Array 1 18971-18735 **** Predicted by CRISPRDetect 2.4 *** >NZ_VEAH01000012.1 Bacillus pumilus strain DE0333 NODE_12_length_129439_cov_64.243167, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 18970 32 100.0 34 ................................ CGATGCCTTATCACATCTGCAACTTTGATATGTA 18904 32 100.0 36 ................................ CGCGATCACCTAACGTGATACGTTGCTGTGCTGTGG 18836 32 100.0 37 ................................ ACATCAAGCGTCAGCTGATAAGTTCGAGCAAGGTCAC 18767 32 90.6 0 ...................GA......A.... | T [18738] ========== ====== ====== ====== ================================ ===================================== ================== 4 32 97.7 36 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : ACTCTACTTGAGTGTGTGGATTGAAATAATGCCGTTGTTATGTTTTGGCGATCAGCAACCATGTCGCACTCTCCAGGAGTGATTTGAATTTTGAAAAACAATAGCAGCATCATACATCGTAATTGATATGAGTATCTAAATAAAGTCTATCGTGAGTAGGTACCTTGAAAGGAATATTGACAAATGCACTTCATATAAGTGTGAAAATCATAACTCTCGCATCTGATCCAGTAGTCATGTATTTAGTGAATTCAAAGTTGTTGCTGGAATAAGTATGATGAACAAGTTTCAATAGATTTAAATAAATAGATTTCATACTAAGAAAAAGTCGGTGCGAATGTGAGGTGAACATAAAATCCCTGGAACATTCGCACCATTTCATTCGACAAAAATGAGAAAAAATGTATATTTTTTAGGAGTGAAAACAAAGTTCTATATAGAAACTTAAGGGTTTTGACGATCATTCCCTAAAAAATGTTATAATTAGGGCGAAAATCGCA # Right flank : TGCGAAAACATAACTCTGCCTCCTGCCTCAGTAGTCATGAATCTAATTGAATTCAATTGTTGCTGAAATATAAAGAAGTATGATTAACAAGTTTCAATAGATTTCATACTAAGAAAAAGTCGGTGCGAATGTGAGGAGAACATAAAATCCCTGAAACATTCGCACCGTTTCATTCAATAAAATGAGAAAAAGTGTAAATTATTTAGAAGGGAAAACAAAATTCTATATAGAAACTTGGGTTTTGACGATCATTCCCTAAAAAATGTTATAATTGGGGCGGAAATCGCAGTCGCACTCTACATGAGTGTGTGGATTGAAATACGATGATGTTGTGGACGTCGGATGTAAGGCGGTGTGGCACTTTATATGAGTGCGTGGATTGAAATTTGTAAAACTTAGCATTGAATTTTGTGGCTGCCCATGCACTCTACATGAGTGCATGGATTGAAAGAAGTAAGATCATTAAAACAAACAGAATGAATTGCAGTCGCACTTTACAT # Questionable array : NO Score: 8.75 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 28082-27721 **** Predicted by CRISPRDetect 2.4 *** >NZ_VEAH01000012.1 Bacillus pumilus strain DE0333 NODE_12_length_129439_cov_64.243167, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 28081 32 93.8 33 ...........T.......C............ GTCTATCAGTGTTCCTTTCTCTACAATGATACT 28016 32 96.9 33 ...........T.................... GATAATACGCCAAACGTCGCCCGTTCTCGTCAA 27951 32 96.9 35 ...................C............ CGCTTTGTTAATTACCTCTTGATTTCTCACTCTAG 27884 32 100.0 35 ................................ CGCTTTGTTAATTACCTCTTGATTTCTCACTCTAG 27817 32 100.0 33 ................................ ACAGTAGCCGTATTAATTACAGGTCTTATATTT 27752 32 84.4 0 ...........T....A....A...A.A.... | ========== ====== ====== ====== ================================ =================================== ================== 6 32 95.3 34 GTCGCACTCTACATGAGTGTGTGGATTGAAAT # Left flank : ATGAAAGAAATAGCCGACCGGCTAGGCGAAACGAGACAAAACATCTCAAACATCCACAAAAAAGCGCTCAACAAACTAAAAGAAGAAACAGGGGGAGATGTCCGTGAACGAAGAAAAAATGACCAATGGAGAAATGGAAGAACTCATTGAAACCTTCACACCCATGATCAAAAAGAAACTACAAAACACGGCATATCAAGAAAGAGAAGACCTCGAACAAGAACTCTATATCAAACTCATCGAAAAAATAGACAGGCTGATTTATCAAGAGGGACCTGGATTTTGGGAGTTTATTGTGGAATATATGACGAAGCTGTAAGAGGAACTGATGGTGCGAATGTGAGGTGAACATAAAATCCCCGGTGCATTCGCACCTTTTTATTCGACAAAATTGAGAAAAAAAGTATATTTTATGGAGGAAAAAACAAAATTCTTTATTGAAAGTTGTGGATTTTGCCTATCATTTCCTGAAAAATGTTACAATTAGGGCAGAAAACGCA # Right flank : TCTTGTCAGTAGGTAGCTTGAAAGATTTATTGACATTGCGCTTGAAATAGGTGTGAAAAACATAAATCTGTCTCGCCATTTTATTAATGAATTCAAAGATGTTGATGAAGCAGCGAAATAAGTATGATTATCATCAGTAATAGTTTTTAATTAAATAGAATTAAGAGAGATTCGGTGCGAATGTGAGGTGAACATAAAATCCCTGGAACATTCGCACCTTTTTATTCGACATAAATGGGTAAAAATGTATATTTTGTGAAGGAGAAAACAAAATTCTTTATTGAAAGTTGAGGATTTTACCTATCATTTCCTAAAAAATGTTACAATTAGGGCAGAAAACGCAGTCGCACTCTATATGAGTGCGTGGATTGAAATTTCCATCTGCAACCGTTGTTTATATCCATCAAGTCGCACTCTACAAGAGTGCGCGGATTGAAATTTCGGTTTGTAACTATATTTCGCACCTCTTACAGTCGCACTCTACAAGAGTGCGCGATTTT # Questionable array : NO Score: 8.51 # Score Detail : 1:0, 2:3, 3:3, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //