Array 1 2942779-2943466 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849643.1 Acinetobacter soli NIPH 2899 acLsA-supercont1.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2942779 28 100.0 32 ............................ TTTAACGTCAACAACCATCCCATCCCATGCAT 2942839 28 100.0 32 ............................ TACAGCTTTAAAAGCAACACCAAGGGCATCGG 2942899 28 100.0 32 ............................ ATTAATAATTGTTGAAGAAGTATCTGCACCAA 2942959 28 96.4 32 ...............A............ ATCACCAAGCAAGGCCCTGTAAATGTTGTTGA 2943019 28 100.0 32 ............................ ACGAATACAACGACTTCACTGTCAGTGAAGAT 2943079 28 100.0 32 ............................ AGAGCAAAATCCTGCTGCCAACATGGGTGCGG 2943139 28 100.0 31 ............................ TCACCAAATCCCGAGCATAAAGAAACCAGAC 2943198 28 100.0 32 ............................ TGAGCTGCTCATGGGCCTACGCTCATCTGAGG 2943258 28 100.0 32 ............................ GACGTGTGTCGAGCTTCGTGGGCCGTTTGTGA 2943318 28 100.0 33 ............................ GCTATCAAAGGCCAAAGCTACAGGCCGATTGGT 2943379 28 100.0 32 ............................ ATTTTCCAATTTTAAACTTCAATAAAATGATC 2943439 28 89.3 0 .......G.....T..........A... | ========== ====== ====== ====== ============================ ================================= ================== 12 28 98.8 32 CTTCACTACCGCACAGGTAGCTTAGAAA # Left flank : CCGATATCGGCAGGTGTAAATGCGATTTGACGTTGCAAATTACTGGTTTCAATGGTGTCGGCATCAATCAGCGTGATTTTGCCTACGCCTGCTCGAGCCAGTAGCTCTGCTGTTGTACAACCGATTCCACCCGCGCCTACTATCAAAACATTGGCGAACTTTAGTTTTTCTTGAGCATCTAAATCCCATCCATCGAGTAAAATTTGTCTGCTATATAAATGCATTTCGGCATCATTTAGCTCTAAATCCAGATTGTCCTGATTGTTCACTCGTGATTATCCCAATTTATCAATACCAAATTCATCGCCATGATTATAAAGACAAGCTTGTGTTGTGAGATGTTTTATTTTGACAAAAGTGAACTTTTACTCCAATATTTTACTTACTCTTTAACAGTTAAATAAAATCAAAGACTTAGTTAGAGCTAAAATAAAATAGGTCTTTTTATTTTACTTGCTTTAGTGTATTGTTTTTAATATATATTTTTATATTTTATTACT # Right flank : AGTTTGACGACTCAAAATCATCAATATTCAGGTAGGTATTTGATTAAAAATGCATATACTTAAATCAACAACAATAGTTTAGATTTTGGCACTTTTTTCTTATGCTCAAACAGCCCTTCCTCAAAAAGATAATTCAATATGCGCCAGTCATTTTATTTTGCATAGCATTATTTATCATACATAAAGAACTTGAAACCCATGAGTTTTCAGGCTTACTTAAACACTGGAACAATATTCCTTGGTCAATCGCGCTAATGGCATGTGGTTTGACATTAGCCAGCTATCTATTTCTTACACTTTATGATGTTTTGGCTTTAAGGTCATTAGGATATCGCAACATCAAATATAGATATATTCTGTTCACTTCGTTTGTCAGCTTTGCTATCAGTAACAACACTGGGCATGCATGGGCCTCTGGGGGTTCAATCCGCTATCGTTTTTATCAAAAAATGGGCGTTCAGGGCTGGGATATTGCAAAAATCTCGGCTTTTTTAAGTCTG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTACCGCACAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched CTTCACTACCGCACAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [86.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 3049175-3050975 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849643.1 Acinetobacter soli NIPH 2899 acLsA-supercont1.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3049175 28 100.0 32 ............................ ATACCGAATGCACACCAGTCATCACCGATTAC 3049235 28 100.0 32 ............................ GCTTGTAGATTGCCTTGATTGCTTAACTGGCC 3049295 28 100.0 32 ............................ GAACATGAGGACTTTCAGCTCGTTGTGTACAG 3049355 28 100.0 32 ............................ GGCACCAAGTGTGGGCGTGGGGGAAGATTCAT 3049415 28 100.0 32 ............................ GGTTGCTGAAAGGTATCTAAAACACTCACTGC 3049475 28 100.0 32 ............................ TCATATGAAGTTACTTTTGATGATCGTTTTAC 3049535 28 100.0 32 ............................ TGTAATGATTTAAGCAACTCCTCCACATCAAG 3049595 28 100.0 32 ............................ CATCGTATTCAGTCTTTTTTCGTATTGACGCC 3049655 28 100.0 32 ............................ GAGAACTTAATTTATACGATTGGTCACAATAT 3049715 28 100.0 32 ............................ AGAAATGGACCATGAAGCAAGCCTATAAGAGT 3049775 28 100.0 17 ............................ TTAAAANNNNNNNNNNT Deletion [3049820] 3049820 28 100.0 32 ............................ TTAAAAGACTAAATGATCCCAAATATGAAGTT 3049880 28 100.0 32 ............................ AGAAATCTGATTATTTGTCGTAGTATTTGATT 3049940 28 100.0 32 ............................ TCTGCCTGAATTGCATATAAGTCAGAACTAAC 3050000 28 96.4 32 ...A........................ AAAGCGGTAAAACGACAACAGGAAAACTCTTA 3050060 28 96.4 32 ...A........................ CTGTTGACCAGATGTTGAAATTCCCACAGCAC 3050120 28 96.4 32 ...A........................ ATGAAAAAATTAATCCTATTATTTCTCTTTCT 3050180 28 96.4 32 ...A........................ GTCGGAACCTGATTCGGATAATGATATGTTAG 3050240 28 100.0 32 ............................ TCAACATTATCTACCCAAGTGGCAAAGGGTAT 3050300 28 100.0 32 ............................ AAGGGCATTCACTGCTTCTTGTGGTGTTAGAG 3050360 28 100.0 32 ............................ TTAATGTCCAAAATTGAGGTGATTGACGACCT 3050420 28 100.0 32 ............................ ATGCCGTACACAGTTTTAATTTTGCATGTGTC 3050480 28 100.0 32 ............................ TTCAGGCACTGTGTACTTAATACGCGCATCAT 3050540 28 100.0 20 ............................ ATGACATNNNNNNNNNNCAT Deletion [3050588] 3050588 28 100.0 32 ............................ ATGACATAACTGTCATCTGCTCCTAGTCTTCT 3050648 28 100.0 32 ............................ TTCATGCGCACAGTTTCACACCACGCGCCGAA 3050708 28 100.0 32 ............................ TCCAGATGGAATTGCTTCAAGGTTTATCGATT 3050768 28 96.4 32 ...T........................ TAAAGCCTACGTTGTTCAATGTAGGCTTTTTT 3050828 28 100.0 32 ............................ AAGCCAGCATCCAGCATCGAGAGCGATCTGAT 3050888 28 92.9 32 ...T........G............... TAAGCGAATCACAGGAAATGGCAATTCTTGTT 3050948 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 31 28 99.2 31 GTTCGTCATCGCATAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAGCACTGTATAAAGAATTGGCCAAAGGATTTAATATTGATTTTAAACGAGATGAAGGCAAAAACTCACACGATACTCTTACCGATATCGCGAATAACTACTTAGATCACGGAAATTATATTGCCTATGGCTATGCGGCAGTTGCTTTAAATGGTATGGGAATTAGTTTTGCATTACCTATCTTGCATGGTAAAAAACGCCGCGGAGGTTTAGTATTTGATCTTGCCGACTTAGTGAAAGATGCTTTTGTGATGCCAACTGCTTTTATATGCGCATCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAACTTATAGAAATATGCCAAGACCAAGATCTTCTAGATTACATGTTTAGCTTCATTACAGACATTTGTAGTAAAATCAAATAAAATCATACAATTAAGTCAAGTGGTTCATAACGAAGTATTTTTACTCATTAAAAGCTTATATAATTGATATTAAGGGTTTTGTTTTGACTTAACTCTA # Right flank : AGGCTAAAAATACTCCTCCTCACATCGTATTTTCCTGCACCAAACTATTCATATAAGCCACCGCTGCTGTACGGTTTTCCACACAGAGTTTTTCAAAAATATGTTCAAGATGTTTATTTACAGTTCTTGGGCTGAGCTCTAATATCTCGGCAATATCTTTATTGGTTTTACCCAGTGCCAGCCAATGCGAAACTTCCGCCTCTCGCTGGGTCAGTTGCGGGCAATATTTTAAAATCTCCTCAACGCCCAAAGCCGGAGCAGACATTTTAATTTGCACCAGATAAGTGGCGTGCCCCACGGGTTGATCGTGCCATGGTGTAAGTAAAATAAGTTGCAGTTGATGTGATGCACTAGAATAGGTGCAACTCATTTTCTTTTTATTGTCTTTATCGCGTTTAATTTCGGCAAACCACTGTGTTAAACCAGTTTCAAAGCGTTCACGATCTTGCAAATACTGGTTCAGCAAAATATTGGCTTTCTCTGTGGTCCATGCAATTTTC # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: F [matched GTTCGTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //