Array 1 358372-356529 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP023671.1 Clostridium septicum strain DSM 7534 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================= ================== 358371 27 78.6 38 A.A...-.AG.C................ TTTGTAAAAATTAATAGATAAAATATTGATTTTATATC T,G [358359,358367] 358304 28 100.0 35 ............................ AAAGATATATTTATTTAGCTACGCTTCGCTATAGA 358241 28 100.0 36 ............................ TTGTAGGATTATACTTGCCTTGCTTTGCTATAAAGA 358177 28 100.0 37 ............................ AACAATTTATGTTCTAAAGTAGTGTCAAAATCTATAT 358112 28 100.0 38 ............................ GTAAGGGTTTTTAGTAGATGGAATATCTTATCTATAGC 358046 28 100.0 36 ............................ AAAGTGCATATATACTAGATGTATTATATTTAGTAT 357982 28 100.0 37 ............................ CAAAAAAAAGAATTTATTAAGGCTATGTTAGAACTTG 357917 28 100.0 37 ............................ TTGGCAACATTATCTGCTAAAGTATTTAAATTGTAAA 357852 28 100.0 37 ............................ TCGCTTGTCTTTGTAAAATTATACCCATTATCTAATC 357787 28 100.0 37 ............................ TCAACTTCTTTAAAAAGACCAGTTATACTATTAGTTA 357722 28 100.0 36 ............................ TTGCATGAACACTAAATGCAAGGAATGTGAGTTTTG 357658 28 100.0 37 ............................ TTCTCTCACCCAATCATGCTTAGTTCTAGAATATCTA 357593 28 100.0 38 ............................ GTAGGTATTTGTGTTCATAATACAGCTAATGATGCACC 357527 28 100.0 38 ............................ CGTCACGGCAAATCATTTACAGCTACCAATTTTGTCGA 357461 28 100.0 37 ............................ TCAATTCCACCACGCAAACTAGAAGAACCTGTCTTAT 357396 28 100.0 39 ............................ TGAGCAAGATAATTAATAGAATCATAAGTAATTTTTTGC 357329 28 100.0 37 ............................ ATATCAAAATTATCAAATGTAACGTTTGCATAACATT 357264 28 100.0 36 ............................ GTGAAAGCTTCAATCACAACAATCACCTCCAGAATT 357200 28 100.0 37 ............................ GTAGGAAGCGTTCATCTTCTACAAAAGTGTTTTCGGG 357135 28 100.0 36 ............................ TCACGAATACCTTTTACAATCGCATCGAATGGACTT 357071 28 100.0 37 ............................ GGGTAATTTTTTAATATAGCGTATATATCGTTGTTGT 357006 28 100.0 36 ............................ AATAGCAAGTACAAGAAAGCTGATGGCTGTTTACGG 356942 28 100.0 37 ............................ TTTGGTGGCTCATTCAAGATTGATAGAGTTATTCAAG 356877 28 100.0 36 ............................ AAGTTTGATACTCTACAAATTTTGTTAACTTGGTCT 356813 28 100.0 37 ............................ TCTTTTTACGCGTCTTATAATCCTGAATTGTATACAG 356748 28 100.0 36 ............................ TTTATTTATTTAAAAAGGAGCGTTTTATGGATTCTT 356684 28 100.0 37 ............................ TACAGTTTAGAGGAAATAAACAGAATATTTGAGTATT 356619 28 100.0 35 ............................ TTAGTTCAAAAACGATGGGAAAATATGGAGGAAGT 356556 28 96.4 0 .......T.................... | ========== ====== ====== ====== ============================ ======================================= ================== 29 28 99.1 37 GTTTTATCTTAACTAGTGGAATGTAAAT # Left flank : TCTACTGAGGAGGTCGCATTAGCGGAATTAGATAGATTAGAAGAAAAATGGGGAGAAAAATACTTAATAGCAGTAAGGTCTTGGAGAAATAACTGGAATGAGTTATCAACATTCTTTAAATATCCACCAGAGATTAGAAAAATAATATATACAACTAATGCAATGGAAAGTTATAATCGTCAACTGAGAAAAGTTACTAAAACTAAATCTATATTTCCGAATGATGAATCATTAATGAAGATTTTATACCTTGCTACCGTTGATATAACAAAGAAATGGACCCAATCAATACGAGGATGGGCTCAAATTTTAGCTCAACTATCAATCTTCTTCGAAGGTCGTTTAGACGACCAGTTGTTCTAAAAAATATTTAGTCTAACTCTTATTAAAGTGCAGATTATTATGTAAAATTTATCAATTAAAGAAAAATAAAGGTTGGATGTTGTATTAACCTTTCCAACCTTTAAAATAAAACTAAATTTTCTAAAGTTTACACAAAA # Right flank : ACAACTTTAATTGGGGTTAATCCGATTTTATTACATTCTTATCTTAGCACTTATATGTAAAGTTAATTATACCACATATATATGGTATAATTAATGTAGCTATAAACTATAGGTATACTTTATAGGGGTAGTTCAAATCTATACTATTGTATTATCCCAAAAGTGAGAGGTTATACTAATAAGTTTGAGTGATATAAAAATTATGGTTTTTTAAAGCCTTAATATATAAGGATTAAAATCTCATTAACCTTATAAAGCAATAAAAAAAGAAGGAGGATTTTATGTATAGTTTTATTTTGGAAGTTTTATTTATAATGGTACCGTTGGCAATAAGTCTGATTATTTATATGAAAATTGATAAAAAATATGCTATAACAAATATAATAAGTCTAAAACTAGGTATAAAAAGAGAATGGATGGCGTTTTTTTGTTTTTGTTTTACAATTTTAATTATGCTAACAATAAATATGATCAATGAGTATGTAATTAATATTCTGCCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTTAACTAGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 365278-359792 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP023671.1 Clostridium septicum strain DSM 7534 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================= ================== 365277 28 100.0 38 ............................ TTCTCTTTAGATAGTGGCATTTGCATAATGCTCAATCC 365211 28 100.0 37 ............................ TATTTTCCACAACTTGCAAGTTGTTGGCAGGGTCAGC 365146 28 100.0 38 ............................ ATTTTTAGGTGAAAACAGTTATTTTGTTACTTTTGTTA 365080 28 100.0 37 ............................ GGTGAAATGATATTTGATTCTACATCAAACTCACCAA 365015 28 100.0 37 ............................ ACCGCATATATTATAGCGTTCCATAATTGTAGCCTCC 364950 28 100.0 37 ............................ ATTATGTAGACGGGAGCTGGGATAGAGTTTTTAGCTC 364885 28 100.0 38 ............................ GCATCTAGATTTAACCCTTCTTGGATTAGCATAGTTCT 364819 28 100.0 38 ............................ GTTATTTTTATTTTCGTGTAATCATTGAAAAATGTTAA 364753 28 100.0 37 ............................ ATGTCCGCATTTGTCAACAAGTTTTTCGTTTAAAACT 364688 28 100.0 37 ............................ TCTATTATTATAGTTAGGTTTTTTAATATTTTTTTAA 364623 28 100.0 38 ............................ AAGTAGGGATTATACGTTCCGTAACCGTTCAATTTCAT 364557 28 100.0 35 ............................ AACAAAATGAAATGGATAATGATTACAGCAATTGC 364494 28 100.0 38 ............................ CTGTTGTAGGATATAAAGACATTAAACCTCTAAGCGAG 364428 28 100.0 37 ............................ CTTTGCTTCTTAATAATGATGGCTTCAAGAAAGCACC 364363 28 100.0 39 ............................ TGACACGCCCGGGTATATATAGTTATATATTATTTTCTT 364296 28 100.0 37 ............................ TCTTGATACAAAGCTTTGTAAGTGTATATTTCATTAT 364231 28 100.0 35 ............................ AAATTGTGTCGAGGGGGGTAGAGGGGGTTTCGCTC 364168 28 100.0 37 ............................ GTCTATATGACTATCTCACCATAAGAGATACACAAGG 364103 28 100.0 38 ............................ ACTTGAACTCTATAATGAGTTTGACTTTTTTCAGGTTC 364037 28 100.0 39 ............................ TGCTTACCTCCATGTATATAAGAAAAGCCGAGGTTAAAC 363970 28 100.0 37 ............................ TACATGGCAAAATAATCTCCTAGTCTAATTTTAAATT 363905 28 100.0 36 ............................ TTGAGCAATAACCACCCTCATGTATGTGGGCAAAAT 363841 28 100.0 38 ............................ CTAGTTACTTTGATTGAGGTGATATTTTATGAACGTAA 363775 28 100.0 38 ............................ ATTGACTTATCTGTTAACTGACCGTTTATTAGTGATTG 363709 28 100.0 36 ............................ TTTGCCAGCACACTTTCTTTATGTGTATTTGTATTC 363645 28 100.0 38 ............................ CTAACAACAAATTACAATATGGTTTTGACTGAACCTGA 363579 28 100.0 37 ............................ AACGCATTGTCTATTTGAAATACCAATCCAACTAAAG 363514 28 100.0 37 ............................ GCGATATCTATTCATAGTTAAATTAGAATAATATCTA 363449 28 100.0 37 ............................ TTCAGTATTGTTCAAATTACGCCATTTAGGTGCGTTT 363384 28 100.0 38 ............................ ATTTTAGAGTCAGTTGTATTTATAGACTTAATAAACTT 363318 28 100.0 38 ............................ GTGCCTAAAATAGTTATAGGTCTCTTTTCATAGTATGC 363252 28 100.0 36 ............................ ATTTGGAAGTGGTCGATGATTTAATTAAGAATGCAG 363188 28 100.0 36 ............................ TCTCTTATCCCTCTTGTAGTAGGGTTAACAAACACA 363124 28 100.0 37 ............................ TACAAAATTGGGTATGCACTAAGTTATGCACTTGCCT 363059 28 100.0 37 ............................ ATCAATGTGTTATCTATTAACACGAAAAAATAGCCTT 362994 28 100.0 36 ............................ TTCCATAATCCTTCTACAATCCACCTTCCTATCTCA 362930 28 100.0 36 ............................ TCAAAAATGAGATGCACAATAGAAAAGGTGCATTCT 362866 28 100.0 37 ............................ GGTGTAGAGTAAGGCGAACAAGTGATGTAAGCTGGAG 362801 28 100.0 37 ............................ AAGTATAATCCTACAACGGAGCTAGATAAGGCTATAA 362736 28 100.0 38 ............................ GTGCTAGAAGAATATAGCGACTGTTTATTCCATTTCGT 362670 28 100.0 37 ............................ TACAAAAAATTATGTTTACATTTAGTAATCTTGTTAC 362605 28 100.0 36 ............................ TCAAGGTTCGGTATAGTAAGTACTAAATGGTAAAGA 362541 28 100.0 35 ............................ TTTTACAAACCATAATAATCCTCCTAACCTATATA 362478 28 100.0 37 ............................ TTGAAACCTTTACAACATTTAGCTGAAGGTATTCTTG 362413 28 100.0 36 ............................ AATCCTCGAATAATTATGCTCAAATTGAGTAATACG 362349 28 100.0 36 ............................ TATAGAAAATTATGTTTACATTTAGTAATCTTGTTA 362285 28 100.0 37 ............................ TCGCCAAAACAATCAAAGCACTAGCAGACACGCCCAT 362220 28 100.0 36 ............................ CTTGGCTACCTAATAAGGTTTCCCATGCAACACCCG 362156 28 100.0 39 ............................ CTCGATAGATTATTATTAATTATATCTATTTGATTTTGC 362089 28 100.0 36 ............................ TTTTGTTGATGTTTAAATGATAGCACTTGCACTAAG 362025 28 100.0 37 ............................ ATTGCTATAGCAGTTAAAACTGGCTGTAAAACTTCAT 361960 28 100.0 36 ............................ CTATCTGCTATATTCTGTTTCGCAATATCTTCTCTC 361896 28 100.0 36 ............................ ACAAGGTCGAATTCAGCATAACCAGGACAATGAGTA 361832 28 100.0 38 ............................ CCAAATTTTGAAATGTATTGCTTAATTCTTCAGGTTCA 361766 28 100.0 37 ............................ CTATTTCTGTTATTCTTTCTTGTATTTCTATTCCCCA 361701 28 100.0 37 ............................ TGCATAAATCTCTTCATTCTCTTGTTTAAAAGTTAAA 361636 28 100.0 37 ............................ GCATCTAATTTTGCTGTATCTGATATATCAAGCTTAC 361571 28 100.0 38 ............................ TCTGAAACGCTTTTTTTATCCATTTTTACAAGAGGCTC 361505 28 100.0 39 ............................ TAGTGTTTGACGTTGATATCAGTCCCTGGAACTCTGCAC 361438 28 100.0 38 ............................ ACTGTAGCATCAAAAGTATATTTTATATCTTGTATAAT 361372 28 100.0 36 ............................ TAGCAACCGCCGAGTCCGGTAAGTGATTAAAAATCA 361308 28 100.0 38 ............................ TCAAGTTAGATGTATACTCGTCATATAATGGGATAAAC 361242 28 100.0 37 ............................ CTTTTTTTCTCTAGTATTCTTATTAGTATTCTGAAGG 361177 28 100.0 36 ............................ CTGATAAATCATACATCTTTGTTCTAAATCTAACTG 361113 28 100.0 36 ............................ TAAAAAAGAAATATCCAGGATAGTGAAGTCTGGAGG 361049 28 100.0 35 ............................ GTCTAAACCTCGATTTTTGAGGTTTTTTGTAATTT 360986 28 100.0 36 ............................ TCTTCTATGAAACTTCTTTCTTTTAAAAAAGAAGTT 360922 28 100.0 38 ............................ TGGTTCTAAATCTTTAAAAATAAAATCTATTGCAGTCA 360856 28 100.0 37 ............................ TAATCTTGATTATAGTTATTAAATCCACTTCCAAGCG 360791 28 100.0 35 ............................ AGCAAAGAAGCATCAGATGCAGCAGAAACATTAGG 360728 28 100.0 37 ............................ CGATAGGACTTCATACATCTCAAATAAATAGTATTAC 360663 28 100.0 37 ............................ CACAAAATTTATCATAATCAACACCAATATCGGATAT 360598 28 100.0 36 ............................ TTAACATTGTCAAGTTTTTCCGTTTTGTCAACAGGC 360534 28 100.0 37 ............................ TTTTAAAAATAATTTAAAATAATTCAAAATAATTAAA 360469 28 100.0 35 ............................ ATCATACAAAAATATTCCCTCTTATCTCTTTTAAG 360406 28 100.0 37 ............................ GTTGCATTAACTGAATATATAATATAATATAAAATAA 360341 28 100.0 38 ............................ TCTATAGCGTAGCGTTGCCCAAAAAAAGTGATAAATGA 360275 28 100.0 35 ............................ AGCACAGAGATGTTCTTATAGTATTATTAAAACTT 360212 28 100.0 37 ............................ GTGAATTCGTGATAGTAAGAACAAGTTAAAGTTGACT 360147 28 100.0 37 ............................ TTTAAGTAGATAAAATCAAGTTAAGTACGCTGCTCGC 360082 28 100.0 37 ............................ TAGCCTTGAATCTGTTTAACATTATGCAGAGAATATA 360017 28 100.0 38 ............................ TATTATATTAAGGGGTGCAAATTTTATTTTTAGTGCGT 359951 28 100.0 35 ............................ GGCAACATTATCATATCTAAAACATAAAGACCAGG 359888 28 100.0 36 ............................ CCCTTCTAAAATTGTAGACCCCACAAGGGGGCACAC 359824 28 96.4 0 ...........................A | GAGAG [359798] ========== ====== ====== ====== ============================ ======================================= ================== 85 28 100.0 37 GTTTTATCTTAACTAGTGGAATGTAAAT # Left flank : GAAAAATGGGGAGAAAAATACTTAATAGCAGTAAGGTCTTGGAGAAATAACTGGAATGAGTTATCAACATTCTTTAAATATCCACCAGAGATTAGAAAAATAATATATACAACTAATGCAATGGAAAGTTATAATCGTCAACTGAGAAAAGTTACTAAAACTAAATCTATATTTCCGAATGATGAATCATTAATGAAGATTTTATACCTTGCTACCGTTGATATAACAAAGAAATGGACCCAATCAATACGAGGATGGGCTCAAATTTTAGCTCAACTATCAATCTTCTTCGAAGGTCGTTTAGACGACCAGTTGTTCTAAAAAATATTTAGTCTAACTCTTATTAAAGTGCAGATTATTATGTAAAATTTATCAATTAAAGAAAAATAAAGGTTGGATGTTGTATTAACCTTTCCAACCTTTAAAATAAAACTAAATTTTCTAAAGTTTACACAAAAATATTGACAGACTCTATCGAAATATTCATTTGCTAATTCTTG # Right flank : TAGTCTGTGTAAACTTCAGAAAATGATATAATAAATTATCAATTATGGAGGGAACACAGACTATGTCATTTTCAAAGGAAGAATTAATAAAAATATTAGCAAAGGATCCAAATATTAAAACAGCTGAAGATATTCAAAATGTTTTAAAAGACTTATTTGGAGGAATGCTTCAGCAAATGCTAGAAGCCGAATTAGATAATCATCTTGGATATGAGAAACATGATTACCAAAATAAAAACACAACTAATAGCCGTAATGGCAAGAGCCGAAAAACTATGAAATCCAATCTTGGCTACTTCGACTTAGATGTTCCAAGAGATAGAGAAGGTTCTTTTGAGCCTGAAATAGTAAAAAAACATCAAACTGATGTTTCACATTTAGAAAGCTCAATAATTGGGATGTATGCTAAGGGAATGACTACAAGAGATATAGCATCACAAGTAAATGAAATATACGGAATGGACATATCACCAACATTAGTTTCTAATATAACAGATAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTTAACTAGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 3 368290-366769 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP023671.1 Clostridium septicum strain DSM 7534 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================== ================== 368289 28 100.0 37 ............................ ATCAAATCTTTTATTTTCTTTACAATGTTCACACATA 368224 28 100.0 37 ............................ AAAGTAAATATTCTTAAATCTATCCTTGTTCATACTA 368159 28 100.0 37 ............................ TGATTTAATAATACCACTTTTAATTAATATCGTCAAC 368094 28 100.0 37 ............................ ACCATAGAATAAACAACTAATTTACTGCCTTCTATTC 368029 28 100.0 37 ............................ CCTTATATGCTAAATAACCATTGTTTAGCTTTTTTCC 367964 28 100.0 37 ............................ TATCAAACTCCTATACTATATTATAACATATTATTGA 367899 28 100.0 38 ............................ TTACAGCCTTAAATATAGCCCCCGAAAGTCTAACTAGC 367833 28 100.0 38 ............................ CCCTCTTTCTCTTGATTTAGATTTGCTTCTAGTTGCTC 367767 28 100.0 37 ............................ CCTTTCCATATCGTTCCCTTTTTTAAATTGCTCCATA 367702 28 100.0 37 ............................ TTTGCTCTCTCCCGTCGATTATTATAGTTAGGTTTTT 367637 28 100.0 36 ............................ TGTAGCTTAATATATTGCCCTTCAAAGTAAGGTGCT 367573 28 100.0 37 ............................ GTGCTATACCATCTGTTACTGACTGATAAATACCTCC 367508 28 100.0 38 ............................ TTATCTAAAGAGAATGGAGAGATAGGGATACAAACAAT 367442 28 100.0 36 ............................ TACAGAGCTTAAAGACTGATAAGAAGTCGAAAGCTG 367378 28 100.0 37 ............................ TCATCATGTAGAAGTTCAATAAGTGGATCTAGTATAA 367313 28 100.0 37 ............................ ACAAATTAAAAAGAGTAGATTAATTTAAAACCTACTC 367248 28 100.0 37 ............................ TTATCTAATCCTAAAAGTTTCATAAAAAATTCTCCTT 367183 28 100.0 37 ............................ AAGGTAGCAATTTGATAGCCAAAGGTAGTAATAAAAA 367118 28 100.0 36 ............................ ATAGGAATGATTACTATAGGCTTTAGAACAACGGAA 367054 28 100.0 36 ............................ CTTAGTTCAACATTTTTGTTTAAGTTGGTGTTTATA 366990 28 100.0 36 ............................ ATTCATAGCACTCATCTGATCATCAAAAGTAACAGG 366926 28 100.0 37 ............................ GCAAACAAAGAATGCAAACAGAGTATGGGCTGGAACT 366861 28 100.0 37 ............................ CGAGATAGCTAAAACTTTTACTATAGACAAAGAACTA 366796 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ====================================== ================== 24 28 100.0 37 GTTTTATCTTAACTAGTGGAATGTAAAT # Left flank : ATTAAACATTTAATAAATGATGAAAAATATAAACCTTTAAAGGCATGGTGGTAAAATGTTTGTTATAATAACTTATGATGTTAACGAAAAAAGAGTAAATAGAGTGAGAAAAATATTAAAAAAATATGTAACATGGACGCAAAATTCAGTTTTTGAAGGAGAAATAACAGAAGGAAAATTAACTAAATGCTTAGCAGAGGTTAAGAAAAATTTAGTTTCTGCAGAAGATTCATTATATATTTATAGAGTTTCATATAGCAAAAATATTACTAAAGATGTAGTTGGAGTAGAAAAAAATTTAGATGAGTTATTTATATAGTTGCAGTAAGCGAATTTTTAACTTTAACCCGTGGAATACTTGAAAATAGAGAGATACACAGGTATTTATATTAAACAATAAATACCTTACTGATGGTTTACTGCAAAAGTATATGTTATAATAAAATAAAATATACTTGAAACATAGTAAAATCAATATGTTTTATATCATATTTTTTGGG # Right flank : TTTCGCATCTATCGAAAGAGAGTGTAAAATAGTCTGTGTAAACTTCAGAAAATGATATAATAAATTATCAATTATGGAGGGAACACAGACTATGTCATTTTCAAAGAAAGAATTAATAAAAATATTAGCAAAGGATCCAAATATTAAAACAGCTGAAGATATTCAAAATGTTTTAAAAGACTTATTTGGAGGAATGCTTCAGCAAATGCTGGAAGCCGAATTAGATAATCATCTTGGATATGAGAAACATGATTACCAAAATAAAAACACAACTAATAGCCGTAATGGCAAGAGCCGAAAAACTATGAAATCCAATCTTGGCTACTTCGACTTAGATGTTCCAAGAGATAGAGAAGGTTCTTTTGAGCCTGAAATAGTAAAAAAACATCAAACTGATGTTTCACATTTAGAAAGCTCAATAATTGGGATGTATGCTAAGGGAATGACTACAAGAGATATAGCATCACAAGTAAATGAAATATACGGAATGGACATATCAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTTAACTAGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [70.0-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //