Array 1 988-227 **** Predicted by CRISPRDetect 2.4 *** >NZ_BFVY01000020.1 Escherichia coli strain KK-NP007 sequence20, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 987 29 100.0 32 ............................. GGGACCGCCGTAGATGAAATTAAATCATTCAG 926 29 100.0 32 ............................. CCCTTCTCTGACAGGTTTGCGGGCCTGTACCC 865 29 100.0 32 ............................. ATCACCTTCGGCGCTTACGTCGCCGTCCGTGT 804 29 100.0 32 ............................. GGGTATATCTTGTACGCGACTGATCCTGATTT 743 29 100.0 32 ............................. GTTTTGGCGATATCACCTGATGCCTGCAATCC 682 29 100.0 32 ............................. GGGTATCGCACTGCGGCAGATGTTCCGGGGCC 621 29 100.0 32 ............................. CATGAATATGGACGATGAAAAAATAAGAGAGG 560 29 100.0 32 ............................. TTAAAACATTTTCCGAGCTTTGCGATTTATAT 499 29 100.0 32 ............................. GCGATCTCGCGGAATACACCGACGAGGCGGGC 438 29 100.0 32 ............................. TAAGGCCGTCGCCGGATCAGCCTGGCTATGCC 377 29 93.1 32 .A.C......................... TTCTTGCGGGTGTTGCAAATATTCTTCACGTA 316 29 93.1 32 .A.C......................... GACGCCGCCGCCGCGAAGCCGTTTCCGATGTT 255 29 93.1 0 .A..........................A | ========== ====== ====== ====== ============================= ================================ ================== 13 29 98.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CACTGGATGAACTACTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTAATAATAGGTTATGTTTAGA # Right flank : ACCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACACCTCATGTTCAAAATAGTTCTCCATGCCAGAGAGGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTATTTTTTTAATATTGAATTAATGCCTGTTAATT # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 83505-81768 **** Predicted by CRISPRDetect 2.4 *** >NZ_BFVY01000017.1 Escherichia coli strain KK-NP007 sequence17, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 83504 29 100.0 32 ............................. ACATACTTTGCAGGCGATCGGCAGCTCTGGAA 83443 29 100.0 32 ............................. TTCAGGAAACCGGCGACAGCTCAGCTGATAAT 83382 29 100.0 32 ............................. CCTCTGCCGCACTGGCTCCTGACAGCCTCAGC 83321 29 100.0 32 ............................. AATTTTGGCAGCGTGTAAAATCCACTTTTCAG 83260 29 100.0 32 ............................. ACGACGACGGCAGCGCAGCAAACTGGCACGGG 83199 29 100.0 32 ............................. TAACGGCGAGGGAGTGAGCGAGGTATTTATTA 83138 29 100.0 32 ............................. TTACAGCGCGTTGCGAAACGCTGCGGCGATGT 83077 29 100.0 32 ............................. CAAATATATTTTGCGTTAATTATTCGAGGTAA 83016 29 100.0 32 ............................. GCAAAATATTCAATCACCCCACTGGGTAAACC 82955 29 100.0 32 ............................. GAATACCGATTCATAACGGCGGAAATGTGGAT 82894 29 100.0 32 ............................. TGGTTTGAGCCGTTTAAAGTTGAACAGGCGAC 82833 29 100.0 32 ............................. GCTTTCAGTCGAGTGGCAGCTACGAGGAATCG 82772 29 100.0 32 ............................. GACACGGATAACAGCTACCTGCAAAATTTAAT 82711 29 100.0 32 ............................. GCCCAGAATCTCTTTTAGCGCAACGATATTCC 82650 29 100.0 32 ............................. GCTCCGGTTTTAAAATAAACCCGGCAAAAACG 82589 29 100.0 32 ............................. TTAACGCGAAAGCGTCGGCGGTCAGTCGGCAG 82528 29 100.0 32 ............................. GAATATCGGGTGCCAGCCTGGACGCTGGCCGA 82467 29 100.0 32 ............................. ACGCGAATCGGCGGTTTTGAGCGGGTAGCAAA 82406 29 100.0 32 ............................. GCAAACAGCTAACCACCGCCGGGGCGGTTTCC 82345 29 100.0 32 ............................. CGATGATGTAATAATTAGAGCAGAATCCAGTT 82284 29 100.0 32 ............................. CAAAATTTAAAATCATTTAAGCTTGTAAAACC 82223 29 100.0 32 ............................. GGTACACGGATATTCTGTCTAAAAGTTAACTA 82162 29 100.0 32 ............................. ACTGATAACGCCGGAGCCTTCTTTTTCAGCAA 82101 29 100.0 32 ............................. AGGTTGACGTTGATTTTGTTCGTTATGTTGCC 82040 29 100.0 32 ............................. GCGTCTCGAGCGCGGGACGATTCAAAACCAGC 81979 29 100.0 32 ............................. CCAAAGAAGAACAACGAGCCAACTGGTTTCAG 81918 29 100.0 32 ............................. GCAATTTGTTGTCCGCGATCCGGTACGCGCGT 81857 29 100.0 32 ............................. CGGCTATGGAATTTATGGAGAAGTTTGGTTTT 81796 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 29 29 100.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCAGGTGAAATTGAACCGCCACAACCTGCGCCGGATATGTTACCGCCAGCCATCCCCGAACCTGAAACGTTGGGCGATAGCGGTCATCGAGGACGCGGCTGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCGCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATTACCCAACTGGCAGGTTGTGGAAATGTGGTCATGGCCTGGGCGACAAATACTGAGTCTGGTTTTGAGTTTCAGACCTGGGGCAAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTAGACGTTCTTTAAAAATAAGGAAATGTTTGAATTTAGTTGGTAGATTGTTGATGTGGAATAAATTTGTTTAAAAACAGATATGTATGCTTAGT # Right flank : GGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAACGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCTATTCCGTGACTGCGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //