Array 1 86330-83841 **** Predicted by CRISPRDetect 2.4 *** >NZ_PREH01000005.1 Acinetobacter indicus strain IHIT31230 NODE_5_length_134883_cov_86.7157, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 86329 28 100.0 32 ............................ TGTTCAAGGACAATGTGAGCCAGCTCCGTATC 86269 28 100.0 32 ............................ TATTAAAGTCATTACTCTTTGAGTTGCCAAAA 86209 28 100.0 32 ............................ ACCGGCAAAACATAACAATGCTTTACAGCCAA 86149 28 100.0 32 ............................ ATACGGGTAGCATTGGCAGTTGCATCAATAAC 86089 28 100.0 32 ............................ AACCGATACAGGCTCAGTGATTAAAACTGGAA 86029 28 100.0 32 ............................ GCCCAAAGTAGCACCTAGACCATAAGTACGAG 85969 28 100.0 33 ............................ CTGATGATCGAAATAGGCAATATGATTAATCAC 85908 28 100.0 32 ............................ ATTACAGCCTTGCTCAATTGGAGGCTCGATTT 85848 28 100.0 32 ............................ TGATTCACCGGAACGCTTATAGCAATCATACA 85788 28 100.0 32 ............................ TATTCAATCGTATATTGATCTATACGGCGTTT 85728 28 100.0 32 ............................ CTCGTAAAAAATAACGGTAGCACTTTGGCTAC 85668 28 100.0 32 ............................ GCAGACGTGCTATTGCCACCTGAGAATAATCC 85608 28 100.0 32 ............................ GTTTCGATGCCATTTGCCTGTTTTGATGTTGC 85548 28 100.0 32 ............................ CCAAAGTTTAAAATGACGTTATGCGCATCAAC 85488 28 100.0 32 ............................ TTGAAAACAAGTCTGCAGCTCAGGATGGCGGC 85428 28 100.0 32 ............................ ATTGATTGGCTCTAACTTCGCAATTTCAGTAT 85368 28 100.0 32 ............................ ATCTGAAATAAAAACCGTTGAACCAACGTTGT 85308 28 100.0 32 ............................ ATTTTATGTTTTCTCAGATGGCGTAAATTATG 85248 28 100.0 32 ............................ TTGTGGCCAAAGACAAGCCATATATTGAGTCA 85188 28 100.0 32 ............................ AGTTTTCAATAAATGTGCTGCCCAAGATGCCC 85128 28 100.0 32 ............................ TGTATACGTGTTCTCAACTGTTACTTCCACAG 85068 28 100.0 32 ............................ CATACGTTCCAAACGCTGTTCTGATGCAGATT 85008 28 100.0 32 ............................ ACCCCATTATCTTCAACATTAACAAATTTATT 84948 28 100.0 32 ............................ AGTCCTTTGTGAGCTCCAGTGGAGTGGGGAAT 84888 28 100.0 32 ............................ ACTGACTACCTGATGACGATCATGTCTGAAGC 84828 28 100.0 32 ............................ TCCCATTTAGCAAGTTGGGCATTGTAATCATC 84768 28 100.0 32 ............................ ACTCGGCAACTTGCTCAAATAGCAGGTGAACA 84708 28 100.0 32 ............................ ATGGGGTGCAAACCTTGTTGGTGCGGGTATCG 84648 28 100.0 32 ............................ TTTCAATTCAAGTTTAGCAACGGCAGTTTGTG 84588 28 100.0 32 ............................ TACGAAGATTACGACACCACCAGAGAGATGAC 84528 28 100.0 32 ............................ AATATATACATATCTTCGCTTTTTGCCATGGT 84468 28 100.0 32 ............................ TCTAACGGGAGGTCGTTCATCAAGCAGTACAT 84408 28 100.0 32 ............................ ACTAAGCAATCTCTGAATGATTGGCTCTTTTG 84348 28 100.0 32 ............................ CGCACCATCAACTTTCATACCCTTCACCTGGA 84288 28 100.0 32 ............................ AAACGGACAAAAGGTCAAGAAAGGCGATAAAA 84228 28 100.0 32 ............................ GCACGGCTGTATTGTTTTGGAGAGGTAATGAA 84168 28 100.0 32 ............................ ATACAGCTACACCCGTAAATGGGTTGGTACGA 84108 28 100.0 32 ............................ ATACAGCTACACCCGTAAATGGGTTGGTACGA 84048 28 96.4 32 ............G............... AGTAGCGTAATTATGGAACGAGTTAAAGCACA 83988 28 96.4 32 ............G............... TTTGATCGTTTCAATAGAAACCACCTCAAATG 83928 28 96.4 32 ............G............... GGCATGGGGATGGGCAAGACTATTTCGACATT 83868 28 96.4 0 ........................A... | ========== ====== ====== ====== ============================ ================================= ================== 42 28 99.7 32 GTTCACTGCCATATAGGCAGCTTAGAAA # Left flank : ACCGGGATTTAAAAGCAGAAGGTTTTTATGTCGATGATCTGGATATCCAGCAGGCGTTATTGGGTTTTGAACAGAAAATACCGCATTTGACTCAAGTCGGAGATGTGTTGCTGGCAGAAGCGGCAATGACCAAGCTGCTTTATAAAATCGCGGCAAGCCGTACCGGATTAAAAAGCTTTAGCCGTAATCCGGAGCAGGGTGATTTGGCAAATGATTTTCTCAATCATGGCAATTATTTGGCCTATGGATTAGCTGCGACCACACTATGGGTGCTGGGTATTCCACATGGTTTTGCGGTTATGCACGGTAAAACCCGCCGTGGAGCCTTGGTGTTTGATGTGGCAGATTTGGTGAAAGATGCCGTGGTGCTGCCTTATGCATTTATTTGTGCGAAGGAGCGGGCAACTGAGCAGGAGTTTAGACAACAGGTTCTGCAGAAATTTATCGAGCATAAGTGCAGCTTAGAAAATTCTGGTGCTTGAGAGAAATCAACATCTTTA # Right flank : TATTTAAAATGATTCATTCAGAAAGGGGGCTAGAAGAATTTATGCTGAAAATTTATGGTGTGAAGCAAAATTAGTTTAAGAGAGTTCCTTTTTTAACAAATACTTAGTATCTTATCTCCACCATAAATGGGGGAAATATAATGAAAAAATTAATTTTAGCTTTAGCTATCGGGGTTATTTCTACTGCTGCAGTTGCTGAAAAACCATTAACTTTTAGTAAAGGATCGCCTGCTGTAATCGGTACCAGTCCAGATTATGTACATCATGAAAGCAGCTCTCAAATAAATAATACAAATCAATTTTCTATTGCGCTTGGCTATGCCGGATCAAAGTTAGGCTCTGATGAATTTCTCGGAACCGAATCTTTTGATGGCTTATTTGTGAATGCTGCTTATTAGGTACATCCTAAAGCCAGCCTTTGGGCAGAGTATATGTTCCAAAGTTCAGATATTGACTACAATCAATTTGCATTCGGTTATAAATACAAATTTCTGGAAAGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //