Array 1 2286715-2286356 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014174.1 Clostridium botulinum strain B609 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2286714 30 100.0 36 .............................. TGATGAAAAATAATTATGCACCTGGATATTTAAGAA 2286648 30 100.0 35 .............................. AAATTTATGGATCTAATACTCATAAAGATGATTTT 2286583 30 100.0 37 .............................. TTTATTAGTGCCATTCCCGCTGGAGAGTATTGTGTCC 2286516 30 100.0 36 .............................. AATGTTAAAACAGTTACACCAGCTACAAGACCAAAG 2286450 30 86.7 35 G.....T.G.......G............. TGGCTTCTTATTGCCTGTTGTATCTTTTCTGGTAG 2286385 30 80.0 0 .....G..C...G..AG............C | ========== ====== ====== ====== ============================== ===================================== ================== 6 30 94.5 36 ATTGAACATTAACATGAGATGTATTTAAAT # Left flank : AAAATCACTTGGAAAGCTTTCTATAAAACCTTGTAAAATCAATGGGTATATGATATTCTTAGAAATAAGGAATGGCTATTTTACTATGGTCGAACAGTAACATAAGATGTATTTAAATAGCATATAATCAATTTTCTTACCCTTTTCAGTATGTCGAACAGTAACATAAGATGTATTTAAATTAATAATTTCATTCCTGGATCTAATTTTTGTATTAGTTGAACAGTAACATAAGATGTATTTAAGCAGAGAACTTAAATTTGTGATTTGGTGTGAGTTGCTTACTTCTTGGAGGAGAGGAGTAGGAGTTTCATTAATTGAATTTTTCCAGGTGCAATAAATTTGCGAACCTATTCTAGACGTTGATATATAAGGCTTAGAATAGGTTTTTATCATGTGCTTATGAAAAAACAAAATCACTTGGAAAACTTTTTCTAGAACCTTGTAAAATCAATGGCTATATGCTATTCTTAAAAATAAGGAATGGCTATTTTACTATG # Right flank : AAATTAAAATCCATGATTTTTTCTCTTTAAAGTTGTTTAGTTTTTAGAGCAGCGTTGATAATATATCAATTTTTAAGAGAAGTCATTTTAGACTTCTCTTAAGTGGTATTTTATTTAATTGTATAAAGTACATTAGTTAAAACTTATTTTTTCAAATGTACCCTTTTCTATGTGTAATTCAATATCAATATCTGCTTTTTTATAACCTACTAATTTTATACGATTATTACCTTTTTTTATTGGTAAAGTTAATGATGTTGTTCCTTTCATAGTGGCTTTATCTGTATTTTCTACAAGATTAACAACCGTATTGTCAGGAGATATTAAAACGATTTTTGCCTTTCCACTTTTTACTGATAAGATATATGGAACTTTCAAATCAAAATCAGAACTACTTTCATATGTCCAAATAGTTCCACTTCCACTTAATTTCAACTTCCCTTTATATATTCCAGATTCTATGATTTCATCACTTTTATCTAATCCAAAAGTATCATATA # Questionable array : NO Score: 5.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 2287127-2286970 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014174.1 Clostridium botulinum strain B609 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ===================================== ================== 2287126 28 100.0 36 ............................ ATAGCATATAATCAATTTTCTTACCCTTTTCAGTAT 2287062 28 100.0 37 ............................ ATTAATAATTTCATTCCTGGATCTAATTTTTGTATTA 2286997 28 96.4 0 ..T......................... | ========== ====== ====== ====== ============================ ===================================== ================== 3 28 98.8 37 GTCGAACAGTAACATAAGATGTATTTAA # Left flank : AAATAAATTTGAAATTATTGTTAATGAAGATGAAGTAAGCCAAAGAAAAGCAACTATAGCTTTAGGAATGGGTTTAGGTGAGAAAGGAAGCAGTTTAGGTGCAGGATTTTGTATTTACAGATAAACTTTAAATAGGCGTTTATTTATTATTGTTGAACCTTAATATGGGATGTATTTAAATTTTTCTTAACTTCCTTAAATGCTTACATATTCTTTGATTGAATATTAACATAGGATGTATTTAAGCAGAGAACCCAAATCTATGATTTGGCGTGAATCGCTTACTCCTTCGAGAAGAGGAGAAGGAGTTTTATAAATTGAATTTTTTCAGGCGTAACAAATTTCAGAACCTATTCTAGTCATTGATATATAAGGGTTAGGATAGGTTCTTGTTGAGAATTTTTCGAAAAGTAAAATCACTTGGAAAGCTTTCTATAAAACCTTGTAAAATCAATGGGTATATGATATTCTTAGAAATAAGGAATGGCTATTTTACTATG # Right flank : GCAGAGAACTTAAATTTGTGATTTGGTGTGAGTTGCTTACTTCTTGGAGGAGAGGAGTAGGAGTTTCATTAATTGAATTTTTCCAGGTGCAATAAATTTGCGAACCTATTCTAGACGTTGATATATAAGGCTTAGAATAGGTTTTTATCATGTGCTTATGAAAAAACAAAATCACTTGGAAAACTTTTTCTAGAACCTTGTAAAATCAATGGCTATATGCTATTCTTAAAAATAAGGAATGGCTATTTTACTATGATTGAACATTAACATGAGATGTATTTAAATTGATGAAAAATAATTATGCACCTGGATATTTAAGAAATTGAACATTAACATGAGATGTATTTAAATAAATTTATGGATCTAATACTCATAAAGATGATTTTATTGAACATTAACATGAGATGTATTTAAATTTTATTAGTGCCATTCCCGCTGGAGAGTATTGTGTCCATTGAACATTAACATGAGATGTATTTAAATAATGTTAAAACAGTTAC # Questionable array : NO Score: 5.30 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAACAGTAACATAAGATGTATTTAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //