Array 1 93304-93526 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFPP01000006.1 Clostridium botulinum strain SU1575NT U21066_6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 93304 29 100.0 35 ............................. TTCCTTATTGATTCAAAGATGCTTCTTTGTTTCTG 93368 29 96.6 37 ....G........................ TAGGAACATATGAGCATGATGATGTAAGAGCAGAATA 93434 29 100.0 35 ............................. CAAACAAAAACATTTAAGGAATGTTTTCTAACAAA 93498 29 96.6 0 ..............T.............. | ========== ====== ====== ====== ============================= ===================================== ================== 4 29 98.3 36 ATTTAAATACATCTCATGTTAATGTTCAA # Left flank : AGTTTCTATTTTATCTATAAATTCTTTACTTAATCCCCTAATATTAAAAATATACAACCTATCTTTTTTATAAAATTTATCTCTTTCTATAGGATAAAAACTATTAAACACATAATTTTTATACTGTTTCTTTGGATGTATTTCTTTTAAATCGTTATCCAAAAGCATACTTTTATTTATGTTTTTCCCTATTATATATCCACAATCTTCAAAATATATGTCTTTTTTTAACATCACTGTTGCAATCAGTTCCCAAAATTCCATTTATACACCTCTTTATACAAATTTATCTATATTATACCATACACCCTTTAGTTAATATAACTGATTATTCTACTTATATTTTAAAAATATTATTATTTTTATTAATAATAAGTTAATTACTCATCATATTCCATTCTAAAACTTCGCATAAAATAAAAGCCTTAGATTATTCTAAGACTTTTAATGATTCTTATTATTCAACATATGGCTAATACTTTAGAAAATGTATTAAATAC # Right flank : ACCATAGTAAAATAGCCATTCCTTATTTTTAAGAATATCATACAACCATTGATTTTACAAGATTTTAAAGAAATTTTTCCAAGTAGTTTTGCTTTTTACAAATATAAAATAAAAACTTACCATAAGCCTTATGTGTCAACGCTCTAAATAGGTTTTAAAATTTATTTTGGTTGGAAAAATTCAGTTAACTTTACAATATATTTGGATTGCGCAATAAAAAATCGCAAATTCAATTTCTTGAATAATGCGATTTTTTACGTTTATTATTATAGTAAAATAGTTCCCTTTGCCAAAATAGCTACCTCTCCAGACACTAATATTTCTTTTTCAGAAATGCTCATAGAAACCTTAATTTTACTAGGTCTGCCGACAAATCTTCCTTGATTTATTATAATCTCATGACCTACATTAAAAATATTATGCTTATATAAATATGCACCTAATGGTCCAGCTGCACTTCCTGTTGCAACATCCTCAACGTTTCCTTGATTATCCCAGGT # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCTCATGTTAATGTTCAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 100118-99770 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFPP01000006.1 Clostridium botulinum strain SU1575NT U21066_6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 100117 30 100.0 35 .............................. AGTGCATCTACAAGTGTTGTCTTACCGTGGTCAAC 100052 30 100.0 35 .............................. GAATATAAATCAAAGTTAATTATAAAATATAAAAA 99987 30 100.0 34 .............................. ATTTAGATCCTTTACAAAAACAATTTTATATAGA 99923 30 100.0 36 .............................. CTAGAATACTTTTTAAATATATCAGCATAACGTATT 99857 30 86.7 28 A.......A......GA............. CTTTTTTTAACCTTGCCACCCATACTTG 99799 30 86.7 0 ........A.....AG.....C........ | ========== ====== ====== ====== ============================== ==================================== ================== 6 30 95.6 34 GTTGAACATTAACATAGGATGTATTTAAAT # Left flank : TTTACTATGGTTGAACAATAACATGAGATGTATTTAAGCGAAATTTATACAATATCAAATGTAGTAGAAGAACGTTGAACAATAACATGAGATGTATTTAAGCAGGGAACCCAAATCTGTGATTTGGTGTGAGTCGCTTACTCATTCGAGGAAACGAGAAGGAGTTTCATTAAATAATTAGATATTTAGTATTTTAAGCTTATGTATGGCTTGTAAACATTGAACATTAACATAAGATGTATTTAAGCAGAGAATTCAAATCTGTGATTTGATGTGAATTGCTTACTCCTTGGAGAGTAGGAGAAGGAGTTTCATTAATTGAATTTTTCCAGGCATAATAAATTTATAAACCTATTCTAGTCATTGATATATAAGGATTGGAATAGTTTTTTATTTTGTATTTATAAAAAACAAAATCACTTGGAAAACTTTCTCTAAAATATTGTAAAATCAGTGCTTATATGATATTCTTGAAATTAAGGAATGGCTATTTTGCTATG # Right flank : TTGTACACAATCTGAATTTATGGTGACATAATTACTGAAATTAAAAATACGAATAATGTTCTTTGAAAATTGAATAATACGGTATTAAAAAAATGGAAATGCTTACATCTTAATATCAATAGCCAGTATAACAATATAGAAAATATGTTGTAGTTTTATATAATAGTTAAGTCCAAATAGTAAATTATGAAGTTAAATTAAATATAATTCTTAAAAATTATTTTTAGCAAAATAGGTCAAGTAAAAATCCATAAGAATATGTTATCCTTTATTCAAGAGGTGAGAACATGGGAAATTGGGAAAAGATAAATGCGGTATATCGTATGCAAATTTATATTGAGAATCATATAGCCGAATCAATAACTCCTTGTATGCTTGCAAATGCAGCAGGATATTCACTATGGCACTCTACAAGGGTTTTCAAGGAATTAACAGGTAAAACACCATTTGAATACATTCGAGCACTTCGTTTGTCTAGGGCTGCTGTTAAATTGAGAGAT # Questionable array : NO Score: 6.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //