Array 1 2567681-2563991 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031716.1 Acinetobacter wuhouensis strain WCHA60 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2567680 28 100.0 32 ............................ AGATAGACAAAAGTTAGAAGGTTGGGCGGCTC 2567620 28 100.0 32 ............................ AACATAAAGTTTTGCGCCTTCGTTATATTTAT 2567560 28 100.0 32 ............................ TTACACTGCTCAACAGCATCTAAGAAGTTTTT 2567500 28 100.0 32 ............................ TCCCAGGCAAACTGCATTTCTGCGAGCTTTTT 2567440 28 100.0 32 ............................ ATACAGATCATGACAACAAGTTCGTTGATATT 2567380 28 100.0 32 ............................ ATCTGGCCGAGTCTTAAAACGTATTCGCGCAT 2567320 28 100.0 32 ............................ TGGTAATTGCAGATAACAACGACATGGACCCA 2567260 28 100.0 32 ............................ AGTTGAGCCAAGTACAATTTTGCATGAGTTTC 2567200 28 100.0 32 ............................ TGTGCAAGCGCATTAAATACACGTGCAATGTC 2567140 28 100.0 32 ............................ ATGCGACTTTGCTTATAAAGAAAACTTGCTGG 2567080 28 100.0 32 ............................ GTGTTGCTGCTGAACTTAGACGCGGCACAATT 2567020 28 100.0 32 ............................ CATTACTGATTTGAGCGCCTTTCGGGAAAGGT 2566960 28 100.0 32 ............................ AAGCTTTAGACCAATCCAACATACGAGCTAAA 2566900 28 100.0 32 ............................ TGAACCATCAGTTGCTCGGATCTCTTTCAATT 2566840 28 100.0 32 ............................ TCTTAATGCCTGAAAAGGACGAGTTTCCAAAA 2566780 28 100.0 32 ............................ ATATGAAACATGACAACTGGGACATAGCTCTT 2566720 28 100.0 33 ............................ AAATCTTTATTTCCTCGTTCATTTTGAGTTCCG 2566659 28 100.0 32 ............................ TGATAGTGCTTGTGGTTTAAATCGGCTTAATT 2566599 28 100.0 32 ............................ ACCAAGGACGCATAAAAGGTGTCGGTGTGGAC 2566539 28 100.0 32 ............................ GTTGAAGTCGATTTCCACGAGCTTTACAAATG 2566479 28 100.0 32 ............................ TGCATTCATTGTTAATCTGATAGAAACGGCAG 2566419 28 100.0 33 ............................ CTTCAAAAAACCCTATGATTTTAGAATTATCTA 2566358 28 100.0 32 ............................ TAATTAAAACATTTTTTGCACCGTTATAAAGT 2566298 28 100.0 32 ............................ TTTACTGGTCATCACTATTTCAGACCGTTCGA 2566238 28 100.0 32 ............................ AAGTAATGGCGAAAGCCAAGGCAGAAACAATA 2566178 28 100.0 32 ............................ GCAATGATCAAAGCAATAAAACCGAGTAATTG 2566118 28 100.0 32 ............................ TGTTGTTTGTCCTAATCCAAAAGATTTAAAGC 2566058 28 100.0 32 ............................ AGCAGGAATCTCTTTTTTAAAAGACTTAAGCA 2565998 28 100.0 32 ............................ ATCAAGCAAGGATTGAGTTGCAACAGCTAAAG 2565938 28 100.0 32 ............................ GCAGGAAGTAACTCAAGCAAATAACTATGTTG 2565878 28 100.0 32 ............................ GCCGTGAAAGGGCGACGCTCCTGACTGTAAAT 2565818 28 100.0 32 ............................ GCTTCAGTTGTTAATTTCATTTTTGTATTCCT 2565758 28 100.0 32 ............................ AATGTACATATTTACAGAGCTAGGGAGAGAAA 2565698 28 100.0 32 ............................ TACAGTTAACATGTTTACTAGTATTTATTTGT 2565638 28 100.0 32 ............................ TATGCGATTTTGTAGTTAAACTGCGACTGAGG 2565578 28 100.0 32 ............................ TGCTTCACCATTTGCGCCACAATGCACGTTCT 2565518 28 100.0 32 ............................ TTTAATCCTCAAATTACAACTCATTATATAAA 2565458 28 100.0 32 ............................ CGACCAAAAAAAACGTATGAAAGAAGAAGCAA 2565398 28 100.0 32 ............................ TCCAAACATAAATTAAATTTTTTCTTTTTCCT 2565338 28 100.0 32 ............................ TGCGAAGCATGAAAAAGTCCACGTTCTCTGGT 2565278 28 100.0 32 ............................ AAGGTGGATGGAAAAAAGCACGTCAAGAGCAA 2565218 28 100.0 32 ............................ GAACATTAATGAAGAAGGCGAGATGTATTATG 2565158 28 100.0 32 ............................ TCGACTGCAGGTTCAAACTTTTTTGATTGAGC 2565098 28 100.0 32 ............................ ATGGTCAGGCGGTCGTAAAGGCAAGTTGGCAA 2565038 28 100.0 32 ............................ TAATAGTTTCGCCTTGCCCATTGTAGCGCTCA 2564978 28 100.0 32 ............................ ATACAATATTTTATTCACTTTCCACCCACCCC 2564918 28 96.4 32 ............A............... TCAATTCTTTCCTTTGTTTCAATTATAAAGTC 2564858 28 96.4 32 ............A............... AATGGATCCTACTTCAGGAGCAATTGGTCAGG 2564798 28 92.9 32 ...T........A............... TTCCACTTCTGAGCCAAAACCTGAAAAAGTAC 2564738 28 96.4 32 ............A............... AAGACGGCAGTTGTTGGTTAAAGTCAATTTCT 2564678 28 96.4 32 ............A............... TTCACCATCAGAAAGCAAAGCCGACAATTCCG 2564618 28 100.0 32 ............................ ATTTTCTCCAAAGTTCAGCATTCTTGGTGTCG 2564558 28 100.0 32 ............................ ATTGCTTGATATGAGAGAAAAGCCAATCCCAA 2564498 28 100.0 32 ............................ TTATGCTGACGCATAAACATTGGATGGTGTGT 2564438 28 100.0 32 ............................ TTTATAAGTCAACCCCACCAATGGGGGTGCTT 2564378 28 100.0 32 ............................ TCAAGAAGTAGCAGACCTTGTTAAGCAAGAAT 2564318 28 92.9 32 ...T........A............... ACATTGCGGGCAATGGTCGTCAATTGTGGCGT 2564258 28 96.4 32 ............A............... GCAAATTGTTGAGAGTGGTAATACACCACAGG 2564198 28 96.4 32 ............A............... GCGCTCTTTGGATCAATCCTCGGCTTGTTCCT 2564138 28 100.0 32 ............................ AACTAAATGAAAATCCGCCCGCCATTTACGCT 2564078 28 96.4 32 .......C.................... ATTGTGGTAAGTTCCACGAAATACAGGTGTAG 2564018 28 96.4 0 ............A............... | ========== ====== ====== ====== ============================ ================================= ================== 62 28 99.3 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : AAGTGGTTAGAACGTTATTTGGACTATGTACATATTAGTTCAATTAAGACTGTTCCTGATGACAAAGTAACGGGTTATGCAATATATAAGCGCAAACAGGTGAAAAGCAGTGCAGAGCGCTTAGCACGTGCTGAAGCTCAAAATGGGCGTTACGATTATGAAAATGCTTTAGCGCATTATCGGAAATTTGTGAAAAGTACCAATTTGCCTTTTATTCAAATGTTGAGTGATAGTACAGCGCCTAATTTAGAATTAAAGGATAAAAATTACTTTAAACTTTTTATTGAAAAGAAATCTGCGACAAAATCTGAAACTCAGGTTTTTAGCACTTATGGTTTAAGTTCGGTATCGACTGTACCTGAATTTTAACCCAATCTTTTTTCACTCTTTAACAGTCTAATAAAATCAATAGGTTATAAACGTGGGGTGAAACTTGGGTCTTTTATGGATTTTAAGGTTTAACTCACTGTTATAACTTTATTTTTTGCTGTAAAATTACA # Right flank : AACCACTACAAATTGAGCATCCAGAAAAAAATCAGGACAAAAATCGTCATATGCAAAATTTGAATCGGAGCAAAAACTAAAGCAAAACGTGTTCCACCTGTAAGGAGAGCATTGACCGATTTTGCAATTGCGTGTGCGCCCAAACCAAGTCCAAATGCCCAAGCTAAAACTGAATTACTAGGCTCGCCTTGAATCACAATTGTTGAAAGCGCGCCATGAATTTCAAACAAAGATGCCAAAAGCGTTCCCGCAATTAACCCAGCATCACCAAGAATAACATTCAGCCCATAGACACCCGCTTGAATCACCGTTAACGAAATAACAATAATCGCAGCCTCTTTTAAACTAAACATCCGACTGTCTGACTGTTGAACACTTTCTAAAGTTTGAGAACTGCGCATGAACCATACCGAGAAAATGATCAAAATCAACATGGCAATAAGGCTTGGAAGAAGAATGACTTTAAACCACGACAAACTTATCCCAATGACAATAATCAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 2632223-2629252 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031716.1 Acinetobacter wuhouensis strain WCHA60 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2632222 28 100.0 32 ............................ TGCCAACCATCCCTATAAAACACTTATTCCAA 2632162 28 100.0 32 ............................ ATGTCAGATCGAGTGTTTTTGCTACATCATTC 2632102 28 100.0 32 ............................ TGCATCAAAATGAGCATCAAAAACATCTTGGG 2632042 28 100.0 33 ............................ TCGTATATCCGTTGCGCCTATGATGGATTGGCA 2631981 28 100.0 32 ............................ AACGACTTTCAGATAAAAACAACCATCAGGAT 2631921 28 100.0 32 ............................ ATCTTAACTGGATCACTTTGCGTGCCAGTAAC 2631861 28 100.0 32 ............................ TTAATGACGACACAATTACAACTCCATCTGGC 2631801 28 100.0 32 ............................ CGATGGATAAGTCCGCATAACGGTGTTGCTGT 2631741 28 100.0 32 ............................ ATAGATTGGTCGCTGATCTTTGTCAATGTGGC 2631681 28 100.0 32 ............................ TTATCCCAAAATGATTTTTCATCTTTTTGATG 2631621 28 100.0 32 ............................ CTGTTTTGGGAAACCTATCAAGTAATTTTCGG 2631561 28 100.0 32 ............................ TTAAAACGCAATTCAGCGCATTCTATACATCA 2631501 28 100.0 32 ............................ TCAATTTAATTTAAAGAACTGATTTGATATTC 2631441 28 100.0 32 ............................ TGTTCGTATAAAGATTGACTTCAGTCTGACTT 2631381 28 100.0 32 ............................ TTAATGGTGGCTTTTTTATACGCAATTGATTA 2631321 28 100.0 32 ............................ CGCCGTGTTGCGGGCTTTTATCGTATGAAGAG 2631261 28 100.0 32 ............................ GTAAGAATGAATGATAAAGAGCAAGAATTGCT 2631201 28 100.0 32 ............................ GATATTTTGACTTATATCGGTTTACTTGTTGC 2631141 28 100.0 32 ............................ GATATTTTGACTTATATCGGTTTACTTGTTGC 2631081 28 100.0 32 ............................ GTTCGATAGCTTCGAGAACACTTTTATCGTCT 2631021 28 100.0 32 ............................ CCTAAAGTTCTATATCGGGTCTATATCTCGAC 2630961 28 100.0 32 ............................ TGAATCAACTAAAGTAGGCATGTTTGATTTAC 2630901 28 100.0 32 ............................ GCTTGAAACTGGTTGCGGTTGCCACTCTAAAT 2630841 28 100.0 32 ............................ GATGGAACAATTAGTATAACAGTGCGAAAACC 2630781 28 100.0 32 ............................ AGTGGAAAAATATTTAAGATTATTAAGTCCGA 2630721 28 100.0 32 ............................ ACAAGGGCAACATGACGCGGTGCGACTTTCAA 2630661 28 100.0 32 ............................ AATGGGATGACGTGAATGTCGATGGGCTTACA 2630601 28 100.0 32 ............................ TAATGTACACATCGCTTCCTGATAGTGCGGAG 2630541 28 100.0 32 ............................ GTGATTGTCACAGCATGCCAAGCAATTTCTAT 2630481 28 100.0 32 ............................ ATGCGCCCAAGTTAAGAACATTCCATCGGGTG 2630421 28 100.0 32 ............................ ATGCGCCCAAGTTAAGAACATTCCATCGGGTG 2630361 28 100.0 32 ............................ AGTAAGACTTCTATGCGTACAATAATCTGTAA 2630301 28 100.0 32 ............................ ACGTAATCTCATTAGTGCAGCAACACAAACAG 2630241 28 100.0 32 ............................ CGTGTCGATATTGCACATGATGACTTTGACGG 2630181 28 100.0 32 ............................ TTAGATGAATTTCATCATTTGTATAAGTTGCA 2630121 28 100.0 32 ............................ ATCGGAAAATGTCGTTTTAAAACTCGGAAAAC 2630061 28 100.0 32 ............................ AGTGGAAAAATATTTAAGATTATTAAGTCCGA 2630001 28 100.0 32 ............................ AAAGGCATCAAAGCAATTCGCTTAGCGATGTA 2629941 28 100.0 32 ............................ TGTGTTGTTGATATTTATGAAGCACAGCAAAT 2629881 28 100.0 32 ............................ AGCAGGAATCTCTTTTTTAAAAGACTTAAGCA 2629821 28 100.0 33 ............................ TTTAACAGAAAGCCTTTTGGGCGATCTTGCAGT 2629760 28 100.0 32 ............................ AAGGATATAAAGATCCAGTTGATGATTCTTTG 2629700 28 100.0 33 ............................ TTTAAGAGATAGTGAACTTGTGCATATTTTAAT 2629639 28 100.0 33 ............................ CATAATCGCGAATATCACCATTAAACCAGTGGT 2629578 28 100.0 32 ............................ ATTTCTAAACGAGTAAACCAGACTTTCAGCAA 2629518 28 100.0 32 ............................ AATGTAGACGTGAACATTGCGCCGCCATAGTG 2629458 28 100.0 32 ............................ TTGAGGCGGTCTTTCGCAGTATGTAGCACCGC 2629398 28 100.0 32 ............................ ATGGGGTGATATTCCCTCTCGTGAATATTTGG 2629338 28 100.0 32 ............................ TGTATTTGGCACAATGAGAGAGAAATAAACTG 2629278 27 89.3 0 ....................T...-..G | ========== ====== ====== ====== ============================ ================================= ================== 50 28 99.8 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : TTTAGTGATAGGTGCTTTTGTGGAAGCACGTTCGTGTGAGCGTTTTTATGCTTTAGCACCGATTGTTGATGAAGAGTTAGGGCGTTATTATCGTTATTTGTTGAAGTCTGAATCTCGTCATTATGAAGATTATTTGACTTTGGCTTTGGATGTTGCCAAAACTGCGAAGTTGAAAGATCCTGAAGAGGATATTCAACAACGGATTGAGTTGATTCGTGAAGTGGAAAAAGAATTAATTTTAAGTCCAGATAAGTTATTCCGCTTTCATAGTGGTGTACCGATGAAAGCTGTTGCTTGATGTTTTAAATGTTTAAAGAGAGGGAAGTGGTGACACTTCCTTTTTTTGTTTTGACAAAGCCAAGTTTTTACCCCAATATTTTAAGCACTCTTTAACAGCTTATATAAATCAATAACTTGCAAGTTGAATAAAAAACTTGGGTATTTTGCATATTTTTGAAATAACTCTATGTTTTTATTTTGTTTGTGGTTAGAGTTTTACT # Right flank : TATTGATATAAAAAAAGCCCACTTCGTAATGAGTGGGCTTTTTAGTATTTGGCTCTCCAACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCGACTGAGCTATTGGAGAATCTGAATGCGATTATAAGGAGATTTAAAAAGGGGTCAAGCCTTAATTGTCATGTTGGCTTCATTTTTTAGTTATATGCTTTTAATTTGAGCAAAAAACTGAAAACTTTCAGAAAAAATAATTGAAAAGCTTGCAACAGCTAAATTTGCTTGTTAGATTAAATTCATAAAGTGAGTTTAAGCAATGCTTAAACCGTGTGGATTTAACCAACTTGCCAGCACTAAAATGGCTAAATAGGAGACAGCGAATGAATACGCTTACGATTTCTCAAATTTTTGAAAACCTCTCTTTTTATCAAGACAATTATTTGTCTATTCTACAAAACCCTGAACAATATTACCTAGAAGTTGAGCATGCTCATCTCGATGTTTGGCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //