Array 1 265692-266732 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACTTT010000004.1 Francisella tularensis subsp. novicida strain F0825 tularensis_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================================================================================================================================================= ================== 265692 36 73.0 34 T...T...AA..AG.C.....AA.......-...... AATTATCAAAGCAAATGAAAAAGATTAGCTGTAA A [265699] 265763 37 83.8 169 ..........T.AG...........T...TG...... TTTAAAGTAGCTAGAAAATTCACTTTTAGACCTACTTATTTTTATTATTTGAATGCTTTGGTAGTATGTTGAGATCAACATTTTGCTGTAAAACTGTTTTCGTGATTATATTATTTGATACAATGTGTCCAACTAGAAACTTTTAGGAATAATTTACAAAATTAATTAA TG [265788] 265971 37 94.6 34 ........C...A........................ ATCATGGGACATATGGCGGTAGCACAGTCAATAG 266042 37 97.3 34 ............A........................ TCAATGCTGTACTAGAAACTACATACAAACTATA 266113 37 100.0 33 ..................................... TGGTTCTACTGGTGGCGGTGGCACTGTCTCTTC 266183 37 100.0 35 ..................................... AAGGGCATGCAAATCAATGGAGAAGTTTCAACTAA 266255 37 100.0 35 ..................................... TATCAAAATATCTTTGTTTTGTACAACATAATGAA 266327 37 100.0 35 ..................................... CTGTGCTTTGACTTCTTGTTCATCAGCTTGATACT 266399 37 100.0 37 ..................................... TCTTTAAATAAGATGCTGGCAAAAATTCAAGGAGAAA 266473 37 100.0 37 ..................................... CTGAGATGAAAGCTCTTGGTGATGAAGCTGAACGGGT 266547 37 100.0 37 ..................................... TTTAGTTTGCATTTTTACTATTTTATGTATTTTAGAT 266621 37 100.0 38 ..................................... ACGCAAGAAGTAACAATTTATCGCGATTATGCTTATAA 266696 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================================================================================================================================================= ================== 13 37 96.1 47 GTTTCAGTTGCTGAATTATTTGGTAAACTACTGTTAG # Left flank : AACGACAATGAACACATTTGAGATTACAACGTCTAGTTGTTTCCCATGCCATCCATTTAAGTTGATGTTTCACTAAATTCTTAATCCAAAACGAAATATAATTTTGCTATAACTATTATAACAAATAATCATTAAACTAACTGTATAAAGCTAATAAAAATAACTTTAAAAAAGATATTTTAAAGACCCTTTTAGCTTGGTTAGTTTGAGATTTTTATTTATACTTTATAAATACTGATAATCTCAATATTAGTTATGTTTACATTTTTGTTGTTAGCTATCGCGTTTATAGCAACCCTATATGCTTTATACTACTTTATTTTAGCTATTGTTAAGCTAATTGTAGCGATATATCATTTTAACTATTTTTTTTCTAAAAATGATTCAAAAAATTAATTAATTCATAAAATAAATTGCTTAAAGTCTATCAAAACTTTGTTTGTCTATTTCTGAAAGTAGTATTTAGATAAAATCTTATGAAAAATTATTTTTAAATGAGT # Right flank : GAGCCAAAACAAACCTAGTGTTTGCAAGGTTTTGAGAGTTTTTTAAAATGGTATTTTTTCGCAAATACCCTAATTGTAAAAAAACGTAGACATTTTGCGAAAAAATATCTAAAATTATAAATGTACCAAATAATTAATGCTCTGTAATCATTTAAAAGTATTTTGAACGGACCTCTGTTTGACACGTCTGAATAACTAAAAAGCAAAAATTTGCCACCCAAGTGGCTTTTTTTGTTTGGCAATTAATATATCTTGTTCGCTTCTTAGCTCGATTACATCAAGATGGTTGAGAAATTTAATATGGAGATTTCTAAATATTTGCGAGATTTCCGCCTTCAGTGACAATTAGAGATTTTACTATCAACGATCATTACAAAAGTTGTAATATTCACATTGTATACATTGATGATCCGTTGCAGATGAATCTGGCTTATTACCACTATCTAAAGTACTAAGGATATCGCTGATAGTTTTTATAAGTTTGTTGATTAACTCATCAG # Questionable array : NO Score: 4.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:-1.09, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGTTGCTGAATTATTTGGTAAACTACTGTTAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: F [matched GTTTCAGTTGCTGAATTATTTGGTAAACTACTGTTAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.30,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [22-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //