Array 1 33843-33214 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAHCXQ010000011.1 Campylobacter jejuni strain TTU_620 NODE_11_length_49902_cov_64.701729, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     33842	    36	  97.2	    30	T...................................	GCACCTGTTTTTGATTGAACAAAACAACCA	
     33776	    36	 100.0	    30	....................................	GTATTTTGATACTCTGCTTCTTGGTCTTGA	
     33710	    36	 100.0	    30	....................................	TGCACTGAAATAAATGAGTTTATAGCAAAT	
     33644	    36	 100.0	    30	....................................	AGAAAAATCAAATTGTGTAACAGGGGTGTT	
     33578	    36	  97.2	    30	.........T..........................	TTTGCGACTTTCAATCTCTTTAATTGTTTG	
     33512	    36	 100.0	    30	....................................	AAATTACCTTTTGAATATATAAAAAAAGCA	
     33446	    36	 100.0	    29	....................................	GCATTGTTTATAATACTATCACTTGCTAA 	
     33381	    36	 100.0	    30	....................................	AAAAGCGATAATCTTGCTTTAGGTAGTTTA	
     33315	    36	 100.0	    30	....................................	TTTTAGAGAGAGAATACAGGGAATTGGAGA	
     33249	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        10	    36	  99.4	    30	GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	                              	       

# Left flank :   AGATATAAAACCAGGAAGACATATCAAAATAGCTAAGGCTAATGAAAAATTCATTATCGCCTTACCCGGTTTTCCTTACTCGGCTATGGTAATGTTTAATCTTTATGCAAGAGAAATTTTAAATTCTTGGTTGCTTCAGCCTAAAGATTACATTTGTAAAGCCTTTTTACAAGGAAACTACAAGAAAAAAACGCCTTATTTGGAATTTGTTGCTTGTAATATAGAATTTAAAAACGGACGCATTTTAGCCAATCTTGAAGGTAAGAAAGAAGGCTCTAGTGCGATTATAAACAATCTTAACAATAAAGCTGCCCTTATGGTAGTACCAAAAGAATGTGAAATTTTAGAAAATGAAAGTTTAGTAGATATTATCTTTATGCCTTAAAATTATTTAAATAATTTTATTTCGATTTTAATCAACCCTAAATTTCAATAAGTTTCAAATTTGCACCTCCTTTTAGTGAAGTAATTAGCCCTAGCAGAGTTTCAATCCACTAGGG
# Right flank :  AGATATTTACCAGATAATGAAAATTTCGGGGTTTTTTGATGAAAAATAGCAAAAATTATGCTATAATCTCATAAGAAATTTAAAAAGGGACTAAAATAAAGAGTTTGCGGGACTCTGCGGGGTTACAATCCCCTAAAACCGCTCTTAAAATTCAAATAAATTTTGCTGATGATATTTTTCTTGTTTTTTGTTTATTTGAATTTCTTCATTATTTGAATTTTTATATTTAAATTCTCCATGACTATCTATATCAAAAAGCGTTAAATTGGTTTCGTTATTAACTTTTTCGTTAAAAACTATGCCACCAAGCAAAAGCTCCATTTTATCAAACTGCTTTTCAGTGATGATTAAAGCTCTTACATTTCCATAAGGTGGCAAAATCTTTTTTACATTTTCAATAGAACTTTTTGCAGAACTTAAACCCTTGCAAATACGCATATAAACGCTAAATTGCAACATAAAATAACCTAATTTTATAAGATTGTTTCTAAATTTACTTG

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:77.78%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [75.0-58.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.68,4.5   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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