Array 1 58-423 **** Predicted by CRISPRDetect 2.4 *** >NZ_CMZO01000174.1 Neisseria meningitidis strain NM2700, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 58 36 100.0 30 .................................... CTTCTGCCTTTTTACAAGCTCGCTTTCTTT 124 36 100.0 30 .................................... ATGATGCAGGCTGCTCCGTCATCGTCTGCA 190 36 100.0 30 .................................... TTGCGTCTATGGTGTCCTTTGAGATGTCCA 256 36 100.0 30 .................................... CCAAATAGAAATACATACGCCGAGTAATTA 322 36 100.0 30 .................................... AACGGCAACCCACTAAATTTTGCAAATGCG 388 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 6 36 100.0 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : CCCTTTCTCATTTCGCAGTGCTACAATCTTTAACTTTGACCGTGTGCAATCCAGTTAG # Right flank : TCCCCACGGCGGAAACCATTGCCACAAAACGTTGTAGCTCCCTTTCTCATTTCGCAGTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA //