Array 1 1415582-1416005 **** Predicted by CRISPRDetect 2.4 *** >NC_013517.1 Sebaldella termitidis ATCC 33386, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1415582 30 100.0 36 .............................. TTCTCTAGCTTTTGCAAATATTTTTTTCATTGTTGC 1415648 30 100.0 36 .............................. TCTTGTCATGGGAGCGTTTCAACTTGATTTTTACAG 1415714 30 100.0 34 .............................. TTTTCTAATTCTTCCGCAACTATTATAGTTTTAT 1415778 30 100.0 36 .............................. ATAGTTCCTTGCAGTATTGCAAATACAAGCAAGATT 1415844 30 100.0 36 .............................. TATAAAACAAAAGTAAAGCAATTAGCTGATCTGTTT 1415910 30 100.0 37 .............................. ATGTACTCTTCCCAGATTAGGCCAAAAGTTTTTTTAT 1415977 29 83.3 0 ........G........T.....-....TA | ========== ====== ====== ====== ============================== ===================================== ================== 7 30 97.6 36 CTATTAATATAACTATCCTAGAATGTAAAT # Left flank : AGGGCCTTTTATTATGCGGATAGAGTGCTTACAATAATATAAATAAACATATTTTTAAAAACTTGCACTTTTTCGGAAATATGATATAATAATATTGAAAACGAGTATAAAGATTTAAAATTTTGTGACAATTAAGCTAGACGTGAGTCTGGCTTTTTTGTTATAATAATTTGTGGTTTCACAAAAACCATAAATCTTTATACTCGGAGGACATCTATGCGTACATTAGCAATAGTTACTATATTATTTATAGTAATTACTAAAGTACTGTATTAACAGTTCCTCAGCCCCTTTGGGGCTTTTTTTAATTCTATAATTTCTGTCGACCTCCATTAAGGTAAAAACTATAGGAGATCGACAACTTTAAGTAGAACAATGCTTTGATAGCATTTTCTCATAAAATGAGACATGATTATGTCAAGGTTTCAGTAAACGAAAAAAATAGGTCGACAGAATAGTGTATTTGAGGTATAATAAATAAAAGGTTTTTAAATAGAGGA # Right flank : ACATAATAAAAAAGCCCTCCAAAGAGGGCCTTTTATTATGGGGATAGAGTGCTTACAATATTCTTCAAAATATCAATAATCTTTATATAATACCTGAAAATTTTAGTTATATTTCTATATAAATTAGATTTTTATTTTCTTATTTCATCTAATAAATTTTTAGCTCCTTCAACTCCATTATCATAAGCCATTTTTGCATATTTTTCAGCAAGTTTATATTTTCCTTGCTCATAGTATAAAACACTTAAATTAATCATGGCATCATAATTATTATTTTCAATAGCCATAAGATAGTATTTTTCAGCAAGTTTGAATTTTTCTTGATCATGATATAAAAGTCCTAAATTATATAAGGCTAATTTATTATCGTATTTAATGGCCATGAGAAAGAGCCTTTCTGCAAGTTCAAATTTCTCTTGTTTTTTATATAGATTTCCTAAATTGTTCATAGCATTAGAGTCACTATGTTCGCTAGCCATAAGATAGTATTTTTCAGCAAG # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTATTAATATAACTATCCTAGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 2 1628664-1628828 **** Predicted by CRISPRDetect 2.4 *** >NC_013517.1 Sebaldella termitidis ATCC 33386, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 1628664 31 100.0 35 ............................... TAAAGGGAAGAAGACTAAATAAAATAGTTAATAGT 1628730 31 100.0 36 ............................... CTGAAATATGATCTGAAGCAGTGCTTGTTCCAGTTA 1628797 31 87.1 0 .......................CAC...G. | C [1628825] ========== ====== ====== ====== =============================== ==================================== ================== 3 31 95.7 36 CTATTAATATAACTATCTTAGAATGTAAATT # Left flank : GCTTCAAAAAATGCACCCCTGATTTTGAAAAAAACCGGATTATATGAATATTTTGATAATATAGCGGAGCCGGGATCTGTACGAGCAAAGCCGTTTCCGGACATTTTTCTGAAAGGTGCTGAACTGTTGGGACTAGAAGTGTCAGAGTGTGTGGGAATAGAAGATTCCTATGCCGGAATTCAGGCTATTAATGATGCGGATATTTTTTCAATAGGGATTGGAGATTTTGAAATTTTATCGGATGCAGATTTGAATCTAAAATCTACGGATTTTCTAACTTTGGAATTAATAAATAATATTGTTTAAAACAATAGATAATCTGTCGATCTCTGGTAAGGATCAAAATGCCGGAGATCGACAATTTTATATTTTATAGGTATTAGAGTTCAGAATTTGATGAACTATGACATGATTATGTCATAATTTCGGCAGACGAAAAAAAGTGATCGACAGAAATGTTTATTTGAGGTATAATAAATAGAGGTTTTTTTCATACAAGA # Right flank : TCTATCAAAAGATTCCATATAGTCACAATATTGGTTAATTACACATAAGATTTGGTTTATATGTTTAATCCTTTTATTTTTTACTTCCTTATTTTCTATATATCTGTTATAATGATTTATAATTGTATAAACAAATTAATTTGGAAAGTGAGGGTAATTATAATGAAAGAAAAGTATAAAAATCTATTTATTCCAATAACTTTAAAGAATGGTGCAGAAGTGCGGAACAGAATAGTAATGGCACCAATGACAACATTTTCCGGAAATTCTGACGGAACGGTTTCCGAACAGGAGCTTAAATATTATAAAAGAAGAGCAAAAGGATTAGGAATGCTCATTACTGCATGTATAGGAGTTTCTCTTGACGGAATAGCATTTCCCGGACAGTTTACAGCATTTGCAGAAAATGCAGATGAGAATTTGAAAAAGCTGTCTGAAATAATCAGAAATGAAGGAACAAAAGCTATATTGCAAATACATCACGGAGGAAGAATGGCTGT # Questionable array : NO Score: 5.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTATTAATATAACTATCTTAGAATGTAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.87%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 3 1738221-1738376 **** Predicted by CRISPRDetect 2.4 *** >NC_013517.1 Sebaldella termitidis ATCC 33386, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ========================================== ================== 1738221 24 100.0 42 ........................ GTAAATGAATAGGAATAGAAAAATAAAAATCTTGTATAGCTT 1738287 24 100.0 42 ........................ GTAAATTAAATCTTTAGATAAAGTATCATAAGATATTTTTTT 1738353 24 95.8 0 .................C...... | ========== ====== ====== ====== ======================== ========================================== ================== 3 24 98.6 42 GTATTAATATAACTATCTTAGAAT # Left flank : AGGGGAAGCGGAAGCTATCCTTGCAGTACAAAGAGCAAATGCCGAGGCTATAAGACTATTGAAAGAGGCAGCACCTACAAGCGAAATATTATCACTGAAAGGAATGGAAACATTCGAAAAAGTAGCAGATGGAAGAGCCACTAAGATAATAATACCAAGCAATTATCAGAATCTTGCCAGTATGATAACTACTTTCGCAGAGTTAAATGAAAAATCTACAGATGGAACAGAGGGAGAATAAATAAAAGAAGGTCCGCCGAAAGGCGGGCTTTTTTAGTATTTTTTAAATAAAGAATTTATGAATAATATCATAAATATTCTGTCGATCCTTGATACAGAATTAAATGCCGGAGATCGACAATGCTTTGTTTTATAGCTGTCTGAATATTATTTTGTTAAAAATAAGACATGATAATGTCATGGTTTGGACAGACGAAAAAAAGTGGTCGACAGAAATGCTTATTTAAGGTATAATAAATAAAAGGTTTTTGATATGTAAG # Right flank : TAAAATCCAGTTTTAAAAGAAAAATATAAATAAAAATGCACCATTTTCATTTTAGAGAAAACAGTGCATTTTTTATATTTAAAATACTAATATTTCAGGTTTTATGATAAGCATAAGTCCGAGAATAACCATAAGAATTCCGCCGAACAGATTCATGAGCTTTGAATATTTACCAGTAGAGGCTATCTTGTTTATACTGAATAAAGCCAGTGCAAATACTACAAAATCATCAATCATATACCCTATAATATAAATAAGATTATAAACCTGTCTGCTGAGAAAAGAAACTGTATTCATCTCGAGAATCTTGGTATAAGTCTGTGGTATACCAATAGAACAGGCAAATTCTATTACATTTACCGACAGGGCAAGAGTAATGATACCTAAACCTGTAAGTATAGTGAACGGCTTATGAGCCAGATCCTGAATTTTTCCGGAAATTTTTGCCTTCTTCTCAAAATCGCCTACTTCACAGGCTATTTCATTACGGTTCTTAATAT # Questionable array : NO Score: 5.29 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATATAACTATCTTAGAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 4 2840156-2840339 **** Predicted by CRISPRDetect 2.4 *** >NC_013517.1 Sebaldella termitidis ATCC 33386, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================== ============================================= ================== 2840156 22 100.0 44 ...................... AAAACTCAATCAAAATAGGGTGTCAAAAGTACACTCATTTACAT 2840222 22 100.0 45 ...................... CTGTTAAATCCATGTTATAATATATTATCTTTTTGAAATTTACAT 2840289 22 100.0 7 ...................... TCCAGCC Deletion [2840318] 2840318 22 68.2 0 .......ACC..T....T..TA | ========== ====== ====== ====== ====================== ============================================= ================== 4 22 92.0 32 TCTAAGATAGTTATATTAATAG # Left flank : TTATTAACAGTACTACTCCTTTATTTCTTGTTTTCTTTCCTGACAGTAATACTATCATTAAGATTATCCATATAATACCGTTATCTCCCAATGAAGTAAAAAATACCATTATCTTGTCCAGCAATGGATTTTGAATTAATTTTACAGCATTTACTGCTGTTTGATCCATAATATTTAACATCCTTTTACTCCTGCCTGTTTATTATACTATCATTATATAATCCAATAAATAGACCTGACTGTGATATAACTGAAAGTTTTATGAAAATTGCAGGTAGAGCGGATATTTTATTTTATTTTTATATTTGAACATATGTATAAAAAAAGCCTTCCATAAATTTTCAGGAAAGCTGTTTTAAAATCTGAAGTGATTTTATTTTGTTAGAATTTTTTTAAATAGTTATTTTTTCAATATTTAAGTTATGTTTTCAAATATATTTTTGATAAATTCACATTGCTATTTATGCTTTTAGTATGAAATAACAACTATTATTTTTTGC # Right flank : ATACCTTGATTATCAGTTTTTGTCGATCTCTTTTTTTCGTCTATTCCAATCTTGACAAAAGTATGTCATATTTAGGGTGAAATATCAATCAAAATACTGATTATTTTAATGTTGTCGATCTATAGTACTTTTACCCCTATCAGGGGTCGACAGAAAATATCTTTTTAAATATATCTCATAAATCATAAATCAAATAATTTTTTATCATACAAATAAAAAAATAACCAAGAGTAAAATAATAGCCTTAGTTTTAATAAATTTATCTCCGTAATTGTTTTATAAAATCGTTATATTCATTTAATGCTTCTATTATTTCAGATTCATAAAAACCTTTTCTCAAATAAATAAATAATATCTCGACATCTGACTTATACAGGCTCTTATAAATGTCAATTTCCGGAAAGTAGATGTTCTGCCTGTATTGTGCATACATTCTCCTTAAAGCCAGAGGATTCCCTTCTTTCAGTTTCCCCAGCAATGTTTTACTATTACTTGTGTAT # Questionable array : NO Score: 3.71 # Score Detail : 1:0, 2:3, 3:0, 4:0.60, 5:0, 6:-0.25, 7:-1.04, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCTAAGATAGTTATATTAATAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:81.82%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //