Array 1 96402-95358 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDYZ01000005.1 Corynebacterium glyciniphilum AJ 3170 strain DE0385 NODE_5_length_221293_cov_56.742029, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================================================================================================================================================================= ================== 96401 29 79.3 189 .G....A..C....T.....A.......A TGCACACTGCTTATGTAGCGCGATGTGCTCTGACTCTTCCTGCGCCAGCAGGGGTTCAAGTCATTTGCAACGTTCCGCTTACGGGGCTCATCTGTGGATTTCCAAAGAAACCTGCAGCGCCCACTGGAGGCCAGAACCAAGTCGTATCTAAAATGGACATCGGCTCCGCAAACCTGCAGTACATCGAGT G,T [96376,96386] 96181 29 100.0 32 ............................. CTTCGCGTCCTGAGAACTACGGGTCTGCTCTA 96120 29 96.6 32 ............................T CTGGGGTACGGCGTCATCGAGTGGATGGAACA 96059 29 100.0 32 ............................. ACTCCACCGGATGATCTGCGACGTGCAGCTAC 95998 29 100.0 32 ............................. AGCATCCACGCCCGCGAGTGATGCTCTTCGTC 95937 29 100.0 32 ............................. CTCCGATACGACACCAGGGCAGGCAACATTGC 95876 29 100.0 32 ............................. ACGACGCAGTGGCAGCCAGCAATGGCGGGGAT 95815 29 96.6 32 ............................G AACCCGATGACCTGACGGAGTTGGCGGCTACG 95754 29 100.0 32 ............................. TCCTCGTCGTCTACTTCCGGTTGGGGGAAGTA 95693 29 96.6 32 ............................G ATCTCCGGCGACTTACCGCCCACGGTGACGGT 95632 29 100.0 32 ............................. TGCGACTCATCGATGAGCTTGCGCCACGTCAG 95571 29 96.6 32 ............................G GTGAGCACCTTCTTAGCCTCGTCGTTTGTCAC 95510 29 93.1 33 ............T...............G ACCCCCTGGCCGAGTCCGGCGAGGGGGTGTGGA 95448 29 100.0 33 ............................. ACCGTGCTCAACCGGGTCAGGAAGTTCGAGGTG 95386 29 86.2 0 C....................T.A.A... | ========== ====== ====== ====== ============================= ============================================================================================================================================================================================= ================== 15 29 96.3 43 GTGCTCCCCGCGCCAGCGGGGATGAGCCC # Left flank : AACGTGGCATTCCGATGCTCGCGCTGTGCGTGTCGATGCTCGGTGGGCTCGCCTCCCTGCTGTCCAGCGTGGTGGCCCCGGGAAGCCTCTTCCTGGCACTGGTGTCGGTCGCCGGATTCGCGGTGGTGGCGGTGTGGATCGCCATCGCCGCATCCCAGATCGCCTTCCGGCGGCGCTTCACCGCGGCAGAGGGACGGGTCGAAGACCTGGCCTACCATTCACCTCTGTTTCCCTGGGTGCCTGGAGCCGCACTGGCCCTGTTGGTCGTCTCCCTGGTGGGAGTGGGGTTCGACCCGTCGCAGCGCGCATCCCTGTATTTCGGTGTGCCGTTCACAGTGGCGTGCCTGGCGTACTACCGGTTGCGGCACGGTCCGGGAGTGTTTCGGCCGGGAACGTGACGGTAACGAACGGGCTTGTGCTGACCGGTTGTGGCACTGCGGCTCATATCCCCGCTGGCGCGGGACGCTCATTCCACCAAGTGTTCCTGTTATCGGTGACGC # Right flank : AAGCACCAACTCAATCGTCCAGAACAGCCCAGCACGATGCACCGCTCCCACCACCAGATGCCCTGGAAGACACACAGTTTGCACTCGGCCTTGCGCTACGGACGATGCGATGAAAGCGGCGGGACGCTGTCCAGCTAGGATGGCGAAGTTCCGGCCTGCCACCCGTCATTCTCAGGGGGCAGGCTTTCTGACGTCGAACGACTAGTCGAACATTCCAGGAGGTCATGTGGAGTACACCCCGTTCACGCTGCTGACAGATGTCGGTTGGATATCGCTGCTACTGGTCATAGGCAATCTACTGCGCCGGCATGTGCCGGTCTTCCGGTCACTTCTGCTGCCCAGTCCCATCACCGCCGGCCTGCTGGGCCTCCTGTTCGGTCCACAGGTCCTCGGTCTCATCGGGCTGTCGGACGCCATGGGGGACTACACCACGTTGCTGATCGCGCTCGTCTTCGCCGCCATGCCCTACTCGATGCGTTTCGACCGGTCGGTGCGGCGTG # Questionable array : NO Score: 4.91 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:-1.07, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCCAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCCAGCGGGGATGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [5-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //