Array 1 388733-392088 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTLB01000003.1 Mangrovitalea sediminis strain M11-4 Scaffold2_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================================================================================================================ ================== 388733 28 100.0 33 ............................ TGCCGTTGATTTCTTCCAGATCGATGAAAGAGG 388794 28 100.0 33 ............................ CCGAGGTCCCGCGCTTCGCAGCAAGCGCCTGGA 388855 28 100.0 33 ............................ TGACCCGCTGGCTACGGATTATTACCGCCCAAC 388916 28 100.0 33 ............................ TTTGTCCGCAAGTATGTACGGATTACATTTCGA 388977 28 100.0 33 ............................ CGCTTTATCTGATCGATATGTTGGTCTGATTGG 389038 28 100.0 33 ............................ CCAGGCGTATATTGGCTGAAATCGTTTGAAATT 389099 28 100.0 33 ............................ CGTCGGTGTTGTAGTTGTCCACCAGCTGGATCT 389160 28 100.0 33 ............................ TCCCACATGCACCTCGCGGGATTTCTCGGCATT 389221 28 100.0 33 ............................ TTTCACGAAGGCACTTGAACCAGGCAGTAGATT 389282 28 100.0 33 ............................ GTGGGAAAGACGCTGACTATTGATTCTGCGGAT 389343 28 100.0 33 ............................ TGCCGCTCATGCACTGGCGGTCCATATAACTGC 389404 28 100.0 33 ............................ TCTGGCTGCGCAAGGCGTCATACTCGACGGCAT 389465 28 100.0 33 ............................ TCTTGGATTTAGCGGATCGGCGAACCTGATTGC 389526 28 100.0 33 ............................ CGAGTTGAGGATTGAAACGATGTTTAGATTCTG 389587 28 100.0 33 ............................ CTCGCGGAGAGATTGCATAGCGTTATACCTTGT 389648 28 100.0 33 ............................ TATGTCCCTCCCTTTCTCAGTGGATCATCATCG 389709 28 100.0 33 ............................ CGCCTCACAGCGGCCCCCACGGCGCGAGACGCG 389770 28 100.0 33 ............................ TGGGGCACGCCTTGATCGCTAACGTAACGATGA 389831 28 100.0 33 ............................ CGGATGAAGCGCTATGACTAGCTTCGTCGTCGT 389892 28 100.0 33 ............................ CCATCAGACTGGCGCTCGCTCTGCTCTTCTTCG 389953 28 100.0 33 ............................ CCTGTTTACGCGGCGCATCGACGAAAAGACCCA 390014 28 100.0 33 ............................ TATAGATTATTAGGAATCAAAAAGCCTTCAACT 390075 28 100.0 33 ............................ TACACTCCCTGCATTTAGAGTCGATACAGGCCC 390136 28 100.0 33 ............................ TACACTCCCTGCATTTAGAGTCGATACAGGCCC 390197 28 100.0 33 ............................ TCTCCGACGCCATCGCTAAGGCGCATGCGCAGG 390258 28 100.0 33 ............................ TAGTTCGGTGTAAATGGTGTCGGTCATGTTTTT 390319 28 100.0 33 ............................ TACCCTGGCTCTGTCCATGTGGAATTTTGCAGC 390380 28 100.0 33 ............................ TCCCCTTGGCCTTGGTCAGATCCTGCTGGAGTC 390441 28 100.0 33 ............................ CTGCATGGAGTTGTCGACATAGAGGGTCAGCAT 390502 28 100.0 33 ............................ CCCCCAGCAGCCAGTGAGCGGGAGGAGTGATGA 390563 28 100.0 33 ............................ CCGCTCCACCTCTGCCTCAAGCTCGGCTATGTG 390624 28 100.0 33 ............................ TCGATGCAGAGCGGACGGCGCCTGCCGTGGCAG 390685 28 100.0 33 ............................ TGTATCTAAACAGCGCAGAGGCCTGGATCGATG 390746 28 100.0 33 ............................ CGATTGTTCGATGCAGTCAGATGGCGGGTATTG 390807 28 100.0 33 ............................ CTCGATATGCGGATTCCGGAAATCAGGCCATCG 390868 28 100.0 33 ............................ CGCCTGTACGGCCTACCAGGGCGCCCAGCAAAT 390929 28 100.0 33 ............................ CTTCGAGTAGATGGAGCCTGGAGTGGATTCAAA 390990 28 100.0 33 ............................ CAAAGCAATGGGCGGTAAACGTCCTAATCTCGG 391051 28 100.0 33 ............................ TGATGAGCCGTTGGTAATCGCCGCCGAGAACGC 391112 28 100.0 33 ............................ CATAGTCCCACAAAAATCCCATATTGAGAGTCC 391173 28 100.0 33 ............................ CGCTTTTCTGATCGTCTTCGGTGCAGGCGTCGA 391234 28 100.0 33 ............................ TGCAGACTGGCCATTGATAGCGCTGTCCGTCTC 391295 28 100.0 33 ............................ CGACCATTGGTGCGCTCACTGTGATTGAAGGAG 391356 28 100.0 33 ............................ TGGGGTTGTTAAATCTTGCGAGTTACCTCTTGA 391417 28 100.0 33 ............................ TGTACAACCTACTTTCAACTGATCAAAACAAAC 391478 28 100.0 33 ............................ CGATTACACCGATGGATTGTGCAAGGATGGATA 391539 28 100.0 33 ............................ TGTTTTACGTAACAAAGGATCAGGAAGTATTGT 391600 28 100.0 33 ............................ TGGTACTACTCCAGCGGGTGCGAAATGGAACCC 391661 28 100.0 33 ............................ TCTGCGTCCCATTCAGGGTCGCATAAAGGATCG 391722 28 100.0 33 ............................ TAAAGCCCGATATTGTCCGAAGTGATCTAGTGT 391783 28 100.0 33 ............................ CATGTTTGAGCAAATACAGAAGCCGTTGATGTT 391844 28 100.0 33 ............................ TCTCGGCATGTCAGACGTGCCGGTTTTCCAGTG 391905 28 92.9 128 ............A.T............. CCAGTAACCGCAAGGCAAAAATAAGTCCATCGCAGATGAGCTTGAAAGCCATCAATTTACAATAGGCTTACTGGCAAATCGCGCACGGAGAACGTGGGGTGCCTGCCTCTTCCCCCTCTCCCCAACCC 392061 27 75.0 0 C...C.....G.....A....A.-...A | G [392067] ========== ====== ====== ====== ============================ ================================================================================================================================ ================== 54 28 99.4 35 GTCTTCCCCACGGGCGTGGGGGTGTTTC # Left flank : TTTACAAGGAAAACCTGTGTATTGATCTTGCTTTTTCGCTGACGCGGGATATGGCAGGACGTTATGACAAACATAAGGTGTCTGCCGCATTTCGTCAGCGAGTGATCGACATGGATTTACTGGCTCTGATCGCGGATGACATCGCTGAAATGCTGGGGACAAGCCATGCTCGTCGTCGTCGCAAATGATTTGCCGCCAGCCGTTCGAGGGCGAATGAAACTCTGGTTTGTCGAGCCAAAGCCCAACGTTTTTGTGTCCGGGGTTAAAGATTCAGTTGCCGTCTACGTGGTTGATTACCTTTACAAACATTGCCCGCCGGAGTCGGGCATTGTCATATTCCGTTCCTTGCCAAGCCCACCTGGTTATGAAATCAGAACCATCGGACCAACAAAAAAGACGTTGACGACAATCAGCGGACTGCAGTTGGTTATCGAAACCCTTAACCACCATTAATCCCAATATGTTGCATGTTAGGGGGTGATCTTTAACAATTTGTTGGT # Right flank : AACCCCAACGCCGACACTTGGCGCCAAGTGGTCTTTCTCCCCTTGCCTATGGCCGGAGAGGGGGCTCGGAAACGGTGTGCGGTCGACCGGTCTGCAATACATCATTCCAATAAGCACTTCACGGTTAGCTGGAAAAGCGGGCGGCCCCTTGCAGAGACTGAATCCGGCCTTCCCGTTTAAATGGGATAAGCCTCTTTTATTGAGCGTCCCTCAATGCACCGCATACGCCTTAGCCTTCCGAATCACCGACTTGCCATAGGTCGGTGCCGCAATGGTCCTTAGCAGGGCGTGGTTCACCAGGTTGGGGAGCACGGGCAGTGGCCGGTAGATGTCGACGATCAGCACGACGCGGGGCTCGCTGCTGTGGTTGATCACTTCGTGCGGCCAGAAATCGTCGAACAGCACGCCTTCACCTTCCTTCCAGACATAGGGCTGATCGGCCACCACGATACTGGGTGGGTTTTCCCGCGGTACCTTGATGCCAAGGTGGTAACGAAGAT # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.14, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGGGCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //