Array 1 259356-262373 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADVHV010000003.1 Citrobacter braakii strain CB00072 CB00072_contig00003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 259356 29 100.0 32 ............................. TTCCTGAGAGTGCTTAATTGCCACAATTCACC 259417 29 100.0 32 ............................. CCTCCATGTTCAACCAATCCATGTTGTTGTTA 259478 29 100.0 32 ............................. AACCTTCCCCGACAATTCCGATTCACGCTGAA 259539 29 100.0 32 ............................. AAACTGGTAGAGCACCACTACCCGATCACGAT 259600 29 100.0 32 ............................. CCATTCAGGCATCACACGCCTGATGGAGGACC 259661 29 100.0 32 ............................. GCGGTGCGGCATGAAACCAACCTACGAAGAAC 259722 29 100.0 32 ............................. TCTGCAATCGGAATCGCTGAGCCGTGGCTACC 259783 29 100.0 32 ............................. GATGCACGCCAGTTAGTAAAAACTCTGAACGA 259844 29 100.0 32 ............................. GTGACGAGCTACTTAAACAAATCGAGGAGGAA 259905 29 100.0 32 ............................. CGCCGCCCGCTACTGGTATTTTGTCCCTCTAT 259966 29 100.0 32 ............................. GGGGGCGATTTGACGCAGCTCGGCGCAAACCT 260027 29 100.0 32 ............................. CCCTTTCCGCAATAAAATCCGAAAACGTTTGT 260088 29 100.0 32 ............................. ACGTCTGGTTTTGGTTCGGTTGAGGACCGCGC 260149 29 100.0 32 ............................. AACAGCAGAACCGACAACCAGAGATTTGACAA 260210 29 100.0 32 ............................. CTGCATGAATAGTATAAACATTATTGTTAACG 260271 29 100.0 32 ............................. CCTCCCCCTTTCCCTCTCCGTTGCATCGAGGA 260332 29 100.0 32 ............................. GTATTTCAGACTACGAAGGCAGCAGCCGGGAC 260393 29 96.6 32 ........A.................... TTTATACCCTTAAATATTTCACCATCAATATC 260454 29 100.0 32 ............................. CGAAACCTTATGGTAACGTGAGAGTTAAATCA 260515 29 100.0 32 ............................. CCTCCGAAAGTGCAGAGGCTGTATGTTTATCA 260576 29 100.0 32 ............................. GGAGGGGTGGGAAAATCATTATCGAACCTCGG 260637 29 96.6 32 ..........................T.. TGTGGGTTTGATTATCTTCCATCATTTCAGGC 260698 29 100.0 32 ............................. ATATACGCAAGCCATAACTTGATCAAGAAATA 260759 29 100.0 32 ............................. TAATTGAAAGCGCGGGAATTGTTTTAGACCCA 260820 29 100.0 32 ............................. GAGTCCAGTTTGTTGACTACTGGAGCTGAGGG 260881 29 100.0 32 ............................. CGTTTTCAGGTTTTTATGTCCTGTAACCTGCG 260942 29 100.0 32 ............................. AGATCGCTAGCGTTAGGGCGTTGGCGAATCGT 261003 29 100.0 32 ............................. TATTTTCCGATTAATCGGATGACCGTCTTTAT 261064 29 100.0 32 ............................. AATATTGTTCATACTGATTTTGTATTGGAAGC 261125 29 100.0 32 ............................. CTGGCGACGAGGTAGAGCTTTACGAGTTCTCC 261186 29 100.0 32 ............................. TACCAAACCAGCGAACCTGAGAGCCTGTGGAG 261247 29 100.0 32 ............................. AACAATCCCCAACGCTGACGGCCGCCAGCAGC 261308 29 100.0 32 ............................. CGCTATGAAGGCGTAGTTCCACCAGAATATGT 261369 29 100.0 32 ............................. CGCTGCCGTTCCGTAACACAGGGTGGAAACTC 261430 29 100.0 32 ............................. TGCGGAGACCCGCTCCCCGGTGATCTCGCTGG 261491 29 100.0 32 ............................. AAATGAACGGCGCAATTCTGGATTTTCGCGGT 261552 29 100.0 32 ............................. CTTTTGCTCAAGGTATCCGAGATAGTCCATGG 261613 29 100.0 32 ............................. TGGGATGATAGCCTGCAAACAAATGAAGCAAA 261674 29 100.0 32 ............................. GTATACCGTCTGGCGTGGCCGACGTATTTGGA 261735 29 100.0 32 ............................. GGCTCTAAACACAATCCGCTTATTTTGCAGAT 261796 29 100.0 32 ............................. GAAAAATATCAAGAGGGAATGAAATTGCGTAT 261857 29 100.0 32 ............................. ACGACAGGCAGGTTGTAAACGTGCCAGATGGC 261918 29 100.0 32 ............................. TATTACGCAACTATTATTCCAATTATTCCACC 261979 29 100.0 32 ............................. ATAAAAAAAGCCCCGAGGGTTAGTCGGGGCGA 262040 29 96.6 32 ................T............ TTCGCATTGAGAAAGCACTCATTCTCGCAGAG 262101 29 100.0 32 ............................. TATCAGGTTATCTATCGGGGGCAGAGCGTGAA 262162 29 100.0 32 ............................. GTCGGTTTTTTCATGGTGTCACGGGGGTGATA 262223 29 100.0 32 ............................. AATCATATCCGCCGGCTTAATGCCCTTCTTGA 262284 29 100.0 32 ............................. CGGAGGACGCGGCCAAAATTGCTCGTAATAAT 262345 29 93.1 0 .........................T..A | ========== ====== ====== ====== ============================= ================================ ================== 50 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : ATTGATTGAAGAAGTGCTGGCTGCCGGGGAGATTGAAATCCCTAAACCTTTTGAAGATGCCCAGCCTCCGGCGATCCCTGAGCCTGTTTCATTGGGCGATGCAGGGCACAGGGGGTAGCACCATGAGTATGCTTGTTGTTGTCACCGAAAATGTTCCTGCTCGTTTGCGCGGTCGTCTGGCTGTCTGGTTATTAGAAGTTCGCGCAGGTGTCTACGTTGGCGATACCTCACGTAAGGTGCGAGAAATGATCTGGCATCAGGTCACGACCCTGGCAGACGAAGGTAATGTTGTCATGGCCTGGGCGGTGAATAATGAGTCTGGTTTTGATTTTCAAACATGGGGTGAAAACAGGCGCATGGCGGTGGAACTGGATGGATTAAGGTTAGTGTCATTCCATCCTTCATAAAATCAATGGGTTATAGTTCTTTAATAATGTGGAAAATTTGGTGAATTTTTTCTACGGCTATAACCCCTTTTAGATCAGTGATATAGTTTTAGA # Right flank : ACTTTGAAAGCAGAAATATTATGGGGCTGGATGGGTTACGAGGATTTTCCCGCCTTTGCCAGTTCTTTTACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCTGCGTTGTCGAAGACCTCTGCGTCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGCGCCCGGTCGCGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //