Array 1 23927-25528 **** Predicted by CRISPRDetect 2.4 *** >NZ_VWSP01000001.1 Streptomyces sp. LBUM 1486 LBUM1486seq1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ===================================================================================================================================== ================== 23927 26 96.2 36 T......................... CAGCACGCGGGGAAAGACGGGATACCAGCGGGGCGC 23989 26 76.9 33 .C.......GTA...A......C... CACCTCCCCGGCGTGTACCGCACGCAGGAGAGG 24048 26 80.8 35 TC.......G.A..........C... CTGGAGCACGTCACCGTTCTCGCCCAAGCTGCCGG 24109 26 76.9 34 ..........TAT.C......TC... GCCGGTCAGGGCAAGAAGGCCACCTTGGTCGTGT 24169 26 84.6 33 .C.....G...A.........T.... GGCCGGGCATTCCCGTCCCACATACTGAGTACG 24228 26 96.2 36 .C........................ CCTGGTTGCTACTGCCGGATGCTACTCACCGCGAGT T [24230] 24291 26 88.5 35 .C.......C..T............. CGCCGTCCGCGACCGTCTGGAACCCGCTCAGGCCG 24352 25 88.5 133 .C.........-..........C... GTGCAGCAGGTAGCGTGCCGGGCTTTGGGCTTGCTCTCACCACATATGCGGGGGTCTGCCGTTCGCCAACCGGGCACAGGGGCGACCATGCACGACTTGCCGACGAGGTCATGCCGTTTCCGTGCGTTGCCGC 24510 26 88.5 64 A..........A...........C.. CGTCGCCCACTCACGCACTGGAGTACGGTCGATACGACCGGCTGGGTCGCCAAGAAGTACCTGT 24600 26 96.2 35 .C........................ TTGCAGATCGTCCCCATGCTCCGCGATCATGTCGT 24661 26 96.2 35 ..........G............... TGCGGCCTCCGCGAGCGTCGTCTTACCGGTGCCGT 24722 26 88.5 35 ..........TA.........T.... CTTCGTGTCGTACGTGCTGGTGACAACGACAGTGC 24783 26 100.0 35 .......................... CATGTCTTCCGGCTTTTCTCCGGGCTGGAGGAAGT 24844 26 92.3 89 ........T.T............... CTCGTAAGCGACTGCGCCATGGGCACGTCTTCTCCGTTACACGCGGGGGGTTCTCCCAAGTCTGGGATACCGACCACGTGCACACCCGT 24959 26 88.5 35 ......T....A.....C........ CGTCCGAGGCGGCGTAGCTCTGGGCCGCACAATAT 25020 26 92.3 35 .........GT............... CCGCAGGGAGCCGTTGTCAGGCGTCACGCGGCAGT 25081 25 76.9 35 G........G.AG......A...-.. CCAGCTCCTCGCGACTGCCGAGGAAGTAGTCGCCG 25141 26 69.2 33 TC.G.....G.AT.C.........C. GTTCGCTAACCGGGCACAGCAGTCCGTCGCCGC 25200 26 96.2 35 A......................... CGCCGTCCGCGACCGTCACCACACCGATGCTGGGT 25261 26 96.2 35 .......G.................. CGGGCCGCCTCCGTCCGCTCGTCTATGAACCCGGT 25322 26 88.5 35 .........GT......A........ CAGGGTGTTGATACTGCCGAAGGTCCGCTCAACGT 25383 26 88.5 35 ........T..C............C. ATCGTCCAAGGTGAGGCCGACGGCGGGGTTCACGG 25444 26 80.8 35 ...TT..C.C............C... CTGCAGTACGTCACCGTTCTCGCCCAATCTGCCGT 25505 24 88.5 0 ............T..-......-... | ========== ====== ====== ====== ========================== ===================================================================================================================================== ================== 24 26 88.2 43 CTTCCCCACACGCGTGGGGGTCTGTC # Left flank : AGGGTGTCGCTGACCCGGGCCCAGGGATACGCCTCCTGTTCCTGGAACGCCGACAACTTGCCGAGATCGTGCAGGCCGGCGATGAACATCACCAGACGGCGCGCCTCGGCCAGGGTGAGCCCCAGCCCGTCGGCGATCAGCCGACGCTGACCGCGGGTCAGGTACCGGTCCCAGACCACGCCCGCGAGCGCCGCGACATCCAGCAGATGAAACAGCAGTGGATACACCGCCCACGCGCCGCGGTCGAACTTGCCCCACGGCGTCAGATCGATCCCGCCGCGCCGGGCATCCTCCCGCACTCCCACCGAATGCTCCCGCTCCGCTCTACGTCAACTCACCCTGGAATCACGGGCGTTGCACCTATCCTGCCGCATGCAGAGCATCTCCCCCGGCACGCATCCCTGGGAGGGCAGGATGTAGCCTGCGATTCAGGTCTCACCGGTTTCCTCATCCTGTGAGGGTGCTCCCCTGCTGGTCATCACGGGCCGCTCAGGGCCCTG # Right flank : CCCACCCCGTACTCCTTCTGCATCTTCATCGCGATGACTTCCACACGCGTGGGTTCACCCTGGTGTCCTCTCCCCCGGGGCATACGGAGAGGAGTCGGTGAGGTCGTGGCTGGTGCAGGCCTGGCGTTCGGCGCACGCCGAGTTGTACCGGTTCCTACTCTTCGTGTTCGAGCCTCCCCCACGGCTCGTAGGGTTTTGCTTCCGGCTGTCGCCCGTCTCCCACCCTGAAGACTGGGCGACCGCTGCTGATGTACCCGATCCGCCAAGCGATGGCGTCGACCGGTAATCACAAGCCGGCAACCGCTCTCGTACGGCCTCTGCCGCAACCTGCTCATGGGTGGATCACCGGGACCGTCAGCCAGTACGATCCCGCGCCTGCCCGCGTGCGGCCGAGATGATGAGTAGCCGTCAAGCGGGAGCCGCCGCGTTCTACAGGCCGATGGCACCCAAGAGCATGGCTGCACGGTCGGCGTCAGTGGTCTCCACTGAGGTTCCCCCGA # Questionable array : NO Score: 3.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.46, 5:-1.5, 6:0.25, 7:-0.31, 8:1, 9:0.14, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCCCCACACGCGTGGGGGTCTGTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.90,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [7-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 30974-31832 **** Predicted by CRISPRDetect 2.4 *** >NZ_VWSP01000001.1 Streptomyces sp. LBUM 1486 LBUM1486seq1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ========================================================================== ================== 30974 26 100.0 35 .......................... CTCGGCGACGACGAACTGGAGCCGCCCGTCCCGGT 31035 26 100.0 35 .......................... CCCCCAGCGTCCCGTCAGTGATGTCGCGCACCAGT 31096 26 92.3 35 .....................AG... CTCGTTCCAGCGCACCGACAGCCGGTGGCACTCGT 31157 26 88.5 34 .........G..T..........C.. CTCGCTGACGAGCATCTTCGGGGTAGCGGCCGGT 31217 26 76.9 37 AC......TG..T...........C. TCCCGTCGTCGAACAGATTTCCCTGGGCCAACGGTCA 31280 26 92.3 35 .........GT............... GACGACCGCGTCCCGGCCCACGATCCGCCACCGGT 31341 26 80.8 35 ....T...........AA.A....C. GAGGCTAGAGCAAAAGCCAGCGGAGCAGCCGGAGT 31402 26 84.6 35 .AG........A..........C... CGGGACCGCCACCGCGACGTACAGCCCGTTCGGGT 31463 26 100.0 74 .......................... GGTGGAGGCGGTGAACACCGCGATCAGCAGGGGGTGGCTCGGCCATCGGCTGATGCGTCATCGTGCCCGCAAGG 31563 26 88.5 34 G.........T..........T.... TATCACTGACACCGTCGCCGCTCGTGCCATGTTC 31623 26 92.3 36 G..........C.............. CACGAACGAAGCCACCGCCGACTTGGTGGTCGACGC 31685 26 88.5 35 ...........A........G.A... CCAGTAGCAGGCCCCGTCGAGGGTCCACTCCCAAC 31746 26 88.5 35 .........T............G.C. CTCGATACGGCAGTCATCCTCGCTGCCGGCGGCAT 31807 26 84.6 0 .......GG.........A...C... | ========== ====== ====== ====== ========================== ========================================================================== ================== 14 26 89.8 38 CTTCCCCACACGCGTGGGGGTCTGTC # Left flank : CTCCCGGTAGAGACCGCCGAGCACCTCCTCACCCGTGCCCGACCGCCACACCGGCGGCTGCTCGCCGTACCCCGCGCCGGAGCCACTCGATCCCACAGCGGTAACCACCGCACCACCAGACGGCACGGAAACCGGCGAACTCACCGTGCTCTCCTCAGCCAGCACCGACACGAGCTCCTCACGCCCCCACCCGGGCCCGCTCAACTCGCTCCCGCGCGGCATCCACCTCCGCCTGAGCCTGCTCCAGGACCTCCGTCCAGGACTCCAGATCCTGCCTCGCCCGCGCCTCACGCCGTTCCATCAACCCCAGCACCGACGGCATCGCAGCCTCCTCGATCAACAACAAGCCGTCCGCTGCCTGCCCCTATCCCTCCGCGGCCATGCCCCGCACACGAAGAAGCCCCTGCTCACCGAACAGGGACTCCCTTTGCCACAACGCACTCAGATAAACTGAGTGCAATACGGCCTGCTGATCTTCAGATACGCAGGTCGTCAAGGGT # Right flank : CGAGTCGGACTTCGTCGTACGACAGACTGCACGCGCTCCAGAAAGATCGCCGACTTCCGCTCCCGGGGCTCCATCGCCTGGGGTCCAGATCCAACCGGATCAGAATATCTGAAATGTCCCCCTCAGTGCCCCGCCTGGCCGCTGGCAGGCACACCCCTGCCTGAACCTTGCGGACATCGAAGCACGCAACCCCTGAGCCAGGCGTGGAGCGAACGACCAGCAAGGCCAAGCCACTTGATACCCCAGGCGAAGAGGCCCCAGGGCACCGCCAGACGACCAGCCACCAAACTGGGCCTCCACTAGGGTTGGGAGAGACGCCTGCAGGTCAGGCTGCCATCCCTATGGCGTTCTCATCTCGCCGCGCTGGAGATTCTCAAATAATGTCATCAAGCCTTCTCATCTGACGTCACCTTTTATCCGCTGTGACCAGCAGAGATGCATGACATTTAAGTGAGAACTGATGGTGGCGCCGGGATGAGAAGTCGCACGCAGGCGCGCGA # Questionable array : NO Score: 4.87 # Score Detail : 1:0, 2:3, 3:0, 4:0.49, 5:0, 6:0.25, 7:-0.21, 8:1, 9:0.34, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCCCCACACGCGTGGGGGTCTGTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.90,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [11-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //