Array 1 57745-58373 **** Predicted by CRISPRDetect 2.4 *** >NZ_FBBQ01000028.1 Campylobacter coli isolate W17C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 57745 36 100.0 30 .................................... AAATAATCTTTAATAATTTCGGCGTTATCA 57811 36 100.0 30 .................................... TGGCAACTTGTTATGCTACCGCCGTGTCCA 57877 36 100.0 30 .................................... TCATCTAATCGTTTTGCTTTTGGTGCAGAA 57943 36 100.0 30 .................................... AAAAAAATATTCAGGGTTTGAAAACACATT 58009 36 100.0 29 .................................... AGTGTTTTTAAAATACTCTAATATTTTAT 58074 36 100.0 30 .................................... TTTAGATTGGTTTTAATTATGGCTTCAAGT 58140 36 100.0 30 .................................... AAAATTATTTCTTTTACAAAATTATTAATT 58206 36 100.0 30 .................................... TGCTTTCGTAAATATATTCTTTAACATATT 58272 36 100.0 30 .................................... AAAGTTTAAGTTCTGTTTCAATATATTTGG 58338 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 10 36 100.0 30 GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT # Left flank : TCAATCAAGTCCTAATATTTTTAAATAGAAATAAAATGATGTTAAAATATTTTGTTTCTATATTAAATCAAGGAGAAAAACAATGAAACATTTTATTTTTAGCGGATTAATTGGTTTAGGTGCTTTGGCTTTTTTAGTAGGTTGTGGAGATGAGGCAAAAACAAGCGATTATTATAAAGCGCACTTAGATGAGGCAAAAGCTAGAGTTGCAGAATGTAAAAAAATGGAGAAAATGAATGAAACTCAACAAAGGGATTGCTCTAATGCAAAATGGGCAGTTGAAACAAATGGACTTGAGAATGCGGGTAGTTCTTGGGGTAAATCAAACCCAGACGCTCTTAAATGGAAATAAACTAGCGATTATTTTTTTAATTTTTCTTGCTCCAAATTTAGCTTTTGGGGTTAAAAGTGCGGAAGGCGTTTTAAGCATAATACGCAATGGGCTTTTATCTTGAACGCCCCTTATTAAAACCGCTTGTTTGTAGATATTTTGAATTTTT # Right flank : TGGACTTTGAACAAATAAAGAAAAATAGAGCTTTTTGTATACAAAAATGTATAAAAATATGCTATCATTTTAAAAGAGAAATTTAAAAAGAGACTAAAATAAGTGGTTTTCGGTTAGCCACGCAGGGTTACAATCCCTTTAAAACCGTTAAAATTCAAACAAACTAGCTTGTCTAATTTTATTAGACTTAGTTTTGTTTTCTTTGTATATCTTGTCATTGCTGTATTTAAAATCTTGTGTTTTTTCATCATACTCAAAAAGAACTAAATTTTTATCATCATTCATTTTTTCATTAAAAGAAACTCCGCCTAAAAGTATTTGCATATTGTCAAATTGTTTTTCAGTTATGGTTAATACTCTTATATTGCCACAAGGGGGTAAAATTCTTTCTACGGATTTGATTGCTGTTTTAGCCGAAGTCATTCCTTTGCAAATTTTAACATATACGCTAAATTGCATCACAAAAAAGCCAAGTTTTACAAGCGAAACTCTAAATTTAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.56%AT] # Reference repeat match prediction: F [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [66.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //