Array 1 12711-11461 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAILYN010000042.1 Marinobacterium sp. CAU 1594 contig42, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 12710 29 100.0 32 ............................. GAAGCTTTCGAACGGGACAGCGATGAAGTTGA 12649 29 100.0 32 ............................. GTGCGTGTAGTTGTGAACAACCCTTCTCTCTT 12588 29 100.0 32 ............................. TACGCCCGCATCAAATGCCTTCATCCCAGCGT 12527 29 96.6 33 ............................A GATGATTCTGAACAACATCGCCGACAAGGCGGT 12465 29 100.0 32 ............................. AACGCAAAAAAGTATGTCTATTGCTAGGCAGT 12404 29 100.0 32 ............................. CTGGCCGACTTCGCCGGGGTCGATGGCTGGTT 12343 29 100.0 32 ............................. ATGATATGGCTTCCTGTTATGGCATTAATCGG 12282 29 100.0 32 ............................. TGCTGCACGCTGGCATCACCAATCGCCACCTC 12221 29 100.0 33 ............................. CCGCGTAGTTCGGGTGATACAGGCAATTCCAGC 12159 29 100.0 32 ............................. CTGGCACATGATGAGTATCAGCGATTGCTTGG 12098 29 100.0 32 ............................. GTTCAGACATGCTCAGACGGCGCGGTGATCAA 12037 29 100.0 32 ............................. ACGGAAAAGCTAAGCACTCGTCAGAAGCTCGC 11976 29 100.0 32 ............................. CTGATCGATAAGCACTGCACCGGCAGCCACCA 11915 29 100.0 32 ............................. CGTAAGACTGAGCCGGTTTTCAAGCTGACCGA 11854 29 100.0 32 ............................. TAATCGGGAGGCCGCGACCATGACCACTAAAA 11793 29 100.0 32 ............................. TTGCCGGCGATAATCTGGTCCGGCGTGTTCAG 11732 29 100.0 32 ............................. ATCCAGCGCGCCATCCAGGAGCGCATCAGCTT 11671 29 100.0 32 ............................. ATCGTTGAAGACGGTCTGGTCCAGGCGAAGAT 11610 29 96.6 32 ............T................ ATTGTCGAGAAAACCGGCGATCTGGACCTGGC 11549 29 96.6 32 ............T................ TTGGTGATAAACAGCGTGGTTTGACTCGGCTG 11488 28 79.3 0 ............T.T-......AA....C | ========== ====== ====== ====== ============================= ================================= ================== 21 29 98.5 32 GTGTTCCCCGTACCCACGGGGATGAACCG # Left flank : GCAGGTACTGGCCGCCGGCGAGATCGAACCGCCGCCACCACCCGAGGATGCCCAGCCGCCGGCGATCCCGGAACCCGAGTCGATCGGCGACGCCGGTCACAGGAGCGCCTGATGAGTATGCTGACCGTGGTGACCGAAAATGTGCCGCCTCGCCTGCGCGGTCGGCTGGCGATCTGGCTGCTGGAGGTGCGTGCCGGTGTTTATGTCGGCGACGTATCGCGGCGGATTCGCGAGATGATCTGGCAGCAGATCACCGAACTGGCCGAGGAGGGCAATGTGGTGATGGCCTGGGCGACCAATACCGAATCCGGTTTCGATTTCCAGACCTACGGCCAGAACCGGCGGATACCGGTGGAGTACGAAGGGCTGCGACTGGTCAGCTTTCTGCCACAGGAACAGCCGTAAATGTGTCTCTCGTGATAGAAATAAAAAACAGCGTTTAATTCGGTGCGTTTTTAACAGTCGATTTTGCTCTTTAAAAACAATGGGTTATTTTTAGA # Right flank : GTTGATGAAGCTTTAAGTGCCAGGCCAGATGCAGCTTGATCCGTCTGCGCAAGCCCTGTCGCGGTCAGAGCCCGCTGCTACGGGGGTTACTGTTTGGTTAAGGCAATGCCGTTTTCGAAGGGAAAAAGCTTGCTATCGGAGTGGTATTACCCTGTAGATGCTATGAATGGCCTCCACCGTAGGTGTTGTGGAGCCCTGCGGGCTCCTGGTCGACTGAAGTCAACCCTACAGTCACCGCCGCAGTTACTTAAGTGAACAGTATTATGCTGCTATCGGAGCCGTGCTTTGTAGCAGCACGCTCCGCGGGCGACATCCGCGGACTACGCCGCTCGGTCGCGGATAAACCTACCCGGCCGGACCCCCTTATATGGCCCCACCGGTATCGGCTGCAATTGCAGGGTTCTGGGCGATCGGGCTGTTCTACAGGCCAGATGTAGGGGGTATAGTAACCAAGGTAAAGCTTGCCATAGTCCTGGCCAATACAAGCTGCTGTTCAGCTT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTACCCACGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGTGCCCACGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.70,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 17339-14928 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAILYN010000042.1 Marinobacterium sp. CAU 1594 contig42, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 17338 29 100.0 33 ............................. CGGCCTAAATCATGGCTAGACTATCTGACTGCC 17276 29 100.0 32 ............................. GTAGCCATCCAGCGAGAATGCTTTGACGTGGT 17215 29 100.0 32 ............................. AAATCACTCGCGTCGGAGACGGTGTTGGATGG 17154 29 100.0 32 ............................. CCGACCGACGAGATGTGCGATGCACTCGACAG 17093 29 100.0 32 ............................. GATCAACCATGTTCACCATCCACAACCAAGAA 17032 29 100.0 32 ............................. CAGGTGTTGCTGAAGGTCACTGCCGCCAGGGC 16971 29 100.0 32 ............................. CGCTAATGGTCGGGCGCCAGATAGGTGACCAG 16910 29 100.0 32 ............................. TTAGACCATCATAACGCTCAACAAAAGTGGTG 16849 29 100.0 32 ............................. GTTATACTTGGAACTCGCCAGAACGTTGAATG 16788 29 100.0 32 ............................. GCCGCAGACGCTGCCCACGAGACTATTAGCAA 16727 29 100.0 32 ............................. CCGCCCAGGTACGATTTGTTATCCCAGCGGTT 16666 29 100.0 32 ............................. ACTGGCTGACTGGCCGTTTTGTTGAGTTTGAT 16605 29 100.0 32 ............................. TTTTTGGTGAATATGGTATTGCTTTCCAAGTC 16544 29 100.0 32 ............................. TAGTAGACGGCCTCGTAATACTTCAGCGCCCG 16483 29 100.0 33 ............................. ATGAACCAGCGTTGTGTCCATATGGTACGCTGC 16421 29 100.0 32 ............................. TGATACAGGTACTCAACCCTGTAGCGATCACA 16360 29 100.0 32 ............................. GTTTCGGCGGCGGCTATCTCAGATGTTTTGCG 16299 29 100.0 32 ............................. ATGCCAAAAATATTTACCAATATCGTGCATCG 16238 29 100.0 32 ............................. CGCGTCACTGCGTATACCGTGCCATCAGACAG 16177 29 100.0 32 ............................. TAGCTTGATGTCGAGCGCTATGGCCTGCTGCT 16116 29 100.0 32 ............................. AGACGCTGGACCTCGATCTGGGGGTTCCGCAG 16055 29 100.0 33 ............................. ATGGTGCTCGGGCCGGATCGCTACGGCGCGTTC 15993 29 100.0 33 ............................. TAGTTACCAGGGCAACCAGCGGGAAGCGTGCTA 15931 29 100.0 32 ............................. TAGTCATCGACGCAGCCGGAGCCGACCGCGCG 15870 29 100.0 32 ............................. CTGACGAGGAGGTTGGATGGATGATGTATGTT 15809 29 100.0 32 ............................. CCGACAGCAAAACCCGAGCCGGACGCATTTGT 15748 29 100.0 32 ............................. CAATGGTCAGCGCCAGACGTTGCGGGTCCTGT 15687 29 100.0 32 ............................. CGCCCGGTAACGCGCCGTCTCACTCTTTTTCT 15626 29 100.0 32 ............................. AAGACGAGGAGGTCGATTTTTCCAGCCCGGAT 15565 29 100.0 32 ............................. TCGAGCGGGTTAACGTCACGCCGGCCGATTTC 15504 29 96.6 32 .................A........... CGTATACGAACCGTATCGTTCCAGTTTCACGG 15443 29 100.0 32 ............................. ATCCGATTCTCGACACCTCCGTGCACACCATG 15382 29 100.0 32 ............................. TTGACCTTACGCGCCACCGACCAGGGACTGGC 15321 29 100.0 32 ............................. CGACAGTACGGTTTGCTATGGCTGAATCCTCC 15260 29 96.6 32 ............C................ CTGGCTGACCACATACTGCCACTTTTTCCCGA 15199 29 100.0 32 ............................. GGATCATGCAGGCGATACCGGACGAGCCTGAT 15138 28 96.6 32 ................-............ GAGAATCCGCGCACCGTGCAGGCGTGGTATTT 15078 29 93.1 32 ..........................T.A TCTGGGTTGTTTAGTGGCCTGGCAGATGACGA 15017 29 100.0 32 ............................. GCGACACCGGCCATGCCGCCGCTCGGCGTATC 14956 29 86.2 0 ...............A.A...A.....T. | ========== ====== ====== ====== ============================= ================================= ================== 40 29 99.2 32 GTGTTCCCCGCATCCGCGGGGCTGAACCG # Left flank : TCTGCTGCCAACGGAGCTGGCCGACCAGGCCGAACTTTCCGGCGGTGGGATGTTGCCATTGCAGCAACTGTTGCGTCGGCAGGTCGATCAGGCGCTGTTCGACTGGCTCGAGCTGCGTGCCGAGCGCAACGGCTTCCAGCTGGCAGGCAATGCCCTGGAAGCCACCGGCTACGAGTGGCGACCGCTGCCGGAGAAGGGCCGCAACGCCGGCTTCAGTAGCGTCGACTACCAGGGCGCGCTGACCGTCACCGACCCGGAGCGGTTTACCCGGATGCTGCACCAGGGGCTCGGCAAAGCCCGCGCCTTCGGCTGCGGCCTGATGCTGGTCCGCCGGCTCTAACCGTTCGGTTAAAGCGCAACCGGCGGCAGAAACGGGAGGCCACACCTCCCGTTTTTTAACGCTTTTTATAGCGCTATCCGAACGGTTAAAAAACAGTGTTTAATTCGGTGGATTTTTACCGGGTTAATTTGCTCTTTAAAAACAATGGGTTATGTTTAGA # Right flank : GGAGATAACGGTATATTTTTGCACGCCGGCTCGTGTTAGCCCCACCCATATGGCTAAACCCGCCGGCCGGTTTCGGTCGCCGCAGGCAGCGGTGTTACACTGCCGCCAACCAGTCGTGACCTGCACGACCGAACGGCTAACCCGAGAGACCAACGGAATCAATGGATATACAACAAGCGCGCGAAGAGTTGACTGCCTATCTGGCGGCGGAAGAACGGCCGGCGGGGTGTTTCAGCCTGGCACAGTACGAAGGAGCCCTGGCTGCGGTCTACTCCTGCCCGGATGGCGGTTCCATGTACCGAGTGCTGGACCTTGCGCTACAGCATGATCCGGAAAGTGTGGCGCACTGTCTTTCTTCAGTGAACGACGCTTGTGTCAAAGTCTCGAATACCTTGGGCGAAGCGCTGTATAACCAGGATTTTGATCTGTCCGAGAGCTATCCGCTGGAACAACGGGGCGACAGCTATCGGCCTTCGCAAGCACTGGTCGACTGGGCCGAG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCATCCGCGGGGCTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCACCCGCGGGGCTGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //