Array 1 626751-626483 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI783110.1 Vibrio parahaemolyticus EKP-008 vpEKP008.contig.0, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 626750 28 100.0 32 ............................ TTGAGGTAATTTGATGTTATGAACCGCTTTCA 626690 28 96.4 32 ............T............... TTTTTTCCAAGAACGATTGGAACGACGTTTAG 626630 28 100.0 32 ............................ AATCTGAAAACCTCTTGCTAAACCAGACATTT 626570 28 96.4 32 ...........T................ GGGATTCGATGAAGCTTGCATCAAAAGCAATT 626510 28 96.4 0 ...........T................ | ========== ====== ====== ====== ============================ ================================ ================== 5 28 97.8 32 GTTAACTGCCACACAGGCAGCTTAGAAA # Left flank : CGAACGATGTGACTTACGTTAGCTTTACTCGGAAACAAGTTAAATCACCTGAGAGAATTGAACGCGATATGCAGAAAAAAGCTGAGCTTTGGGCGACTGAATCTGGCAGGTCTCTACAAGAGTGTCTTGTGGAGCTGGAAAAGACTAAGCCGACCTCGCTCTGTTCATTACCGTTTATCTATTTACATAGTCAACAGACCAAACAACGTTCACCCGATAAGAGCAGTAGATTCCCGTTGTTTATTGAGATGAATGACATCGGAATTAAGCAAGAAGGGCAGTTTGATTGTTATGGACTGAATGCCAAACTTAATCAACAAGGCAGTCTGGGAACTGTCCCACAATTTTAACCAACAAAGGGTAAGTTTTTACCCTTTATTTTTGCTCTTTTAAAATAGGCTTAAAATACATAGAGTTACAATTGATGGTGTTTAACAAGGTAGAAACATGATTTTTATCTTAACTATCTGTTGTAACTTTCTTTTATTGATTTATTCTAT # Right flank : GATCACAGTTTCATCAGCGAGTAGAAGAGCAGCAATTGGAGCTGGATTAAACAAAGGTCCCTTTTAAAGAGCTCACACAAATTCACCTTCTTTAGAAGGTGGTTATATACATAATACATGAGTCTGAATTTATGGTAAGTTTAACTCGCTTAGATCTGTTACAAATAGTAAAGTGTTAATTACTCGTAATGTTGACTCGTCTGGTTTCATAGCAAAAGCGCGTTTGTATGATGTTGCGGCTAAGTAGGTTTTGCCCTCAACTTCAGCGATTTTGCCAGCGATGATGTTACTGAACCAAGACTCTCGTATGTTTACAGCTTTTGTTAATAGAGTTTTAGTGTTGCTCAAGTCATCTCTATCGAAGGAACAGACCGCAAGAGCTTCGTAATATATAGGAGCATGGAGCTCATCTCTTATACTCAACAAACTATCATACATCTCCTTTAGCTCGTTGTCTGGAATTGCGAACGGCTGGATTGAGTTAAGAATTTTAGCGGAAA # Questionable array : NO Score: 5.87 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAACTGCCACACAGGCAGCTTAGAAA # Alternate repeat : GTTAACTGCCATACAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCACACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-1] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //