Array 1 842214-841584 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_KQ970818.1 Streptococcus infantis strain DD18 scaffold00001, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    842213	    36	 100.0	    30	....................................	AAACTCCCAATGAGTATCTTGCGGTGACCG	
    842147	    36	 100.0	    30	....................................	GACATTTGACTGAAAAGTGGTACACTAGTA	
    842081	    36	 100.0	    30	....................................	TCAGTGGACATCCCTTTCGTGCGTTCGTCC	
    842015	    36	 100.0	    30	....................................	ATCGACGCCCTAATTGACTACGAACTAGGA	
    841949	    36	 100.0	    30	....................................	TACACAAGCGGATAGCAGGGATCGAACGAA	
    841883	    36	 100.0	    30	....................................	AAAAATAAGGGAGATGAACATGCTAAAAAC	
    841817	    36	 100.0	    30	....................................	AGATGTCCTTAAGAAATTAAAGGATGACCC	
    841751	    36	 100.0	    30	....................................	GACTGGTTCGACTGCCTTGAGTCGCTTCGC	
    841685	    36	 100.0	    30	....................................	ACTCATTTTACAAAGAGTTCGAAAGTAACC	
    841619	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        10	    36	 100.0	    30	GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC	                              	       

# Left flank :   AGATGATTATCTATCTTACAAGGAATTTGTTGAGTGTTGCGAAAAGATGGAACTTTTAACAAATCATAGCAACTTGCTTTATATTATTTCGTTTCCTTCAAATGAAGGCTATCTTCATGTTACTAAAGAAGTAATGGAGGAGATTAATATCGTTTCTGATTACGTTGATCATTTTTATTCTTTAGCATTTATGTACGAACGATTTAGCAATCAATACCCAATAAATCAAATACCAGATGAGAAAGAATTTTTAAACTCTTTAAGAAAGATTGCTTCCTATTTATTTAGTGTAGACATTCTTCACATGAGTTTATCCATAGAGGATCAAGTAGTATTAAAGATTTTAAATAATTTGTATCAGTATGAAATGAAAACAAAATTCTCTATTGGATCAATCAATCCTATGTTATTGAAATATTTGGAAGAATAGTATTGACGAGTGGGATTTAAGAATTTATAATATCTTTGAGGGCACAAAAATCAAAATTGACGAATTTGAG
# Right flank :  CAATACTGGAAATTGAGTTCTAACATAGTAAAAACCGCTCAGCAGAGCGGTTTTTGTCTATTCTGTCTATTCTTTCTACAACACCCAAGTTCGAATGGCATGGGCTACGCCAGATTCATCATTAGATTTAGTGATGTATTTGGCGATTTTTTTGAGTTCTGGGTTTCCGTTTTCCATAACAACTGGGTTACCTACGACTTCGAGCATAGCACGGTCATTTTCTTCGTCTCCGATAGCCATGGTTTCATCCTTGCTTAGTCCAAGTTTCTCAGCTAGGTGAGTGATAGCTGAGCCCTTGTCTACATTCTTTTTAAGGAGCTCAAGGTAGAAAGGTGCAGATTTGTTGATGGAGTAGCGCTCGTAAAATTCTGCAGGAATCTTTTCAATAGCGGCATCGAGAATTTCAGGCTCATCGATAAACATACATTTGACGATTTCCTTGTCAGCCATTTCTTCAGGTGTACGGTAGAAAATTGGCATGCTAACAAGGGTTGATTCGT

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         R [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-1.20,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,4.77   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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