Array 1 2569696-2569085 **** Predicted by CRISPRDetect 2.4 *** >NZ_VCNB01000001.1 Streptomyces sp. DASNCL29 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 2569695 37 100.0 36 ..................................... AGCTACTACCACGCGCACCACCCGACCGGGCGTGAC 2569622 37 100.0 36 ..................................... CACCGGCGCGCCGGTGAGGATGGCGTGCACGTGGTC 2569549 37 97.3 35 ................A.................... TACCCCGACGGCGCCCTCTACCAGGTCGTGCCCGA 2569477 37 100.0 35 ..................................... TCCCACGCCTCCAGGTCCTCGGCCTTGGGCTCGAA 2569405 37 97.3 35 ...A................................. TTACGGCTGCGCGAGGCGTGTGGAGAGACGCTGCG 2569333 37 94.6 37 ....................C.G.............. GAGGTCTCGGCGCTGATCACGGACCCGAAAAATGCGT 2569259 37 89.2 26 ................AT..........A...A.... CCCCGCAGCACCGTCCGCCATCCCTG Deletion [2569197] 2569196 37 73.0 37 CC..GT....AGT...A........C..........T AGTAAGACCGTCTGGGTGCCGCAACCCGACTCCGGTA G,G [2569179,2569182] 2569120 36 94.6 0 .............-..........T............ | ========== ====== ====== ====== ===================================== ===================================== ================== 9 37 94.0 35 GTGGCGGTCGCCCTCCGGGGTGACCGTGGATCGCAAC # Left flank : CAGGCCCGCATCCTTGCCCGCCACCTACGCGGCGAACTCCCCGGCTACCTCCCCTGGACAGCCGCCTGATGGACATCCTACTCACCTACGACGTCGACACCACCAGCCCCGAAGGCCGCCGTCGACTACGCCGCGTTGCCAAACTCTGCGAAGGCCACGGCCTGCGCGTCCAAAAATCCGTCTTCGAAATCGTCACCGACTACCAAACCCTCCTCCAACTCCTCGACCGCCTCAACGACATCATCGACATCGACACCGACAGCATCCGCCTCTACCGCCTCCCCCGAGAAGGCTTCGACGACGTCCAAACCCTAGGCATCGCCCAAGTGCAGCCGCACCGCGAAGATCTCGTCCTGTGATCGCCCTCCCCAGCTTCGGAACCCCAAGTACACGCACGCCACGCAGGTCGCACCGAAGCAAAACACCCGATTCCAACCGTCTTGTCCAGCCCCAGCGTCCCCATGAAGACTCGACCTACAGTGTTCTCGCTGATCAACTGG # Right flank : GTCGTGCTGGACGTCAACCAGGAAGACCGTCGGCCACAACCGCACAGTGTACGCACTCTCACGGCCGTCGATGTTGAGGCTGGCGGCCCGCAGACCAGGGCGGCGTGCGCCGTCAGGGGGACAGGTCGACCGCCGAACCCCTCCGGCGCTGTCGATCCCGCTTTACTCGAGGGTCGACTCACCCCGGCCAGCAGGCTGGGCCGTTTCCAGTACGGGCTGTTTCCCCGGCGCTCAGCTCGGGCTGCGGCAGCATGCCATCGACCCAAACATTACACAGCGTGGCCGACTGTCACACACCGACCCGACCTCGCCGCCCACAGCCAGAGCAGCGGCGCAGATCCCCAGGCAGCCACCTCCGATGACCTGCGTCCCATCAGCGTCCCGAATTCGGCCTCCCCCCGCTCGCACAGCCCACCTACGGCGGCTTGCCCCGGCAGAGAACCGAGAACTCCGCCCAGGTCAGAGCGGCGCCAACCAACCCTGACGGCCACGGCATTGAA # Questionable array : NO Score: 5.52 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:-0.02, 8:1, 9:0.59, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGGTCGCCCTCCGGGGTGACCGTGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGCGGTCGCCCTCCGGGGTGGCCGAGGATCGCAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.40,-17.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [18-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 2578452-2580615 **** Predicted by CRISPRDetect 2.4 *** >NZ_VCNB01000001.1 Streptomyces sp. DASNCL29 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================================== ================== 2578452 37 100.0 36 ..................................... TACGCGGTGACGGCGGTCAATGCCAAGGAGGGGGAC 2578525 37 100.0 37 ..................................... GATCTCCAGCTCCCGGCAGGTGCAGGAGATGCCGGGG 2578599 37 100.0 37 ..................................... GATCCTCACGACGGATGTAGAGCCACCAGTACGGCGG 2578673 37 94.6 35 ............C...............A........ GGCAGGCGCGGGTAGCGCAGCATGTTGCCCGCCTC CC [2578687] 2578747 37 97.3 36 ............C........................ CCCTGCACCGACGGCTGCGCGATCACCGGCCTCGAC 2578820 37 94.6 37 ............C..T..................... ATCGAGCTGGCGTCCGCGATCGACCCGCGCATCCCGT 2578894 37 91.9 36 ............C...C..T................. TTCCACCCCCTCGCCGCCGGCGGCTGCGTCCTGGAC 2578967 36 97.3 36 ............-........................ GACTTGGCCGCGGCGATGAGCTGCGAGAGGTCGACC 2579039 37 91.9 35 ..........T.CT....................... GGCCCGCACCTCGCCGTCGCCGGGGAGGGCTGGGT 2579111 37 91.9 35 ...........TC....T................... GAAGTCGGCTGGGGCGCGCCAACTGCCGATGAGGT 2579183 37 91.9 35 ............C..T........G............ CCAGGTCTACAGCTACTTTGCCAACGGCGGTCAGC 2579255 37 97.3 35 ............C........................ TGCGCGACCGGGTTGCCCTTGAGGTCCGTGGCGTT 2579327 37 97.3 37 .......................T............. CAGGAGCCTTTCGGCCCCGAGTACGTACGCCCCACCC 2579401 37 83.8 35 .........G..CT...T....G.....A........ TACATCCGTGACCGGCACGTCGCGGAGGATCTGAG 2579474 37 78.4 37 A........GTTCT..A..T................. CATGACAAGCCCGTGGACTGGCGCATCGCCATCGCGA 2579548 37 81.1 34 C.....C..G..CTC.....T................ CTCCAGAAACCCCCGGGATCAACCGGGTCGATCA 2579620 37 94.6 36 ............C..T..................... GCGCGGTCCGTCCGGGCCGGTATCGCGGCCATCGCG 2579693 37 97.3 36 ............C........................ TCGTAGGGCCTCACGGCTGGCCGGGAGAGAGCCCGG 2579766 37 100.0 36 ..................................... ACTCCGTGGGGTCTGACGTCCCCGATTCGGACGACG 2579839 37 91.9 37 ............C..T...................G. TACGAAATGATGCGCTCCCTGCCCGGCGTGACCGAGG 2579913 37 94.6 37 ............C...............A........ ATCGAGCTGTCGTCCGCGATCGACCCGAGCATCCCGT 2579987 37 81.1 36 .....A...G..C...C..T.......C........T GCCCGCACCATGGACACCCCGGCGATCTACCGGCTG 2580060 37 86.5 37 .........G..C...C.........T......T... CTCGGCACGAGTGCCGGGCTCGTCGGGATGGCCCTGG 2580134 37 81.1 27 .C........T.C...T...T.GT............. GGTTTCCGGCGCGGTGCGCCGCGTCTC Deletion [2580198] 2580198 37 83.8 51 .........G..CTG....AT................ TTCGAACAGGTCAGACGTTCCTGGCCAGCGGGAAGTGGCGGTCGGGCACTT 2580287 37 81.1 37 .......G.GT..T.A...A..C.............. CACGAGCCTTTCGGCCCCGAGTACGTACACCCCACCC G [2580306] 2580362 37 81.1 36 .........G.TCT...T....G.....A........ TACATCCGTGACCGGCACGTCGTGGAGGATCTGAGC 2580435 37 78.4 35 A........GTTCT..A..T................. AGCGAGATCTGCGGGTCCCGGGCCTCATCCACCGT 2580507 37 91.9 35 ..........T.C........A............... GAGCAGGCCCAGCAGCAGGCCGCGCTGGACCAGAT 2580579 37 89.2 0 .........G..CT.................T..... | ========== ====== ====== ====== ===================================== =================================================== ================== 30 37 90.7 36 GTGGCGGTCACCTCTCGGGGCGACCGAGGATCGCAAC # Left flank : CCGACCCTGCCGCCACCCCGGCGCTCCACCTCAAGAAGTCTCGACTGCCAGGAACAAGATCCCTTCCCAACATCATGGATCAGTGCCAGGAACCCCGCGAGCTCACCCGCCCCGAAGAGGTCGCCGAACCGCCGAGCCAACGCGGCCGAACCCCGCAAGTGGTCTTCCAGAGAATGCCGGTGCCCCGAAACGGCACTTCGGCTGTGCGCGTACAGCGGTGCGACAACGGACATAAACGAATCCCTCCTCGGAACCGCTGATCTCCACTCAGCAATCGAGGATGGGAACTTACACAACGCCACTGACAAGCCGCGTAGGTGGCAGTGCGCAGGCTGTGGTTACGCTGTCATCGTCCACACCGAAGGCAGTGCTTCGGAACCTCTAGTGCACGCGCGACACGCGGATCGCTCCGAAGGAAAATGCCTGACTGATGCGCTTATGCTCCTCTCACCTCCGCTTCGCTCAGAGCACAGATAGTCTGTCTGACCTGATCAACCAGC # Right flank : CACGTCGGTGCAGGAGGAACGGCCTATTCACGGTCCTAAGAGTCTACTCATCAGGGTAGGAATCCATCGCCCCTGCTGTCAGCAGAGGGTCTGTGCGGACATGGCGCGGTGGCAATGAGGGGGACTCTGCGGATGGGGCACGACGTGGCTGCGAGCCGCTTGGAAATGATCACTGACTGGGCAGAAGGATTACGGGTCTTGCATGTAGCGCATAACATCGCAGCGGAGCGTTTTGAGCGTTGGGATCGTGTGACTGCCATCTCGACCGCTGCACTGTCCACCGTCGTAGGCACGGCGATCTTCGCCACGCTGGCGGAGTCGTCACGAACGGCTGTCCGCATCATCACCGGCATTCTCAGCCTCGCCGCAGCGGCACTCAGCACCGCGCAGCTGATCTGGAACTACCCGCAACTGGCTGCCCAGCATCGGGCAGCCGCCGTTCGCTACGCCACGGTACGACGCCAGCTCGACATCATGCTGGCTGACAGCGACCGCCTCAC # Questionable array : NO Score: 4.97 # Score Detail : 1:0, 2:3, 3:0, 4:0.54, 5:0, 6:0.25, 7:-0.00, 8:1, 9:0.18, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGGTCACCTCTCGGGGCGACCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGCGGTCACCTCTCGGGGCGACCGAGGATCGCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [6-32] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //