCGCCACTGCACGACCTGCTGG 284 27 100.0 34 ........................... CCGGCTGTGGGCGCCGGGCGCGCGGATGCTCGCC 345 27 100.0 40 ........................... CCTTCTCCCGGTCGCTGGGCTTGGGCTTCTTCTTCTGCTG 412 27 96.3 0 .................A......... | CGG [423] ========== ====== ====== ====== =========================== ======================================== ================== 4 27 99.1 36 CTGCTCCCCGCGCGTGCGGGGTTGGTC # Left flank : TGGGGTTGGGACTTGGCGGGTGGGGTTGGCTCGGGTGAGGGTGAGGAGTGGGTCGGGGTGTGAGTGGCTGGAAGGGGGGCGCGGGAGATCTGTCGGGTTCAATGGGGGCGGGTGCTGGGTGGACACCACGGAGGGGATATGAGGCATTCGCCCGCATTGCCGGAATCTTTGAAGCTTGCAGGAGAGAGTGACTGGGCTGAGTGAAACCCCAGGTCAGCGAGAC # Right flank : TCCCTCCCGGACCCCGAGCATGCGACCGGCAGCCGCCGCTCCCCGCCCACGCCTAGGTCGACGCGGTGCTCCGGCTCCCCGCCGCCGAAGGCTCCCCCAGCCCTGCCGCCAGTTCCCCGTACAAGGCCGACTCCCGAAGGAGCGAGGCGTGGGTCCCCAGGTAAGGGGTCGCCCCGTCCAAGAGCAGGACGCGTTGCCCAGGTTCAGGCGCCGGAAAGTGGTGGCTCACCGTGATGACCGTGGCCGGGTGGGAAGCGAAGGCCAGCTCGGTCGCGGCCCGTGCCCCCGCGTCCAGGTGGGCCGTGGGCTCGTCCAGAAGCAGCAATGGCGTAGGTGTCAGCCAAGCCCGTGCCAAAGCGATGCGGCGGCGTTCGGACGGGGTGAGGTGATCCGGGCGGAGGGGGCGGGCGGGGTCAGCGGCGAGGGGGGTCAGGGTGAAGGTGTGGATGGCTTCCGTGATGCGAGGGGCCGGGGCGTTCGGGGCGAGGTAGGTGAGGTTG # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCGTGCGGGGTTGGTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCGTGCGGGGTTGGTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 91-1274 **** Predicted by CRISPRDetect 2.4 *** >NZ_JHDU01000118.1 Streptomyces wadayamensis strain A23 LGO_A23_AS7_CO0152, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 91 28 100.0 33 ............................ GATGGTCGACCGGTTCGACGCCCGGGCCTCCGA 152 28 100.0 33 ............................ GGCGACCCTCACGGTGCCGGACGTGGTGGCGGA 213 28 100.0 33 ............................ GGACCGGTGGGAGGACGTCCTGGGCGTCGAGGA 274 28 100.0 33 ............................ GGAGCACTGCCGCGAGGGTCATGCGGAGCGGGA 335 27 96.4 33 .....................-...... GGCTATGACCTCCCCAAAGCTGAACTGGCCCGT 395 28 100.0 33 ............................ GAAGCGGGCCGCCTCGTGACGCAGCCGATGACG 456 28 100.0 33 ............................ GGAGACGCGGGGGGCGATGGAGTCCAGGTCGAT 517 28 100.0 33 ............................ GACGCCAGGGTGGGTCGGGGTGTCCATGAATCC 578 28 100.0 33 ............................ GTGAACTCCTCCCCGCTCGCGATGTGCTTCCCC 639 28 100.0 33 ............................ GACCCTGACCGTCGCCGCCGCCGTCAACGGCGC 700 28 100.0 33 ............................ GGCCGAGGCCAACGCCGCCTCGGCCGCGATGAT 761 28 100.0 33 ............................ GCCGCAGCTCTCCGACCTGCGCGAGAGCGGGGC 822 28 92.9 33 ......GT.................... GACACCGCGCGAATGCGTTTCCGCCCTCGCTGA 883 28 100.0 33 ............................ GCCGGACAGGTCAATTTTCAATTCCCGGGGGAG 944 28 100.0 33 ............................ GCGCTATGCCGGTGCACCCGGGCCGCCGCGCCC 1005 28 96.4 33 ....................C....... GTCGGTTTCGACGGTGGTGCGGTGCACGGCGAG 1066 28 100.0 33 ............................ GTCGTCGCCCGGGTCGAGCGGGAGGACGGCATC 1127 28 100.0 33 ............................ GACGTGCACGGCCCAGGCGACGGACGCGCGGTC 1188 27 96.4 33 .................-.......... GGTCAGCCTGGTAAAGCGGGCGGCGCCTGCCCG 1248 27 78.6 0 ...........A...A.-C.....GC.. | ========== ====== ====== ====== ============================ ================================= ================== 20 28 98.0 33 GTGGTCCCCGCGAGGGCGGGGGTGTTCC # Left flank : GTGGGGGGTGCGTAGGTTGGGGGGTTGAGAGAGGGGGCGGTGATGAGCAAAGGGATGGCAAAGTCAGTCTGAAGGTGCAGGTGAGAAAGGG # Right flank : CCAGGAACCGATGCAAGGCCGGTGCGGCAGGCAAGTGATGCCCGCAGGCGCAAGGACTGCCCATTGCCGAACGAGTGACGTTCCCAGGTTGGCCGCTGATGTCCAGCCGCCGCAAATCCGGCGGCCAAATGGCAGCGCGAGTACTAGCCACCGCCCCCGACGCCCCTCTCCACCTCCCCCAAAGCCTCCCCCCACCCAAACCCAGCCGCATCCCCCCGCTTAGGCAAATGCGGCTCCCCCTCGGTGAAGACCACCCGCACCCCCTGCCCCCGCAAGGTCTCCACCGCCCGCCCCACCGCAGGCTGCGCCCCCAGCGCCGTGGACCAGAACGGCGCCGCGACCACCGGCACACCGAGATGTACGGCCTCGGCCGGCACCCCCAACGCCACCGTGTCCGTGATCCCGGCCGCCCACTTGCACGCGGACGTGGTGGTGAGCGGCGCGACGAGCATCGCGTCCGCCTTGGGCAGCCCGCCGGACTGGCCGGGCAGGGTGTACCG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGAGGGCGGGGGTGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGAGGGCGGGGGTGTTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.90,-11.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [5-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 5374-4933 **** Predicted by CRISPRDetect 2.4 *** >NZ_JHDU01000036.1 Streptomyces wadayamensis strain A23 LGO_A23_AS7_CO0056, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5373 29 100.0 32 ............................. CAGCATGAGGTGAGCGTATGGGCAGGTGCGGG 5312 29 100.0 17 ............................. CTCGCGGGGTTCCTCCT Deletion [5267] 5266 29 100.0 32 ............................. GACCCCGTCACGTACGGCGAGCACCTCAGCAC 5205 29 89.7 32 G...G.............G.......... TCCGGCGATCACGGTGACGGTCCCACAAGCTG 5144 29 86.2 32 G...G...T.........G.......... TACGCCTACCAGACGATCTGGGACAACTGCGT 5083 29 82.8 32 G...G..........C..G.........A CGAGGCACGGCAGTGGGAGAGGTTCTTCGACT 5022 29 82.8 32 G...G.............G.C.......T ACGACCGTCAACATGGCGACCCTGGTCCGACG 4961 29 69.0 0 G.C.G.....A.AAG...C.A........ | ========== ====== ====== ====== ============================= ================================ ================== 8 29 88.8 30 ATGCCGCCCGGGCGCGCAAGGGGTGACCG # Left flank : GCGGCACGATGGACAAGCCGGGTCGCAAGGTCCGGCAGAAGGCCGGGCTTAACCGCGCGATCCTCGACGCCTCCATGGCCGAGGCCCGCCGGCAGATCACCTACAAGACTTCCTGGTACGGCTCCCGCCTCGCGGTCCTCGACCGCTGGTGGCCCTCCAGCAAGACCTGCTCGGCGTGCGGGTGGCAAAACCCAAGCCTCACGCTCGCCGACCGGGTATTCGAGTGCGCTCAGTGCGGACTCACCCTGGACCGCGACCTCAACGCGGCCCGCAACATCGAGCAGCACGCAACACAGGTCGCCTCCGGTACGGGGGAGACCCAAAACGCCCGTGGAGAACCCGTCAGACTCCCCCGCCCCCGGGCGGAGAAGCAGGGCTCGACGAAGCGGGAAGACACCGGCCCTCCCGGGCCGGTGCCACCTCGGCGGAGCAATCCGCCGACACCCCCCAACCCGCGCCAAGGACAGGCAAAGCTGTTCTAACGTCCCAGGTCAGGAAGT # Right flank : CGGCGGCCTGGAAGTCCGGCCGGCCCGGCATCAACAGCAATTCAGAGCTGAACAATCACGTCGGATAGTCACCGAGCGAGCGACATAGAACACGTGGAGCACAAACCCCCCGCCCGCAGCAGTTCGGGGCAGGGGGTACGTGGGTTGAGCAGTCAGGCGAGCGGGGCGTTCTTTGCTTCGGTTACGAAGTTCGCCCACGCCGCCGCCGGGAAGACGAAGGCCCCCCTGCTGCGGTCCTTGGAGTCGCCGACCGCGACGCTGCCCTCCGGCATCGCCTGGATCTCGATGCACTGCCCGCCAGTGTCGCCGCTGTACGACGACTTCTTCCACGCTTCGGCCGGGAGATCATGCCGCATCATCAGGTGAGCCTCTTACTCGTTCTCAAGACCGTGCGCGAGGCGCTCGATCACGTGCATGGACTCTCGCGAAGATAGAGCGGCGGAGCGCAGGTGGTCAAAGGCTGAGCGGTACCGCTCGACAGCACTACTCTCCTCCAGGTA # Questionable array : NO Score: 5.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.44, 5:0, 6:0.25, 7:-0.17, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGCCGCCCGGGCGCGCAAGGGGTGACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCGGCCCGGGCGCGCAGGGGGTGACCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.20,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 219434-219101 **** Predicted by CRISPRDetect 2.4 *** >NZ_JHDU01000005.1 Streptomyces wadayamensis strain A23 LGO_A23_AS7_CO0932, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 219433 28 100.0 33 ............................ GCGATCGTCGTGCGGCGCGGACTGCTCGGCTCC 219372 28 100.0 33 ............................ GTAGTTGTTGGCGTTCATGGTGCTCCTTAGGCG 219311 28 100.0 33 ............................ TCGAGTCCGGGGAGTACCCGCGCGGCTCGATAC 219250 28 100.0 33 ............................ GAACCGCCCTCAGCTCGCCCCCGCCCAGATCGC 219189 28 100.0 33 ............................ CCTGCCCCTCGTCGCTCCGGACCGGCACCCCCG 219128 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 6 28 100.0 33 GTCGGCCCCGCACCCGCGGGGATGCTCC # Left flank : GCTGCGCGGCATGGGAGTGAGCGTGCTGTACGGGGAGGGCGGGTTCCAGCCGAATCCACCCGGCGAAGGCAGCGACTTCCCATGGCGCCTCGCCCTCGACGAGGTCGAGCGCGCTGTCGGCGCGGGGCGCTAGCCTGCCCCCATGTCCTCCCTGCCTGCTGCCCGGCCGCGTCCTGCGTCGGTGGTGAACGCGGAGATCCGCGCGCTGATGCTGCGCTCGGGCGGCCGCCTGGCTGCCGGAGACAGGGCCCGGTACGTAGCGCTGATCGCGGAGTGGGCGGAAGCGGTCCGCGATGCCGTCCGACCTGCGGCGTAGTATCCGGCCGTGGACATCCCCGACACCTTGATCGACCTCCAGCGCGCGCCGCCGACGCGGAGTGGGCGCGCCTCGCCGAGCTGACCGACAACGACAAGCGGGGGCAGCAGGGGCGCGCGTGGTACGACGCTGGCGCCCGGGCCCAGGCCGCCGTCACCGAGTGGGCGCGTGAGGCCGCGCGGCA # Right flank : GGAGCAGCTGGCCCAGGGAATCCTCCGCGAGCAGGATCAGCACCTTCCGGTCCCCGACCGTGCCAGTAAGGTCCAGCAGCTCACCGACACCGTCCTCCTGCACGCGCACCGCCTCCAGCACGACCCCATGGTCCGGGCCGGGGTACGGCTCTCACTGGACCGGGAAGCGCAAGAGGTCAACCGTCAGGGAGCCTTCACGCACTGGGGAACCGTCATCCGGGAACTCCTCGAACAGGCCGAGGCGCAAGGGGAACTCCTCCCCCACATCCACGTCGCCCAGACAGCCGACGTCCTGGTCGGCTCCTTCGCCGGCGTACAGGCCATGTCGCAGGTCCTGAGCGACTACCAGGACATCCTCACTCGGGTGACCGCCCTGCTGCACCACATCCTCCCCAGTACCGTCCTTCCGCCCATCCTCGCCACGACCGAGATCACCCCCGCCCGTGCCCCAGGCCGTCGCCCACGAACTGCGTCAGGACAGCACACACCACCACCCCGAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCACCCGCGGGGATGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGGCCCCGCACCCGCGGGGATGCTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [30.0-16.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 222794-222130 **** Predicted by CRISPRDetect 2.4 *** >NZ_JHDU01000005.1 Streptomyces wadayamensis strain A23 LGO_A23_AS7_CO0932, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ========================================================= ================== 222793 28 100.0 34 ............................ CTCCGCGTCCACGGGGCGTACAGCGTCGAGGCCG 222731 28 100.0 33 ............................ GCCCTGTTTCATGCGCCGCACGTCGGCCAGCGC 222670 28 100.0 33 ............................ GATCTCGCGGCATCCCGCGACCTGGCCTTGGTG 222609 28 96.4 33 .....G...................... GCGGCTCCGGCGCGGCCCCGCCGTCCCCCCGCA 222548 28 100.0 34 ............................ GAGAGCGCCCTTGAGTCCCTCCATCACTTCTCAC 222486 28 100.0 33 ............................ TGCATGAGCTGTGACCGATCCGGCCGTGTCGGC 222425 28 100.0 33 ............................ CCGGCTGGTCGACGCCTACATCCGCGACGGCAT 222364 28 100.0 33 ............................ CTGGACCCACTCAGCAACCACCACTGCTAGGTC 222303 28 100.0 33 ............................ GCCGGGGCCGTGGGGCTGGTCGCTGACGATGGT 222242 28 96.4 57 .............T.............. CCAGCGGCGGGCGGCGAAGAAGGCCAGCCGCAGGTGCCGGAACTTGATCTCCCAGGG 222157 28 85.7 0 ....................C.A..G.G | ========== ====== ====== ====== ============================ ========================================================= ================== 11 28 98.0 36 GTCGGCCCCGCACCCGCGGGGATGCTCC # Left flank : AATGCAGGCGTTGCCTTACCAAGATCGTGAACAGCGCATAGCCACGCAAACAACCTGCGGCCCCGAGCCGGACCACCGGACACCTCATCCAGCAGGCCCCGCGTCGAAGGGGCAAGGAAGCTGTCCCACAGCCGCTCAGCCACAGCCGCCGTATCAAGCAGGTGCGACAGAAGAAGATTCGTCTGCCCGCCGGCACGCTCCGCCGACTTCCCCCACAAAACCCCTAACGGACCTTCCACCGACTCCAGCGGCACCCCTGCATCCGGCACGCCGGACCACCCTTCGCTCAGCACTCACGACTGCCCGGCACAGTAGAGGACACCACTGACAATTGACGGCGGACGGCCCAAAGACGAACATCCCCCACGGCGGGCGCCCGCACCACGCGGTCACACACCGCGCTCCCTGAACTCCACCACTCGCTGCCCGGCCACGAACGAAGGGCGACGCACATGAATGAAAATGAGGCACTCTCGCGGTAACCTCCCAGGTCAGCAAGT # Right flank : CCGGTAGCCTTAAGTGGGCAGGTGCGGTGGGCAGCGGCGGTCTCCGGGCTGCACAGGCTGCCGCACCGGTCGCAGACCCCGCGCACCTCCTGCGGGCAGCAGGGGCAGGCGCAGCGGTTTCGGACAGCGGGCACGCTGTAGCCACCGATGTACCAGTCGGTGTTGCCGCAGCAGAAGCCGCATTCGCCGATGCGGCACGGTGCGCACAGGCCGCTCACGACCGGGCCTCCGCGCAGGCAGGGCAGGCGCGCGGGAACCACGAAGCCCACGGGCACTGCGGGTCCGGGCGCACCCCGAGGTCCACGGCCGTGGCGGTATCGAGGCGCCCGGCGCACCACACGCACTCGGTGCCCCGGAGCTGCAGCTCACCGAGAGCGGTCGGCTGCGGTAACTCCTGCACTGTCGTCGCCATGGTCATCCCCTGCTGTCCGATCGAGATCAGCAGGATGGCGCGCGGCCGAGGCCGGAACGCTTACAGATCTGTGAGCGTTACACCCCCA # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.09, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCACCCGCGGGGATGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGGCCCCGCACCCGCGGGGATGCTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 8890-9162 **** Predicted by CRISPRDetect 2.4 *** >NZ_JHDU01000095.1 Streptomyces wadayamensis strain A23 LGO_A23_AS7_CO0868, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 8890 29 100.0 32 ............................. CGCTGGGCGAGCAGCTCGTAGACGGCGCGGAC 8951 29 100.0 32 ............................. AACGAGTGCGCCGCCCAGGGGCGGCAGAAGGA 9012 29 96.6 32 ............................T CGTGAGGGCCGTCCACGCCTTGGACCACATGA 9073 29 96.6 32 ...........A................. CTGATCGCGCACCTCGCGGAGCGCGGACTCGT 9134 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ================================ ================== 5 29 98.0 32 GTCGGCCCCGCGCCTGCGGGGGTGCTCCG # Left flank : CCGCACAAGACACTCATCCGGCCACCCGCTCACACCTTGACCTCTCGCCAGCTGCGCTCGGAGAACAGCACATCGCCATCGTCGGACCAGAGTTCGAAGACCAAGCCCCGCCCCCGGGACAACAGCCATGACCGTCATCATCCTGATCGCGGCTCCAGAAGGCCTACGCGGCCACCTCACCCGCTGGATGGTCGAAGTCAACGCTGGAGTCTTCGTCGGCAACCCCAGCCGACGAATCCGCGACCGTCTATGGGAACTCCTCACCAACCGCATCGGCGACGGTCAAGCCGTCCTTGTCGAACCCGCCGCCAACGAACAAGGCTGGGCCGTCCGTACTGCCGGCCGTGACCGCTGGCGGCCCGTCGACTACGAAGGGCTTATCCTCTCCGCTCGAAGGCCAGCACATACACAAGATCGACAGAGCCGGAACTGATCGGTACACCGCAATGCAACTAAATGAGAACGGCAGACCGCTCAGATAACGCCGCAGGTCAGCAAGT # Right flank : ACTGGCAGGAAATCTTCCCCGAAGGCCGCGGACTCAGCCAGGTAAAAGCCAAAAACACCTACACGCTGGGAGGAAATGAGTGAGCGGCGCAAGCGACCTGTGGGGAGAATTCGGCAAACACCACGCACAAGGCCAGAAAGGCGCACAAGCACTCGGCCAGGAGATCGAACGCATCGCCCGCCAGGGCGGCATCACCTCACCCGTGACCACCACCCGCGGCCTGCGCGCACGCCTGCGCTATCTCGACAGCCCAGCTGGCCGCCGGGCCCTCGCCGAGCACGGCGTCTCCAGCCGTCTGCTCCGCGCCTGGGCGGCCGGCCGCACTCCCAGCCGGGCGAAGCTGGCGGCTGTCGATGCCGCGTACTGGGGTCGCCGCCGAGAGAATCTGGTCCGGTCGGGTGCGCTTAAGCGGCTCCTTGACAACGAGGGCAGGGGCCGCCGCATCGAGATCTATCCTGTGGACCAATCAGCGGTGCCGGAGAAGCGGAAGCGGGTCATCT # Questionable array : NO Score: 5.88 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCGCCTGCGGGGGTGCTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGGCCCCGCGCACGCGGGGATGCTCCG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //