Array 1 273750-275105 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHOHK010000001.1 Bacteroides cellulosilyticus strain MSK.18.87 NODE_1_length_366830_cov_144.671, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 273750 47 93.6 30 .....A...............T....T.................... TGCTTGGCAGTTCTTCGATGATCGATTGCT C [273764] 273828 47 100.0 30 ............................................... TTTGCGGTCGCCGCTTGCGCTGCAGTTCAC 273905 47 100.0 30 ............................................... ACTTTTTCGTACAGATATGCGCAACGCAAT 273982 47 100.0 30 ............................................... TGCCCCTATATTATTACTCTAATGTGGCTT 274059 47 100.0 30 ............................................... CTGTGCGTCTGAGGGGATTTCGTCACGCCA 274136 47 100.0 30 ............................................... AGACCGGAGCAACACCAGGAAGTTAAGCCC 274213 47 100.0 30 ............................................... CACGTTCAGGTGATGTTCCCGAAGAGTTTT 274290 47 100.0 30 ............................................... TGTTCACGTTGGACGCTTGTAATACAGATA 274367 47 100.0 30 ............................................... CTGATGTCAAGTATGAGAAGGGCGGATTGG 274444 47 100.0 30 ............................................... CTGGACGAGCTAGATAACTACAAGTTCATA 274521 47 100.0 30 ............................................... CAAGGCAGAACAGGGCAACATTAAGGATGT 274598 47 100.0 30 ............................................... TGATTTCATGGATTATTCGCAGATCAACGA 274675 47 100.0 30 ............................................... CATATATGCGTTGCTCCAATAACGGAAAAT 274752 47 100.0 29 ............................................... CGGCAAAGGATTTGGCGTTTGCGGAAAGC 274828 47 100.0 30 ............................................... TGGAGCGACCAAAAGAATATGAAGCGCACA 274905 47 100.0 30 ............................................... ATACTTTGCTTTGAACACCACAACGAATGG 274982 47 100.0 30 ............................................... TGAGTTGCGTTTCACGAAAGCCAACCCACG 275059 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 18 47 99.6 30 GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATAGGAAACAGT # Left flank : AATATCTTCGAATATACTTTCGACGAGCATGATGAAACGGTAGCTTATTCTCTGTCTATTCCTTTCGTCTCTACGTTTGTTTTTGCAGCGGTAATGAAGCATCAGGAGGCTCCGGGTACTACGTTCAAAAAGCACATGGCTATTGCTAAGGGTTTGCTGAGTGAGGATGATTACTTGCTTCAGGAAATTCTCTTTAATCCGCGCACTCCCTCGCAAGTGGAAAATATTCGTCTGGAGCTGAAGAATTTGCTGGAAATTATCAGTACGAAGGATGCGGAAGGGATGAAGCAGTATCTGACGAAGATTAGGGAAAAGATAAAATAGAATAAATAGGTGAGATTAAGGGATTGAAGAGAGGGGAGGTACGGAAAAGGAAATGGGGCTTCTCTCTTCAATTCGTTAATAAAGAGAGGTGATGATATTTAGGATTAGGTAGGGGCATACTTATTTCTAAAATTATTGAAAATAGTCAAATATTGGCAGGAATGATATGAAATTCT # Right flank : TACAACCCGCATTACAAACTGATATACAATTGGTTACAAACTATTTTTGAATTACAAAAACGATACTGTTTTCAATTAAGAATCCCGCATTTAAGCGGGATTTCTTTTTCTAGAAAAGCTCTAATTGCTGACCGGGAGTATTTATATCCAAAGATTTTTTCCCATAAAATAACTCTATATTTCCAAATTGCTTATCTGTAATACACATAATTCCAACCTGCCCATGCTCCGGTAAGAAAGATTTAACTCTTTTTATATGAACTTCTGCATTCTCACTACTAGCACAATGGCGAACATAAATAGAAAACTGAAACATAGTAAAGCCATCTTTCTGCAGATTCTTCTTAAAATCTACATATGCTTTCTTATCCTTCTTTGTTTCAGTAGGCAAATCAAATAATACAAGTACCCACATAATACGATATTCACTAAATCGGTTCATCTCACATTTCCGGATATAATATTCTACGCAATTCACCACTAAAGCATTTATACAGAGA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATAGGAAACAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.10,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //