Array 1 68945-76230 **** Predicted by CRISPRDetect 2.4 *** >NZ_SNXQ01000013.1 Kocuria sp. AG109 Ga0222376_107, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 68945 28 100.0 33 ............................ CCCCCGTTGCCTTTCGAGGCTCCGGGATCCCAC 69006 28 100.0 33 ............................ GAAGACCGAGCACGGAAACTGCTGGATCTGGCA 69067 28 100.0 33 ............................ CCGCGTTGGTGCTGTACTCGCACACCCTGAACT 69128 28 100.0 33 ............................ CTTCTCCCTCTGGAGGCACGCTCGCGGCAGCCT 69189 28 100.0 33 ............................ GGGGACGGCGAACCGCTAGAGACCTGGGATATA 69250 28 100.0 33 ............................ CCATCACCGCCCGCGTGATCGACAAGATCCGCA 69311 28 100.0 33 ............................ GCGGTCTTGCTGACGCACGCGCACATCGACCAT 69372 28 100.0 33 ............................ TGGGTCAGGCCTTCGAGCGGCAGGAAAGGGTTA 69433 28 100.0 33 ............................ GGTGAACGGCATGTCATTCCCGCGGTTGTCGAA 69494 28 100.0 33 ............................ CGGCAAGGGCGATGTTCCGAATGAGGGTGGGGT 69555 28 100.0 33 ............................ GAACGGGACCAGCACCGTGGAGAACCAGGTGTA 69616 28 100.0 33 ............................ GGGCTTGTCCCAGATGGGGGTGTGGTCGGGGTA 69677 28 100.0 33 ............................ GGCCTGCCGGGCCTGGACCCACTGGATCAGCCA 69738 28 100.0 33 ............................ CCGGCGCCTGAACACCAGCCGCCCCAAACAACG 69799 28 100.0 33 ............................ GTGGGCGAGGAGTGTGCCAAACTGAGGACACAC 69860 28 100.0 33 ............................ GATGCCTCCCCAGATGATGTCCACGCGGGTCTT 69921 28 100.0 33 ............................ CTACCGGGACGTCACCACCATCAACTGGGCTGA 69982 28 100.0 33 ............................ CACCTGGCTCGCCGCTGAGCGGGCCGCCGCGTG 70043 28 100.0 33 ............................ GAGATCGGCGTGCGGTTGCCTTGGCGGGCACCG 70104 28 100.0 33 ............................ CCCCATCACCGCGGTCAAGGCCCGCAAGCGCCC 70165 28 100.0 33 ............................ GCAGGTGGCCCGGATCTACCCGGCGGGTGCGGG 70226 28 100.0 33 ............................ CGCCAGCGACGCATCCCCGCGCCGCATGCTCGT 70287 28 100.0 33 ............................ GTAGCCCCAGTCATCCCATCGCGTCCCGCATAG 70348 28 100.0 33 ............................ GGGGATGCACAATGGCTCGTGAAGCGGCGCGGA 70409 28 100.0 33 ............................ CCCTTGCCCAGATGGTCGCGGATTCACCGGGCA 70470 28 100.0 33 ............................ GCGATTCGTTCGCGGCACGGTTCAGGGCGCGCG 70531 28 100.0 33 ............................ GATCGCCCTTGATTCTGGGCGCACCCTCTCCGA 70592 28 100.0 33 ............................ GGTCGGCCTGAGGGCGTCGGTGGGGTCGAACTT 70653 28 100.0 33 ............................ CAGCGGGATGTACCGGCGGCGGGAGGTCACCAG 70714 28 100.0 33 ............................ GCCCCGCAGCTCCAGGACACCGTGCTGCAGGCG 70775 28 100.0 33 ............................ GGAGAAGACCGCATGACCCGCATCTCTGAGACC 70836 28 100.0 33 ............................ GCACTCGGTGCGATCATGAATGACCGCATCCTG 70897 28 100.0 33 ............................ GATTAGCCTGATTGACCTGCTGCAGGCCGCCGA 70958 28 100.0 33 ............................ GTCCCTCACCGGCCGTGTTGGTGCTGTACTCGA 71019 28 100.0 33 ............................ GTGCCACTCCAGCGCCCCGATCAAGGGCAGCGG 71080 28 100.0 33 ............................ CCAGTGAAACGGCGACGGCGGCGGGCCGGGATC 71141 28 100.0 33 ............................ AAGCCGGGGCCGACTAGGCATTTGCCCTAGTCA 71202 28 100.0 33 ............................ GAACGAGAACCGCGACCAGCTGCTCGCCAACGC 71263 28 100.0 33 ............................ CTGGAGAATGTCCAGGCGCGCGCCCAGATTGGC 71324 28 100.0 33 ............................ CCATGTCGTGTTCGCCGGTCTGGACCGGAGGGA 71385 28 100.0 33 ............................ GCCATGCGCCCTCCTTGGGGTATGGGAAGGGCC 71446 28 100.0 33 ............................ CCTCAGAAGAAGACCACCGTTTACATGCCCCTC 71507 28 100.0 33 ............................ GAGACCGCCGCCGCCCACGCCGCCCGGCGGCTC 71568 28 100.0 33 ............................ CAGCTTCTTAGCCCATCCCGGCATGGACACGTG 71629 28 100.0 33 ............................ GAACGACAGGAGCCCCCGCTGATGCTCGGAACC 71690 28 100.0 33 ............................ CCGGTGGTGGTCTTGCCCATCTCCTCGGCCGCG 71751 28 100.0 33 ............................ GCCGACCGGCAGAAGGCCCGCGGGTTCGTGGAA 71812 28 100.0 33 ............................ GCTGTGACAACTGCTGTTGAAACAGGCTGGGCG 71873 28 96.4 33 A........................... CCCTTGCCGATGAGCCAGGCCCGCGCCAGCCTG 71934 28 100.0 33 ............................ GAGAGTGGAGTTGCGCCCCTTCGAGGGCTTCCC 71995 28 100.0 33 ............................ TGGTTCAACGATCTGAGGGACAGTCACGCCCCA 72056 28 100.0 33 ............................ CTGATGCTGCGGCTACTGGACTCGTTGCCTCCG 72117 28 100.0 33 ............................ GACCCTGGGGCACCAAGTGCGGCCCGTGATGGC 72178 28 100.0 33 ............................ GGTCTACGAGATGGACCTGGCCCCGGAGTCGGT 72239 28 100.0 33 ............................ CTGCTCAGGCGTCACCTCCACAGCAGCCTCCAG 72300 28 100.0 33 ............................ GCTAGAGCCCGCGCATCAGGGCCCGGGAATCCG 72361 28 100.0 33 ............................ CACATACAGGAACTGACCGCGTGAGCGGTCACA 72422 28 100.0 33 ............................ GCAGGTCACGGCAACACCGGAGATCGTGGACAC 72483 28 100.0 33 ............................ AGGCTGCTCAGGGTCTTGTGGAGCATCCCGGTC 72544 28 100.0 33 ............................ TACGTGGATGCCGTTGCCAATGCGATCAACGCA 72605 28 100.0 33 ............................ CTCGGGTGCTGGCACCAGGACCCCTCCGGCAGC 72666 28 100.0 33 ............................ CGTATCAAACCGGGTCTGGCGCTATCAGAGCCT 72727 28 100.0 33 ............................ GCGTTCACCTGTGCGGCCGTTCTGCCGGTGTTC 72788 28 100.0 33 ............................ GTAGGCCACGAGCAGATCGCCGTTGACCTCCCA 72849 28 100.0 33 ............................ GACGGCCCAGGCGGAGAACGCGGAGAACGTGAA 72910 28 100.0 33 ............................ GTGGGCGGAAGTGTTTCCGCCAGACCGGCAGAG 72971 28 100.0 33 ............................ CTGCGTGCCATTCGCCTGCGCGGGGATGAAGGT 73032 28 100.0 33 ............................ GAAGGATGCTGCCGCATTGATTGGCGTCAGCCC 73093 28 100.0 33 ............................ GAAAAGACCGCAAACGAAATTGAAGGGGATACG 73154 28 100.0 33 ............................ GCCAACCATTGTCAAGAGTCTGCCACGTGGTGT 73215 28 100.0 33 ............................ TAAGCCGGACTCCGCGGTGGGGACCCTGATGGA 73276 28 100.0 33 ............................ GCGTGGTCTCGCACTGGCCCGTCTTCGTGCTCA 73337 28 100.0 33 ............................ CCCACCCGCAGGCACCGGCGAACACCCTCCATG 73398 28 100.0 34 ............................ ACTCGTGCGCCCTGCCGACCAGCCCGAACGCCTG 73460 28 100.0 33 ............................ GCCGTCGCCGATGGCGCGGATGCGTTTCACCAC 73521 28 100.0 33 ............................ TAGATGCTGTGCAAGTCTTGTGCTTCCTCGCTC 73582 28 100.0 33 ............................ GACTGGACGCATATAGCGTTCGGCGGTGACAAC 73643 28 100.0 33 ............................ GTTCTCCCGTGACATCAGCGTGACCCAGGACGG 73704 28 100.0 33 ............................ CCCGATGTCGGTTGTGAGCTTGTCGATGAGGTC 73765 28 100.0 33 ............................ GTCATGCGGGGCCCCATCACGGGTGGGGGTCTG 73826 28 100.0 33 ............................ GAAGGTACATGAAGCGCTCGCGGCCGTCATGGA 73887 28 100.0 33 ............................ GCCGATCCAGTTTGTGGTGGATAAGGTGGTGAA 73948 28 100.0 33 ............................ GCACATCGTGTCCATCGGGCTCACGGACAAGCT 74009 28 100.0 33 ............................ GATCGGGACAATGACGCTGTTCCACGCCCACGA 74070 28 100.0 33 ............................ CGTCGCGAAGATGCTGGGCCTGTCGCAGAACAA 74131 28 100.0 33 ............................ GGTCTTCGGGCACCGGGATTGGCACAACACCGC 74192 28 100.0 33 ............................ GGTCTTCGGGCACCGGGATTGGCACAACACCGC 74253 28 100.0 33 ............................ GAACAGGGCCACACGGGGCATCCCGGACAGCCC 74314 28 100.0 33 ............................ CGCTACACCGCCGCCGCGGGCGGTGCGGGCCGC 74375 28 100.0 33 ............................ GGGCCGCCCGGCGCGCCGCTCGTCGTCAAGCCG 74436 28 100.0 33 ............................ GCTCCTGCAGGCTGGTCGGTTCGTTCACGCTCA 74497 28 100.0 32 ............................ CGTCCCAGCCCACGCCTCATTCCGGCCTGCAC 74557 28 100.0 33 ............................ CGCGATCCTGGATTCCCCGGGTGCTGTGGTGAC 74618 28 100.0 33 ............................ GCCGGAGCAGAACGCCGATGACGGTTCGTGCAC 74679 28 96.4 34 ................T........... CCTCTACGGCGACGCCGACTCCAGCGACCCCAAC 74741 28 100.0 33 ............................ CTGCACGCCGCGCTCCAGCACCCCGCCCCCGTC 74802 28 100.0 33 ............................ GGTCAGATAGTCGACCTCCCCGAACCGCTGGGG 74863 28 100.0 33 ............................ CCTCTCCTCAGGGGCCAGAGTGGAGGGAAACCC 74924 28 100.0 33 ............................ GGACACCACCGGGGCCACCGACGCCTTCAACTT 74985 28 100.0 33 ............................ GCGCGGTTGCGGTCCTGCGGCCCGGTCGACGCC 75046 28 100.0 33 ............................ GCCCCCGACACCACCAACGAAAGGCAAGACCAT 75107 28 100.0 33 ............................ GGACCTCATCCGCAACGAAAAAACGTACCTGGC 75168 28 96.4 33 ......................C..... CAGCTCCACCATCACGTCCCGGATCCGCATGGG 75229 28 96.4 33 ..........................T. GGGAGATAACGTCTCGTTCTCGTTCGAATGGTT 75290 28 100.0 33 ............................ GCGGGTCTTGACCGTGACCTTCTTGCCCAGGCC 75351 28 100.0 33 ............................ GATCGCCGCGGCCGCCGGCGCCGGGCGGGTCGA 75412 28 100.0 33 ............................ CTTATGCTCCGGCATCCCCTCCCCCGGCTTCCC 75473 28 100.0 33 ............................ GGGCGGGGTGACCCGGCAGATCCCCATCCACCC 75534 28 100.0 33 ............................ GCTCAAACCGGCGGGTATCGTCCACGCGGACGA 75595 28 100.0 33 ............................ GATCACCCACGCCACGCTCAACACCCGCGCCGG 75656 28 100.0 33 ............................ GCCCGCCTTGTTCTGCTCCTCCGTGCACTTCGG 75717 28 100.0 33 ............................ GAACCACGCATGAACCCCTACCTCCAGGACCTC 75778 28 92.9 33 .........A............C..... CAGCTCCACCATCACGTCCCGGATCCGCATGGG 75839 28 100.0 33 ............................ GGGCGGTGACCGCACCGAAACCTGGACCCTTGA 75900 28 96.4 33 ...............A............ GTCGTGGCTCGGATGCAGTTCTCGCTCGACCGG 75961 28 96.4 33 ...T........................ AGAGATCGCTGACTCCGGCGGGAAGATGGGGTC 76022 28 100.0 33 ............................ CGTCAAGGGCGGCTGCGGGAAGTCCACCCTGGC 76083 28 85.7 33 ...........TT.GC............ CATGGACCACACCCTTCGGGTACTGTTCGAGGA 76144 28 82.1 32 .T..........T.GC...A........ TGCGTGATCCGGCAGAGCCGCAAGTCACCGGC 76204 27 75.0 0 .T.........AT.GC..A....-.... | ========== ====== ====== ====== ============================ ================================== ================== 120 28 99.3 33 GCCCTCCCCGCGCATGCGGGGATGAGCC # Left flank : CACGGGAGAGGACGGCGTCGAACCGGGAAGGAACTATGCCTTCGAGGACGAGGACTCCGCGTCATGATGGTCCTCGTGCTCACCGCCTGCCCAGCAGGTCTTCGCGGCGACCTGACCAAGTGGCTCTTGGAGGTTAGCCCGGGGACATTCGTCGGCAATGTCTCCACCCGGGTCCGTGAGAAGCTCTGGGACCGAACGAAGGAGCTGTGCCGAGACGGGAGAGCACTGCTGGTATATACATCGGATGGCGAGCAGCGCATGCGCTTCGAGACTCACCGACACGACTGGGAACCCGTGGATATGGAGGGCCTGACGCTGGTCAGACGGCCCTTGCCGAGCAGCCGATCCGCCGAGAAGAATCCCCGGCGTACCGGTTGGAGCCAGGCATCCGCAGCCGCCCGCAGCCGACGCCCCTCCTGGAGACGATCGCGCTGATGCGGCACTCCGTTAAACTGAATCTGAACCGGCCGACTTCCTGACGTATCCCCAAGTCAGGAAGA # Right flank : CCTCGCGTGAGCATCTCGAGCAGGTTGTCAGCGAGTCATACTCCCCAAGCAGCAACCGTCGCAGACCCCGCTACGGCGACATGTAAAAAATTCTCCAGATTTTTTACACGTTCAGCGGACCTGCAAACCTCTTTGACATGTCGTGAGCTCCGCCCCGGAACGCTCCCCCGCGCCCCGACCCCCGAAACACCAGCCCGCTACCATCACCCCATGTCGCACATCACCCCCACCAACGACACCACTTCCACCACCGACGCCACCCGCCCCTCCCCCGCCTTCCTGCCCGCCGCCGAGACCATCGGCCCCGAGCTGCGGGCCTTCCGCCGGGAGCTGCACCGCCAGCCGGAGCTGGGCACCCACCTGCCGTGGACGCAGCAGCGGGTGCTGGAGAAGCTGGAGGTCCTGCCCCTGGAGATCACCACGGGCCGATCCCTCACCTCCGTCACCGCGGTGCTGCGCGGGCAGGGTCGGCCCGCCGCCGCATCCGCTGACACCACCAC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCCTCCCCGCGCATGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGTGCGGGGATGAGCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-23] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //