Array 1 50368-52190 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHDAJ010000001.1 Streptococcus lutetiensis strain PA11380C3 KS15_NODE_1_length_232601_cov_843.613_ID_375, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 50368 36 100.0 30 .................................... AGCTGACGACTGAAAACTGGAATCAGATGG 50434 36 100.0 31 .................................... TATTCGTCATCGTCATCTTTTTTGCTAAAGA 50501 36 100.0 30 .................................... CTACTCCTTTAATATGATATAATATTAATG 50567 36 100.0 30 .................................... AAGAGGCATATAAAGACCGTTTAAAATTAG 50633 36 100.0 30 .................................... TCAAAATTATCTAATTATCCGTGGATAACG 50699 36 100.0 30 .................................... ATGCTGCATTCGAACAAAGTGAAAACGATA 50765 36 100.0 30 .................................... CGTGATTGCTGAAGTGTCAAAAGGAAAATA 50831 36 100.0 30 .................................... TGACATCACTTGCTGACGAAATCATGGTAA 50897 36 100.0 30 .................................... CAATTACATTATACTTCTTATTGAACATCC 50963 36 100.0 30 .................................... ATAGGAAACTTCTCTGTACCAACAGTTGCT 51029 36 100.0 30 .................................... GTAAGAAAATCACTGATATCAATGTTGCTG 51095 36 100.0 30 .................................... AACTTCCGTATCCGCCTGCATTTAAACCTA 51161 36 100.0 30 .................................... AAATGTATTCGCTAACTTTGCCACCAAATT 51227 36 100.0 30 .................................... AGATATATTGAAAGTCAAATGAATCAATTA 51293 36 100.0 30 .................................... ATTTGGCAGCAATGCTGGAAAGTGTGTCAC 51359 36 100.0 30 .................................... ATTTTCTATTTTTTATGCGTGTTTCAAGTA 51425 36 100.0 30 .................................... CTGTTGCCAAAAAGAAAGGGAAAATAATGA 51491 36 100.0 30 .................................... AATTATCCATTTTCTAAAAATCAATCTTTT 51557 36 100.0 30 .................................... ACAATACTGACAAAGATAATGATCACGTTT 51623 36 100.0 30 .................................... TAAAATGTTACAAGCAAGTAAGTACTGCAT 51689 36 100.0 30 .................................... GCAATCCCCGTGCAGAGTCACATATACGCT 51755 36 100.0 30 .................................... CATAATCCATCCAGTTATCACCTGGTGTAG 51821 36 100.0 30 .................................... GATTGCTAATGCCACCGCTACTTTGATACT 51887 36 100.0 30 .................................... CCGAAATATTTGTGAAATGTTCTGCAAATT 51953 36 100.0 29 .................................... GATTACTATACCAGTAATTGGTGGGCAAG 52018 36 100.0 30 .................................... AAAGCGAAGCCAAGAACTACTGGATTGGCA 52084 36 100.0 29 .................................... CTTAATCTAATAAACTATAAAATTATCTA 52149 36 88.9 0 ....................T...AAA......... | A,C,TAA,T [52171,52178,52181,52185] ========== ====== ====== ====== ==================================== =============================== ================== 28 36 99.6 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : TTTCACAAAGAAGAAGGTGGAAGTTTTTGGGTAGAATTTCCAGGATTCGGTGGTGAAACTGAGGGTAAAGATATCGAGGAAGCTATGAAGAATGCACGTGAAATGCTTGAGAGTTCGTTAGCTGCGTATTTAGATGAAGGACTTGCTCTTCCAAAAGTTATTGATATGAGTGAGTTAACCGTTGATGATGGCTTCATTACTCTGATTCAAGCTGATCCTTCACTGTATTTAAAAAAGACAAAAGCTATTCGTAAAAATGTTACGGTAGCAGAATGGTTAGTCAGATTAGCTGACTGTGAGCAGGTAAACTATTCTGAGGTTTTAACAAAAGATTTGGAGAAAAAAGTTGCAACTATAAGTTTTAAGATTGTTCAGGAACGTTGAAAAATCAAGGTTTTTAAGGTATAATAAAACTAACATTATGGAGCTGTTCGAGACTGAAGTCTGGCTGAGACAAATGGCGCGATTACGAGATTTCGTGAGAAAAATTGGTCCACGAG # Right flank : CTGTAGTAAAAATTACTTTCAATGTTTTTCAAAAGTTTTCTTTTATGGTAAAATTGAAAGTGAATTTATTTTAGTTAGATAGGTTGGATTGTTTACATGGAAAAAACTTTCTTTATGATTAAACCAGATGGCGTGAAACGCGGACTTGTTAGTGAAGTACTTAAACGTATTGAACGTCGTGGTTTCAAAATTGAAAAATTAGAAATGCGTATGGCAACTCCTGAGTTGTTAGAAAAACACTATGAAGACTTGGTTGATCGTCCATTCTTCCCACTAATCGTTGACTTTATGACAAGTGGTCCAGTGATTGCTGGTGTTATGTCAGGAGAAGAAGTAATTACTTCTTGGCGTACAATGATGGGTGCAACAAACCCTAAAGAAGCTCTTCCAGGAACAATCCGTGGTGATTTTGCTCAAGCGCCAGCTGAAGGTGCTGCAACATTTAACATCGTTCACGGTTCAGATTCACCAGAATCAGTAGAACGCGAAATTGCCCTTTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //