Array 1 278200-274137 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHBFW010000001.1 Leuconostoc gelidum subsp. gelidum strain PLK1c NODE_2_length_378079_cov_81.012077, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 278199 36 100.0 30 .................................... CGTTGGTCGATTGGTTAAGATGTCTTGAAT 278133 36 100.0 30 .................................... CGAGAAACTTATGCAGCGATTGAATTCTCT 278067 36 100.0 30 .................................... CGATATTGATGTTGTTTATAACGACTTAGA 278001 36 100.0 30 .................................... AACAGTTTTCACCATAGTTGCCAAATTCTT 277935 36 100.0 30 .................................... TGATACCAGTAGCACCTGACATATCAGTAA 277869 36 100.0 30 .................................... GCAGGCAACACGTTCACATCAAATTGGTAT 277803 36 100.0 30 .................................... TACTAATCGTTCTGCGAGCAACGTTGACAC 277737 36 100.0 30 .................................... TGAAGAATTAGAAAGTAAAGGTAAATAAAA 277671 36 100.0 30 .................................... TTCAGTCGCTGGATATGCTAAGGTTGTAGG 277605 36 100.0 30 .................................... CGATGGAGATGTGCTTTTCACACTTTGGAG 277539 36 100.0 30 .................................... GTTGTGTTTGACAATATCAGCGCATTACAG 277473 36 100.0 30 .................................... TGAATGCAATTCCGCTAACAACTATTATAG 277407 36 100.0 30 .................................... TTCTGGCAAAGAGATTCTAACGGCTCTTGG 277341 36 100.0 30 .................................... CATCATTTAATGATTGTAAGGGTGTTGGTG 277275 36 100.0 30 .................................... ATGATAAAAAGAGAGTGATGTTAACTCTAA 277209 36 100.0 30 .................................... CATCAACAAGACAATTATGCGTTGTCTTGT 277143 36 100.0 30 .................................... TCTTACAGCTATTATCCACTAGACCCAACG 277077 36 100.0 30 .................................... CGCAGCTAGTACGATGCTCACTGCTTCTGA 277011 36 100.0 30 .................................... TTGAAAGCTGTCAAGCCGTTAGCTGATGAG 276945 36 100.0 30 .................................... CTTTGCATAAATTACATTTGACATTAGTAG 276879 36 100.0 30 .................................... ATAATGGGGAACTAATCCGCTACGGTGGTG 276813 36 100.0 30 .................................... ACTGATTGTATCGCCTGACTATCATTCTCC 276747 36 100.0 30 .................................... AGGGTTTTTGAATGCACAACTTGAATCAGA 276681 36 100.0 30 .................................... TGTTTGTAGTGCCCCATATTTGGGACATAA 276615 36 100.0 30 .................................... CCAGTGAGCATCGCCGATGCCTCTTTTTTC 276549 36 100.0 30 .................................... TCTAGTGAAAATATATCTGCAATTAATGAA 276483 36 100.0 30 .................................... AAATGAATATATCAGATTAGCGGAGTTGAT 276417 36 100.0 30 .................................... TTTGATAATTTAGGTGCAGAGACGCCTATT 276351 36 100.0 30 .................................... TAAATTACTTTCAAATCATTCGTTACTATT 276285 36 100.0 30 .................................... TGAGGCTTATGTAATTCCTTACGGAAAACG 276219 36 100.0 30 .................................... AAAATACTCTTGCTTATCAATATCACCCGG 276153 36 100.0 30 .................................... AGCCTTATCGGCTTCAAGACCATGGTTCGA 276087 36 100.0 30 .................................... TGAAAATAATGCAGAGACGAGCGTTGACAA 276021 36 100.0 30 .................................... AAAGGCAGAAGGATAATATCATGATCATCA 275955 36 100.0 30 .................................... TCGATACATTGTATTCTGTATCGAGGGCTA 275889 36 100.0 30 .................................... GTAGTTCAGCGGTATTGCCAGCTATGCAAA 275823 36 100.0 30 .................................... ATACATAGGAAATGTTCGATAGTGAAACAA 275757 36 100.0 30 .................................... AAGATACGGTATTATCATTATCATTACGTT 275691 36 100.0 30 .................................... TTAAGAAAACAGGTATTTAATCATGGCAAA 275625 36 100.0 30 .................................... ATCCAATGTAGACATCACGACCGTGAACAT 275559 36 100.0 30 .................................... CTTATCACATTACTATGAGAGCAGACTGGC 275493 36 100.0 30 .................................... CGGCTCCAGGTAAAGGTAGCCCACCCAAAG 275427 36 100.0 30 .................................... TCTGCCATTCTGTAAGTAGAATACAATGAG 275361 36 100.0 30 .................................... TTAAAGGAGCAGAAATGAACGATATCCAGA 275295 36 100.0 30 .................................... AATTAGTTGTTGAAGAAAACAACACGTATA 275229 36 100.0 30 .................................... ACAAAGATACGCTTGGACTGATAGCACATT 275163 36 100.0 31 .................................... TGATGTTATTCAAACTTTAGCTTATGGTAGT 275096 36 100.0 30 .................................... TTCAAACTTGCGAGCAACAACTGTATAACT 275030 36 100.0 30 .................................... AAGTGTTTAAATGTCATAAAAGCGTTGGTG 274964 36 100.0 30 .................................... GCGCTTCTCTTATTGATAAAGTATTTTCTA 274898 36 100.0 30 .................................... GACCAAACTTTTGCAATGTTTCCCTGTTCA 274832 36 100.0 30 .................................... TGAAGAGGTTCCAATCGTGTAAGTCTTATC 274766 36 100.0 30 .................................... CCACCATTAGCGTATCCATGGCCTTGTCCT 274700 36 100.0 30 .................................... GGTACCGCCATGAGGATAACCCCTTGTAAT 274634 36 100.0 30 .................................... TCTACGTGAACTAAACAAAAGTAAGGAAAA 274568 36 100.0 30 .................................... ATGGTTCAACCAATTAAATTAAAGTTGTCG 274502 36 100.0 30 .................................... TGTCGTAATCACGCTCTGCCTCACGCTCAT 274436 36 100.0 30 .................................... ACAGCAGTTGGAGTTTGGCAATGATTAAAT 274370 36 100.0 30 .................................... ATAGTGGATACTCCTACAGACAATAATTCA 274304 36 100.0 30 .................................... ATGCCCGTACTGTCGTAGGTTTTATTCAAG 274238 36 100.0 30 .................................... ACCAGACCTTTATTGCTCATCCACGTGGCT 274172 36 94.4 0 ..............................C...A. | ========== ====== ====== ====== ==================================== =============================== ================== 62 36 99.9 30 GCTTCAGATGTGTGTCAGATCAATGAGGTTTAAACC # Left flank : GGTGCGCAACTGGATGTGAATAAGTTGTATCAAAAAAATATCGTTAATACAATGAAAAATTATGCAGATGATCAAGCGTTAGAAGTGTTTTATAAAATAAATTCCGAATTAAATCATGTCTTAGAAAACATTATATTAGAGAACAATCTGCCCTTTTATTTTCAAACAGAATTCAATATTGTCGAATTAATAAATGAGAAAAAAATTAGGATAGAAACACTGACAAACAGCTCTGGATTTGGTAAAATAGAAGATGTAGTAAGCGTTGCTGGTGAGTTTTCAGAGCAACGTTTAATCGTTTTTACGAATTTGTATTTGTTGTTATCGGTTGATCAGATTGACTATCTGAATAATCTAGCGAAGACAATGAATTTATGTTTAATTTCTCTTAATTTGACACAAAACCCTGTTATGACTAAACAGGGTCTACCTCCAGAAATCTTTATTGATGAGGATTTCGTTCAATTTGGTGCTGATTAGCTGATGCGAACAGGCGGTCT # Right flank : ATATACATGGCAATCTATTAAATACCATATTAATAAGATGAAAGCGCTTAGGCGCTTTTTATATGCCATATATGTCAAAAAATAAGTTTATGCGAATAACGATTATGTTATAAATAATCACGTCAAACGTGAGATGGAGAAAGGGAGATTTTCCTGTTTAGGTAAATAAAAAATTGCGAGTGAAAGAACTACATGTTTCAACAATAATTATTGGTGGCGTTCTGGGCACCATGTCTACGGTTAATGCTGCTGAAAAAACAGCGCATGTATCGATACAAGTGTCAAGTACAACCGTATCAGGTTCGAGTGCTGTATCACAAGCGCCAAGCACTAAGACATCAAGTGCAACAATAAATGAAGCTAAAAAATGATAGTTATAATGTAACGCCGTCAACTCGATCTATTCAAATATCTCTAGCCAAATTTAAAACCGGTTCTGTAATTGTATTGACCACTCCAGCAAAAACGTCCAATGGCACACAGCTTCAAAATTATGGTGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAGATGTGTGTCAGATCAATGAGGTTTAAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //