Array 1 419766-417694 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADAJC010000027.1 Enterobacter roggenkampii strain Res13-Abat-PEA24-P5-01-A seq_tig30, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 419765 28 100.0 32 ............................ CTGCTTGACGCTCTGCACATCCTGGTCAATCT 419705 28 100.0 32 ............................ GTGTCCTGGACATCATCGCCACGATGACAAAC 419645 28 100.0 33 ............................ CACCAAATCCCGTATTAATTCCACATAATCTAT 419584 28 100.0 32 ............................ TGAAACAGTATCGCGTATGTCATAACCCGTAT 419524 28 100.0 32 ............................ TGCTGGCGCAGACAACTGCGGAATTAAATAAT 419464 28 100.0 32 ............................ TCTCTGATTTCACCGCTCAAAGTGAAAAAGCA 419404 28 100.0 32 ............................ GTGGCGGCTTCCGAATTTAACGGGGTCTTAAC 419344 28 100.0 32 ............................ TTGCCTCTGCTAATGCTGTTCGTGCTAATTAT 419284 28 100.0 32 ............................ GGCATCAGCAATTACGCCATGGTAGTCATCAG 419224 28 100.0 32 ............................ TTGCTCAACCAGATTAAGGGCGAGCTGGCTGG 419164 28 100.0 33 ............................ TTCATCCAACAGGCGCAGGATAAGCTCAACCAG 419103 28 100.0 32 ............................ GCCAGCGGTCGGATAATTGAGCTGGCCAGACT 419043 28 100.0 32 ............................ AACCAGAACCAATACCACCAAGATCCACCAGT 418983 28 100.0 32 ............................ AACCAGAACCAATACCACCAAGATCCACCAGT 418923 28 100.0 32 ............................ AGTTCCACCTCCGTAACAGCTGATGAATTGAT 418863 28 100.0 33 ............................ ACAAAGAAGGGGTGTTGTGCTGGAAGCGATCAA 418802 28 100.0 32 ............................ GCGTGGCCATCCACGGATCATTCAAAGAGAAC 418742 28 100.0 32 ............................ TCAGGCATATTACAAATATGCACTCTATCTAT 418682 28 100.0 32 ............................ ATTAGAATATTTCAAACGAGGGAATTTCCCCG 418622 28 100.0 32 ............................ GCCTCCAGCTCCGTGACGTTGTGCTCACGCAT 418562 28 100.0 32 ............................ GTCATCAGGGCGTTCGCTGTGTCCTGCAATGC 418502 28 100.0 32 ............................ GAAATAGGGTCGGCCACGGCGGCCTGTCGCGC 418442 28 100.0 32 ............................ CGGAAGTTGATCAGTATCTTGCAAGCGTGGGT 418382 28 100.0 32 ............................ CACGCTATCGAGGCGATCCATGGGTACCGGTC 418322 28 100.0 32 ............................ AGCTTGTGGCGCAGCATTACCCACAATATGCC 418262 28 100.0 32 ............................ TGGGTAACTCCTCCGAAGCAGGGATCCGCCAG 418202 28 100.0 32 ............................ ATCTTGATCAATGCCTCAGTAAAAACTACTGT 418142 28 100.0 32 ............................ CAAACTCCGCAATTTGTTTTTCTGTCAATGGG 418082 28 100.0 33 ............................ ATAACATTAAGAGATGTTCCGGCAGCAGTACCG 418021 28 100.0 32 ............................ ACCAGCCGCGCTTCACCAGCATCGGCTCCAGC 417961 28 100.0 32 ............................ GTACTCGATACCCTCAAAACCGAATTTAAGCT 417901 28 96.4 32 ....T....................... GTATTCGATACCCTCAAAACCGAATTTAAGCT 417841 28 96.4 32 ....T....................... GCTGGAATCAAAGTGATGGAGTGAGTATAAGG 417781 28 85.7 31 A..........C...C......C..... ATAGAAAATAAGGCCTAACAGTCCTCGGACC C [417756] 417721 28 75.0 0 ........T..A....A....CCT...G | ========== ====== ====== ====== ============================ ================================= ================== 35 28 98.7 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AACGGGCCACGCGTTCGCTCTCGTCGGGCGTTAACGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCGTTGATACCCGTGACACGCAAAATGTCCGCTTTCGACATGGACGTCCACTCGTGGATGTTGTCGAGCACACTGACGGGTAATCCCTGATTGAGAAATTCAATCAACCGCATACCTCGGTTGGCGGGTAAACCGGCGTAACGCCAAAGTGCGTTATCAGCAGGTTTCTGTGCGGGGATCCATGTTCTCATGTCACCTCCTGAGTAATGTCATTTGTCATGGGTAAGTATAGCCATTTGTCATGGTGGATGGAATCGGTGTTTTTGTGAGGGGGATTGATGCGAAGAAAGGTGTTTTGACCCTAATTTTTGGCGTTTGTGTAATTTATTGATTTTAAATGAGTATTCTTGGTGGGTAAAAAAGAGGGTTAGAGAGGGTTTTTTAGCTTTTTTTGTATGCAAATCAGAAGGGTGTGGGGATATTATTTCA # Right flank : CTGGAACGAACGGCTAATTAATTGTTCAAATAATCAACTGCGACACAAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTGAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACGGAAAGCGCATTCGTAAAGGGGATACAACA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 430314-429262 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADAJC010000027.1 Enterobacter roggenkampii strain Res13-Abat-PEA24-P5-01-A seq_tig30, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 430313 28 100.0 32 ............................ TACCGTATCAAGCACCAGCGCACCGTCGGCAT 430253 28 100.0 32 ............................ TGAATATTGTTCACGCGCGTCCTGATGCCGCT 430193 28 100.0 32 ............................ GATAAATCTGCTGAACAATTCGGGGTTCACGC 430133 28 100.0 32 ............................ TCGTTAAGCAGCTGCATGGCGTTCGGCATGTC 430073 28 100.0 32 ............................ GAAAAACTTCCAGCCTGAGAACGTCTACAACA 430013 28 100.0 32 ............................ GAGCAGAAGCTACGCGCTAAAGCCCTTGCGCA 429953 28 100.0 32 ............................ ATTGTCGCAGGCTTTTCTTTTGAGTCGGCTGC 429893 28 100.0 32 ............................ AGACTACGGATGCGCCAAAGAAATCCGAAGAC 429833 28 100.0 32 ............................ GTCACTCCCCGAACTGATTACACAAATCCGCA 429773 28 100.0 33 ............................ AGGGAACTGGCGTAAACGTCCAGACGTCGGTGT 429712 28 96.4 32 ..G......................... GTCTGGGTTCGCGCCTGACCGCCGTAGCTAAG 429652 28 100.0 33 ............................ GACAATTTTGCGACTGTAGACGTCCTGCCAGAA 429591 28 100.0 32 ............................ TTAACTATTGCACTCTGCAGCTGCGTCTGTTG 429531 28 100.0 34 ............................ GCCGCACGAAAGCGAAGCTGGCCAGCCTGCAAAA 429469 28 96.4 32 ...............T............ TGGCGCCTCCGTGCCGGTGGCGCTCCGCGCTT 429409 28 100.0 32 ............................ CGCACTTATGGCGAGTGGTAAAGATTGAAAGG 429349 28 89.3 32 .........T.....A....G....... AATGAGCAACATCGACAAACAGGCGCTACACA 429289 28 78.6 0 ...........C.........AC.ACT. | ========== ====== ====== ====== ============================ ================================== ================== 18 28 97.8 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CACTCCCACAAACGCAGCCCGTATGTCGTTGCCTCGGGGCTTATCTGGAAGAGGTAAAATCCGGCCTCACAGAATCCATGCGTGATTTTCAGATAGTGGAATTTGAGGACGAATCGGAACCACCGCAACAAAAGGAATGGCTGCTGGAAGATACAAAAACAAAGTGTGACTACTGTCGGGCGTTAAACCATGTACTAATGGTGTCGCAGTTTGACCGCGATATGCTGCCGCACCTGACGGGGTTGCTGCATGACATTACGCATTCAATGGCCGCGGATGTCGTTGCGCCTCAACGTGCAGAAACGATAGTTCACATTATTTCCTGAATGTAATTCGTAGTGTCGGGGAAAGACTACTGACGCCACTGGCTTGACCTTTTTTTGATGATTACGTAACCTTTTGATTTATATAATGCGAATTTACGTTCCAGAAAAAAGGGTTTTATGCGGGAAAGTTGATTATTTTCTTTTCTAACAATAAGATGGCGTGGTTTCCTTTCA # Right flank : AAAACAACTCTCTAAAACATTCAGCTTACCTATTTAAAACTTAATACGATCAAACCCACATTCTTTATTTTCCGCAATAAATAAAAAATTCATTCACATACCAATTATATTCCAATGAATATATTGTTCGTAAAAATAATGCATTAAATGGAAAAGTGATTTTTCACTTTATTATCACGGTAATTACTCTTCATTTGATACCCGTCACATTTGTTTTCATCTTATCTTCGATAACATACCGCGCATTCAACACCTTGAAATAAAAGCCCTTGCTATGTCCGTAAACAGCATCACTCCAACAGACTTAAAAACCATCCTGCATTCAAAACGCGCCAATATTTATTACCTGGAAAAATGTCGCATCCAGGTGAATGGTGGGCGTGTTGAATATGTCACCCAGGAAGGCAAGGAGTCGTTTTACTGGAATATTCCCATCGCGAATACCACGGCAGTGATGCTGGGAATGGGAACATCCGTTACACAAATGGCAATGCGGGAGT # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 445624-445175 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADAJC010000027.1 Enterobacter roggenkampii strain Res13-Abat-PEA24-P5-01-A seq_tig30, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 445623 28 100.0 32 ............................ ATGTTGTTTTGTGCCGTCTGCCCGAACGTGTT 445563 28 100.0 32 ............................ TTACAACGTGATCGCATGGCGCAGAGTGACCG 445503 28 100.0 33 ............................ TAAACATGCGGCCATCGTCGTCAGCGCGCTTTA 445442 28 100.0 32 ............................ AGTCCATCCCGCACAACCCACCGCGCCACGTT 445382 28 100.0 32 ............................ CCGACGCAGCAACGCCTGGAACCCTGGCTGAG 445322 28 100.0 32 ............................ GGTCGCTGGAAGACACAACCTGTTCAGCTGGC 445262 28 100.0 32 ............................ TTAAGAGGCGTATTGGCCACCCGGTCGCAGAG 445202 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 8 28 100.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ATGGGTTGCATAAGCTGTTTGGTGGGGTGGGCTTTATCAGCGGTATGCTGGTGGAGAAAGGGCTGCCGGGGTTTATTGCCTACGGCGTGTTGATTGGCGAAGTGGTGGCGCCGATCCTGATTATTGTCGGGCTCTTTACGCGCCCGGCCGCGCTGGTGCTGGCGTTTACGATGATCGTGGCGTGGCTGATGGTGGGATTGGATGAGACATTCGCGCTCGACAAGGTCGGGGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTATCGGCTCGCTGGCGGTGGCGTTTTTAGGGGCAGGGCGGTTTGCGCTGGGGAAAACACCTGCGTGGCGGTAGGGGTTGGAATCTGTTCCGAGGGAAGGGGTCTACGGACCCTTTTTTATTGGTGAGTTTTAAGTTGTTGATTTCACAACGGTGAATTGTTGGTGGGGAAAAAAGGGTTTACGGAGAATTTTAGGGGGATTTCTTTATATCACAAGAAGATAGGTGTAGATTGTTCCA # Right flank : GCACTTCAGCCGGGTAAGCGTCGGTGGTTAGGGTCCAATGCCGAACAGGCAGTAGGCACAACGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACGAACGAGCGTTTATTGTTTATGCAAGGACCAGATCGCCCTGCGGATGGCACGAGCATGCCAGCACGTAACCCTCGGCAATCTCCGCGTCGGACAGCGTCATGGTGCTGGTGACGGTATACTCCCCGGAAACCACCTTTGTTTTACAGCAGCCGCACACCCCGGCACGGCAGGCCGCCGCCACCGGCACGTTGTTGCTTTCCAGCGCCTCCAGCAGCGTCGTGCCCACGCGGCCAAAGAAGGTCTGCGCAGGCTGCAGTTTGGTGAACTGAATCCCGCTGGTTGCCGCTTCCGCCACCGGCGTGAAGAACTGCTCTTTGAAGAAGCGGGTCACGCCGAGCGCTTTCACCTCTTTCTCGACGATATCCATGTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [40.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //