Array 1 851578-853396 **** Predicted by CRISPRDetect 2.4 *** >NC_018413.1 Mycoplasma gallisepticum NC08_2008.031-4-3P, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 851578 36 100.0 30 .................................... AAAGTTGTATTGTGTTTGAACCATTTCACT 851644 36 100.0 29 .................................... ATTTAACAAAGAATGAGATCGAATTGAGT 851709 36 100.0 30 .................................... AGGTTGTTCATGATTGACATTAAAATTAAA 851775 36 100.0 30 .................................... ATTCAATTGCGTTTTTTAAACGTACAAATA 851841 36 100.0 30 .................................... TTTGTTTTTATCTTGATTCGAAAGACATTA 851907 36 100.0 30 .................................... ATTCTGCCGCCACGATATCGATTTCAGTTC 851973 36 100.0 30 .................................... ATAAGAACAAGAACTATCTAACGCTTTTTT 852039 36 100.0 30 .................................... GTAAGTTGTCGATCTCTTCACTAACGACAG 852105 36 97.2 30 ......A............................. TTGTTGAGCTAATTGGACTTAAAGCAAATA 852171 36 100.0 30 .................................... TTGAAATTTGAATGTTTGGAAATCTTCACG 852237 36 100.0 31 .................................... GCAATAGTTTGTAAGCAAAACGTGGGAGGGG 852304 36 100.0 30 .................................... AATTAAAAGTTAAGAACGTTGTTGCTGACG 852370 36 100.0 30 .................................... TAGTGTATTTTAACCACCGTTCAAGCGCTC 852436 36 100.0 31 .................................... TTTTTTGTTAATGAATTAAAAATCTTATCAG 852503 36 100.0 30 .................................... TTTTTTAAGCTCATCTTCAAGGTGTTGATT 852569 36 100.0 30 .................................... TTTAAGCGTTCCGATCGTTTGTCAAATGTG 852635 36 100.0 30 .................................... AACTTATCTGCATAACCCTTTTGAATCTCT 852701 36 100.0 30 .................................... AAGTTGATCATTTAAATGAGCTTTTAAAAA 852767 36 100.0 30 .................................... ACGTTTGAGGTTCAGCTAATTCTGGGGTTA 852833 36 100.0 30 .................................... TAATTAATCGCGATAATACAATGTATTTTG 852899 36 100.0 30 .................................... TTTGATCATCGACTGTTCAAAGAAGGCGTA 852965 36 100.0 30 .................................... TAGTTAAATTAATTTTTAAAGGATGGTTTA 853031 36 100.0 30 .................................... TAATAATCTTAATTTTAGTGTGTTTGTCGT 853097 36 100.0 30 .................................... GAATTAAATTATCTTTATAAGTAAAATAAA 853163 36 100.0 30 .................................... GTTTTGCTTATAAATTGTTACAAGACTTCT 853229 36 100.0 30 .................................... ATGGTGACGAATATAAACCCCAACTTGATC 853295 36 100.0 30 .................................... CAACAGCCGTTGTTAAAATTAAAAAAACTA 853361 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 28 36 99.9 30 GTTTTAGCACTGTACAATACTTGTGTAAGCAATAAC # Left flank : ATCAAAGTAGTTACAGCAATGGGATTCATTGGCTCAATCTTCTTTGGTTTAGCAATCGGATTCACTGTTAAATGAATTAATACTTGAAGAATTAATAAAGCACTAGCACCAATCATGCCTGTCTTTGTTATTCCTTTAGGTGTGGGATTGTTTTATGCTTTAATCGCTGTATTTGTTTTAGGTGCTCCAATTGGATTTATCATGGATAAATTCATTAAGGCTCTTGAAGAAGCCTTTAGAAACGGTAATATTGGTATTGGTTTGGGAATAGGTTTAGGGATCTTAATTGGAGCAATGACAGGATTTGATATGGGTGGTCCTGTTAACAAAGTTGCTTTCTTAACTTGTGCAACCTTAATTACTTCAAATATCTATGAGCCAATGGGAATGATGGCTGCTGCCATTCCCATTGCCCCACTTGGAATGGGATTATGTACCTTAATCTTCCGTAAGAAATTTAATGAAGGTGAAAAATCACTTGGAATTAGTGCAATCCTAAT # Right flank : CAAAAACAAGTATTTTTTACAAACGAAAAAGTTTTATCATTAAACATATTTAATCTGAAACAAAATTTTGAAATAAATAAACTTTACTTAATCTTTTGTTTCATATTAAACAACATAATTCCAGTTGCTACTGAGACGTTTAAGGACTGTATCTTATCAGTATACATCGGGATCTTGATCTGGTAATCAGCATTCTTAATTAGTTGACTCGAAACTCCCTTTTGTTCGTTCCCAACAATTAGAATTGATTTATTAGCATAATCAACATTATAATCTTGAGCTTGATCACTTAAATTAGACACATAAGATCAAAAGCCATACTTATCTTGTAGATCCTTGATCGCATAAGATAAGTTGGCAACCTCAATTAGATTAAGATAAAAACATGCACCTAGTGATGTTTTTATCACCGTGTTGTTAATACTTGCTTGGTTGTCTTTTTTAAAGATGACCCCAAGCACATTTGCTGCCAAACAACTCCGTAAGATTCCACCAAAATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGCACTGTACAATACTTGTGTAAGCAATAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGCACTGTACAATACTTGTGTAAGCAATAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.68 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //