Array 1 230788-232274 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALUF01000027.1 Streptococcus agalactiae GB00888 ctg7180000005223, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 230788 36 100.0 30 .................................... TTTTTTTGAATATATAAAAAGTCCCTGCAA 230854 36 100.0 30 .................................... AAAGGAGTATAACATGGAAAATCCAATTAC 230920 36 100.0 30 .................................... ACTAGCGACATGATGTTTGCAGTAACGGCT 230986 36 100.0 30 .................................... AATGGTGGCTAACATCAGTGACGAATCGTT 231052 36 100.0 30 .................................... TAATATTTTTACTAAAGTGTTAAATACAAA 231118 36 100.0 30 .................................... AGGCAATATAAGAGATATTAGAGAAAGCTT 231184 36 100.0 30 .................................... CAAATATCTAGCGACTGGCTCATATTCATC 231250 36 100.0 30 .................................... CCTGAAATTGGCTGATATTTTTGATGAGTT 231316 36 100.0 30 .................................... TCCCAAATTTGTAACTCCCAAGGATAGTAG 231382 36 100.0 29 .................................... CCGATTATTTCCTACATAATACGCACGTT 231447 36 100.0 30 .................................... TTTGATAGTGGTGTGGTTGTTATCAGGCAT 231513 36 100.0 30 .................................... TCTACCCACCTCCCAAGCTGAAATGGCTGT 231579 36 100.0 30 .................................... GGTGAGGGTGCGTAGGATAGCTGACAAACT 231645 36 100.0 30 .................................... TTATCATGATGAGGAACAATCAATTGATCA 231711 36 100.0 30 .................................... TTCCTTAAAAACAAAAACAGCACCCACATT 231777 36 100.0 30 .................................... TATTATCAAAATATTCTTTGGCGAATTCAT 231843 36 100.0 30 .................................... CATTACAGTCTTTGAGCAAGGTTATATGCT 231909 36 100.0 30 .................................... AGCTATTGCTCAAAAAAGAGTAACAGCTCA 231975 36 100.0 30 .................................... TTTTTCTATTTTATTTATTTCAATAGCATC 232041 36 100.0 30 .................................... CAGGAGATCTATAACACTGAGTTCATTCTA 232107 36 100.0 30 .................................... AAAACAATTGAAGAGCTGGAGAATTACACT 232173 36 100.0 30 .................................... TTGGAAAAAACACGAAAGTGATATTACTTT 232239 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 23 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CATCTTCTTTTGACCTAACAAAAGGATATGTGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //