Array 1 125394-128715 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUFT01000001.1 Clostridium sp. AF24-2LB AF24-2LB.Scaf1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 125394 28 100.0 33 ............................ TGGCTTCTGATGATTCTCAGAGGTATAAAATGC 125455 28 100.0 33 ............................ TGTAGTCATTAAGACCATTGAATTTGATAGTAG 125516 28 100.0 33 ............................ CTTAAAACTTGTTTGTGAAGAAGACGGAATGAG 125577 28 100.0 33 ............................ CTATTGGAATGAATATCTCACCACCAAAAGTAT 125638 28 100.0 33 ............................ TTGATAATATTCTTGAGTATGAGAAATGGTTCT 125699 28 100.0 33 ............................ TATCCTCTATATTCTGCAAAGCTTTTTGTGTTA 125760 28 100.0 33 ............................ TGGTTATCCTCGTCCTCTGTGAGACTGTCCAGA 125821 28 100.0 33 ............................ CAAGAAGATGTTTCGTTTGTTCGTAACAACAAT 125882 28 100.0 33 ............................ CTGATTCCAAGTTGGAGGGTTGCCTCCATAGTT 125943 28 100.0 33 ............................ CCATCTCTTTGTCCTCGTCTGACAGATATAATG 126004 28 100.0 33 ............................ CTGCTCTGTTGCCTTGTCAGTGTTCCAGTCATT 126065 28 100.0 33 ............................ CGTAAAACAATCTGGGTCACTGGTACAAATTTA 126126 28 100.0 33 ............................ TTGTTGTTCAGATTTATTTCCAATATCTAATAA 126187 28 100.0 33 ............................ CAGCGTTTACCAAGGCAGCGCTATGGGAGCAAT 126248 28 100.0 33 ............................ CGTTGGAAATCGTTAGAATCCATGTAAACCAGC 126309 28 100.0 33 ............................ TATGCCTGTAACTTGCCGCGATAATGTTGTATA 126370 28 100.0 33 ............................ CGAACGCGTCATGCTATTCCAGACACGCTGTTG 126431 28 100.0 33 ............................ CCAGGTGCAGTGGGACAATGACGCTTTTTTATG 126492 28 100.0 33 ............................ CTAGCCGATTGTGTCGGGCGTTTAAAATCATAC 126553 28 100.0 33 ............................ TTGAATTGTACGAACCGGATGGTTGGATAAACA 126614 28 100.0 33 ............................ TCGGTAGCAGCAACGTTCCCATCAGCAATTTTG 126675 28 100.0 33 ............................ CGTATCCGGAGACTATACTATTAATGCTGGAGA 126736 28 100.0 33 ............................ TAAAATCATGTCGGGCGTGGCGTTTAATGAAAA 126797 28 100.0 33 ............................ TTCGTCCGCAATGGATTTTTTAACAAATGTTTC 126858 28 100.0 33 ............................ TAGGTATGAGCGGATTGTATTCTTCGGTACAGC 126919 28 100.0 33 ............................ AGCGTCCCTGTCGTATAAGACCCCGACGACCTG 126980 28 100.0 34 ............................ TTTTATTATCTGATGAAAATTACTGGATGGTAAT 127042 28 100.0 33 ............................ CCATATCTACATGATATGATACATATAAAGTTG 127103 28 100.0 33 ............................ CTATCAGTATCAGCAAATGCGAGCAAATTGAGG 127164 28 100.0 33 ............................ CGAACATCCTCAAACAACGTTACGGGACATTTG 127225 28 100.0 33 ............................ CTGTCTTCCTTGCCGCCACCTGCGAAGATAACA 127286 28 100.0 33 ............................ TGTATGAGGCATTGCGGAAAGTCCTTGGAAATG 127347 28 100.0 33 ............................ TACGGATGCTTCGGCGTAATCTTAAATTTAAGA 127408 28 100.0 33 ............................ TGGTTCTCTGACCGCTATGGAGCTGACAGGGTG 127469 28 100.0 33 ............................ CTGAGTAACCGCTTTCTCCGCCGCCACCAACCT 127530 28 100.0 33 ............................ CCGGCAGATGCTTATCCCAAGAGGAGAAGAGAA 127591 28 100.0 33 ............................ CCGGCAGATGCTTATCCCAAGAGGAGAAGAGAA 127652 28 100.0 33 ............................ TAGGGCGCTTGTTGTGTTTCACACCGCAAACGT 127713 28 100.0 33 ............................ CTGTTGGGGTAAAGCTGGCAAGTAGAAGGGAGG 127774 28 100.0 33 ............................ CGTCACACCGAACCAGCTTAACATTACTGACGG 127835 28 100.0 33 ............................ CCTCCGGCACTTTTGCCCCCTCAAATTTGACGG 127896 28 100.0 33 ............................ CTATTGCATTTAAAATGTCAATAGATTCATGAT 127957 28 100.0 33 ............................ TTGAGAAGCGCCCCGAAATCATCGGACTTAAGG 128018 28 100.0 33 ............................ TTTCATCGGAGAAAAGAATTACATAGTAACCAC 128079 28 100.0 33 ............................ TAATAATTCAGCTGAATTACTTATTGGATAACA 128140 28 100.0 33 ............................ CCTTATCTTTAACCTGTCCTGATTCAATGGCTT 128201 28 100.0 33 ............................ TCAAGGTATCCGGAGCAGTTTGACCTAGTGGGA 128262 28 100.0 33 ............................ TCACATCATCGCGAGTTATAATCCGTAGCGCAT 128323 28 100.0 33 ............................ CGGTCGCGGAGGATGTTGGTTGGAAACGGGTTG 128384 28 100.0 33 ............................ TCTGGAGGAAGAGGCAGCAAAGAGGGCGCTGGA 128445 28 100.0 33 ............................ TCATCTGGCCGAGATGGAAAAGTACAGCTGGAA 128506 28 100.0 32 ............................ TCAACCCCTGCGCCAGGGAATCGGTTCTGCCA 128566 28 100.0 33 ............................ TACCGGTACAATCAGCGGAACCGGAAGTCTGCC 128627 28 100.0 33 ............................ CGAAAAACCGGAATGGTTGACGATGGATCAGAT 128688 28 85.7 0 ............T...........T.TT | ========== ====== ====== ====== ============================ ================================== ================== 55 28 99.7 33 GTATTCCCCGCGCAAGCGGGGGTGATCC # Left flank : TCATCAGATGAGATTATTGAGTTGGCGGCGATCAGAATCATTAACCACAAAATAGCAGACCAATTGGAGATTCTAGTGAAAGCAGAAAAAGGTGTTCCAAAAGTAATTACTGAACTTACGGGGATTACAGAGGAGATTCTTGAGGAAAAGGGGATGGTTCTTTCTTCAGCGATAGAGAAGTTTTGTGAATTTATTGGACAAAGTACAATAGTGGGTCATAACATCGCATTTGATCGCAGCTTTTTAAAGGAAGCTTGTCGAAAGACCAATCGTATGAATCTAAAAAATCCGGCAAAAGATACATTAGATCTTGCGAGAAGACGAATCGATGATATTGATGATTATAAGCTGCATGCACTAGCAGACTATTTCCAGATAAAAGTTGAGGAGGAACATAGGGCATTAAGTGATTGCATCACAACATTTCAGGTGTTTGAGAAACTAAATGAAATTTAGAGATGGAGATCGGGAAAAGGTTGTAAATAAGGGATTTTTTTAGT # Right flank : TTCCTAAAATCTAAAGTTTGGGAAGATAAGAACAACCTTATGATTTCAACATATGAAGCCATAAGGTTGTTTTTTTCGTATAGAAAACTTCACTGCCGCATCTTGAAGGTCACCAGAATTTGTGGGAAATGATAGGTGGTTGTTTGCTCAGTTTTTTGGAATATAGATGATTTTGTCACAGGCGTAAAGTTCTTCTCCCTCTCTGTTTCGCATTTCATATCCGATATATTTACAATTCCCATCCAACTGACTATAATAAAGAATGTCCGTTTGCCTGCAAAGGCGCGGAACCATATCCATCTGCATCAGGGCGATATGACAGAAAAATGAATTTAAAAGAATGGAAGAAACAACAATGGATGTAATTGGAAAATTTGGAAATAGGGTGAGCAGCCAGGCGCTTAAGGATCCGGAAAAAGCGCGTCGGCTGCTTCTTGCGGGATACCGCCTGCAGGAAAAGAAGCTTCAGTTTTTGCCGGATCGGGGGCTGCCGTCGTCGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCGCGCAAGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCGCAGGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //