Array 1 47425-47054 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJVK010000008.1 Anoxybacillus flavithermus strain WS5496 8_63078_130.386, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 47424 30 100.0 38 .............................. AGGGACGAGCTGCAATGACTGTCACTTCTCCGTCCTGG 47356 30 100.0 39 .............................. TCAGACTCCAGCCGATCAACCGATCCAACAGGTTGAACA 47287 30 100.0 34 .............................. CGTCAACAATTTTTTTCTCCGTGATCGCTACAAA 47223 30 96.7 40 ...........G.................. ACAATACGAGCAGCACGATATTTACCAGATTTCACAAGAG 47153 30 96.7 40 G............................. CTCGATAAGTTGCCTGATGTTTGGAGGCGTCTACCAATTT 47083 30 96.7 0 G............................. | ========== ====== ====== ====== ============================== ======================================== ================== 6 30 98.4 38 ATTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : TATTGTTTGGCTTTTTTGAAACATATGTGAAATTATCAGACGAAGAAGAACGAAGACTGCGAAGCGAGGTGAATGAAATGGAGACGAAAGAAAAAGAACAAGTGATGGAGTTGATTATTTCGTATGAACAAAAGGCGTTGGAAAAGGGAAGAGAAGAAGGGATAGAACAAGGAATCAAACAAGGAATCAAACAAGGGATGAAGCACCTTGTACAAACGATGGCCAAAAAAGGGATGAGTGTAGAAGATATCGCAAACATCACAGACCTTGCGGAAGATGAAGTGCGTGAGTTGTTAGAAAAGGAATAAGTAATTTGCGCATAATTTCACAACCGTCGTCGACCTCCAATCTTGCAAAAACCCCAGGGGATCGACGACAATTTGTTTTTTGCAACTTTTTTAGACGTATCAACGCATCAAGACGATTGACAGAATTTTCGAATGTATGTATAATGACATTGTATAGCTTTTCCAAGTATTGATTTATCAGCACTTTTTGGG # Right flank : ACCTTTGTAAAAATTCTTCAATTACTTGAGCTTTTTCGTTTGGTTTGTATCGTACCTACAAGAACCAGTATGTTAGGGTCTGGATTTTTTTGTATATACCATTTTACTTTTTCTTTAACATTTGCTATAATATAAGGTAGAGAACATCTTTCTTTCCGATTATGGTAAAGTGAGATGTTTTTTTCGTGGAAATATTGATTTCACAAAGAAATGGAGGGATTTCTGATGAAGAAATACGCCATTGTGTATTGTGAACATCAATTTGGTTCCATGGATGGAAAAACAGCGAATGGGCTTGTGCGCGATTCAGGGCTGTATGAGATCGTTGCAGTCATTGATTCGACAAAAGCTGGTCAAGATGCCGGAGAGGTGCTTGATCAAAAGAAAAATGGCATTCCGATTTGTAAAAACCTTCAAGATGCAATAGCCTCCGCAAAAGAAAAACCGAACTACTTCATCTTAGGAATTGCTCCAGCGAACGCTTTTCTCAAAAAAGAAGA # Questionable array : NO Score: 9.18 # Score Detail : 1:0, 2:3, 3:3, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 1847-2343 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJVK010000022.1 Anoxybacillus flavithermus strain WS5496 22_37892_102.832, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1847 36 100.0 30 .................................... AGGTGAGATGTAGATGCGGAAGTTGACGGA 1913 36 100.0 30 .................................... TCGAACTGGTTTTTGAGAACGGGAAAGTGA 1979 36 100.0 30 .................................... TTGACGCTTGCTGGAGGAACAACAGGGACG 2045 36 100.0 30 .................................... GTGAGGGAGGTAGATGAGTAACTTAAATGA 2111 36 100.0 29 .................................... CTCGCTCTTTGGGAAAATTTCATTCGCTT 2176 36 100.0 30 .................................... AGATTACGTTTACACGGGACTGGTCGATGT 2242 36 100.0 30 .................................... TAATAAGCACGTATACACGCCTTTTTCTCG 2308 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 8 36 100.0 30 GTCATAGTTCCCCTGAGGTTATTGCTGTGGTATGAT # Left flank : TCTTACGTTTGGGACGATTGATGAAGCGATTCAAATGATCAACGATTACGAAAAGCCGCTTGCGCTTTATTTGTTTTCAGAAGATCGCGATGTGCAACAACAAGTATTACAACAAGTTCGTTTCGGCGGTGGTTGTATAAACGATACGGTTGTACACGTTGCCAATCCTCATTTGCCCTTCGGTGGTGTTGGACAAAGCGGCATCGGTACATACCATGGAAAAGCAAGCTTTGATGCATTTACTCATTACAAAAGCGTGCTCAAACAGACGACGAAATTTGATATCCCGTTGCGTTACCCAAACTTTCCACATGCGCTCAAATGGGTGCGGAAGTTATTGAGATGAAAAAAGGCTGATCCAAAGTACGGATTTGTATTATCCCCTACAGGTAGCCAACAAAAAAGTGGACATTTGTTATGGTGTTCTTAAGAGTCTACCTGGAAGGGGTTTTTATGACCAAATGTAAATTATCAATTTATCCTTGAATAAGACACCTAAG # Right flank : TACGTGCATCAAAAAGCCTGTAATATGAACGATTACAGGCTTTTTGATCGTTTTAAAAAAACGTGAGAAGGGGAGAAGAGTTATCCTTCATCCGTTTTTTTAAAAAAGTGACAGTTGCGTTGTTGTAATTGTTTTTTCCTTGGTAGTAGGTTCTCCTAAGAGAAATTGCATTTTTGCATATTGTTTTTCCGTTACGATCATCGCCCGCACTGATCCTTTCGGTGGCAAGTTTCTTTTCAGCCTATTAAGATGTTTATCAGCAGATTCATGCCCATTGCAAATCCGACTATATACGGAAAACTGTAACATATCATATCCTTCGTTCAATAAAAATGTACGAAATTGTCTGTAGTGCCGTTTCTCCCGATTAGTGACGACAGGTAAGTCAAAAAACACAAGTAATCTCATAAACTTACTCATAGGTGTGTATTTGAATAGGAAGAAGTTCCGGCAATTTTAAAAACGAAGGTTTTTCGTTTCGACTAGCTGTTACGAAGCTC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATAGTTCCCCTGAGGTTATTGCTGTGGTATGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 11571-11403 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJVK010000034.1 Anoxybacillus flavithermus strain WS5496 34_24116_184.24, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 11570 30 96.7 40 A............................. CGGGGAACAGACGGAGCGGTGACGTTTCCGCTTCATTATC 11500 30 100.0 38 .............................. AAGCTCGTCACAACTCGGTCATTTCTCCGAATATCGAC 11432 30 83.3 0 .................A....T.AA...A | ========== ====== ====== ====== ============================== ======================================== ================== 3 30 93.3 40 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : AGAAGCGATCGATGCAACAAAGCGCCCGCTCGTAATCGGAGGTGTATTCGTACTTATGCTTGCATCGATCATTTTCTCTCACCGCGCCAACACATATTTGCGCAAATTAGACAATGAACAGTAAATTCCCCTGTTTTCGTACAAAGAAAAAACATGTAAAATAAAAGAAAATGGGTAAAGGGGGAATAAACGATGATGTGGATGATTACAGGTCTAGTCATTACAGCTGTCATCGGTTTTGTTATTATCGCGGAAGTGAACGCCGAAGCATAAAACAGTCTCTAAACAGGAGACTGTTTTTAATAAAATTTATTTGTGATAAACTTCACAACTGTCGTCGACCTCCAATCATGCAAAAACCCCGGGGGATCGACGACAGCTTGTATTTTGTCACTCTTTCAGTTGTATCAACGGATATAGACTATTGACTGAATTTTCAGATGTATGTATAATGATATTGTATAGCTTTTCCATGTGTTGATTTATCAACATTTTTTTGG # Right flank : GCTGTTCCGAGCAACACTTCGGAACAGCTTTTTTGTTGTTATGATTTCCAAAGACCTTTCTTTTGTAAACGTGCTTTTCGTTCGGCTATACATCAGTGTATGAACATTTGTTATAATGTATTTACACGATTATTTCCTTTATTGACAATGATAGATAGATAATCCTTTTTCACTTTTATTTTTTTAGATATTTAAAAACGTGATAGTGAATTTTGTCGAATTTATTCACACAAACGTTATATAATAGTAGTAAAATAAAGGAAAGATAGAAGCTGCAGGAGGTAACACCATGGATTCCATTCAATTTCAAGATAAAGTGTCGTTTATATGGGCGAATGCAGATTTGTTGCGCGGAGATTATAAGCAATCGGAATATGGAAAAGTGATTCTACCGTTAACGGTGATTCGGCGTATTGATGCGGTGCTAGAACCGACGAAGGAAGCGGTTCTTTCGCAATTGGAAGAATTAAAAGCGATGGGAATGACGATTGAAGACGGGG # Questionable array : NO Score: 6.83 # Score Detail : 1:0, 2:3, 3:3, 4:0.66, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.52%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.77 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 13064-12697 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJVK010000040.1 Anoxybacillus flavithermus strain WS5496 40_16947_120.9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 13063 30 100.0 39 .............................. TACCTTTTTGCTGACGAAAGACAGCAGGAACTCACACAG 12994 30 100.0 36 .............................. GTGATTGAACCGTCTTGGATTTTTGCACTTGTAATG 12928 30 100.0 37 .............................. AGCGATAAAGTGTTTCCATATGATGACCTGCCATCGG 12861 30 100.0 39 .............................. TCGGCATAGAACGTGCTTTCTTCCCCTTGAGGCTCTGGC 12792 30 100.0 36 .............................. TTGTTCGGTGTCATAGAGTATAGTTTTCCATCATAT 12726 30 83.3 0 G........................TCTC. | ========== ====== ====== ====== ============================== ======================================= ================== 6 30 97.2 38 ATTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : TATTGTTTGGCTTTTTTGAAACATATGTGAAATTATCAGACGAAGAAGAACGAAGACTGCGAAGCGAGGTGAATGAAATGGAGACGAAAGAAAAAGAACAAGTGATGGAGTTGATTATTTCGTATGAACAAAAGGCGTTGGAAAAGGGAAGAGAAGAAGGGATAGAACAAGGAATCAAACAAGGAATCAAACAAGGGATGAAGCACCTTGTACAAACGATGGCCAAAAAAGGGATGAGTGTAGAAGATATCGCAAACATCACAGACCTTGCGGAAGATGAAGTGCGTGAGTTGTTAGAAAAGGAATAAGTAATTTGCGCATAATTTCACAACCGTCGTCGACCTCCAATCTTGCAAAAACCCCAGGGGATCGACGACAATTTGTTTTTTGCAACTTTTTTAGACGTATCAACGCATCAAGACGATTGACAGAATTTTCGAATGTATGTATAATGACATTGTATAGCTTTTCCAAGTATTGATTTATCAGCACTTTTTGGG # Right flank : CTCCCTTCAAACGGTGCCAGGCACTGTTCGTAAAGATTCTGCCCGTAGTTGCAATCTTTCTTTTTCTCCTGTAAATACACGAAAGTAGGTGGCATATAAAAATGGAAATGAGTAAGTTTATACTTCATGGCGATATATTGATTATGAAAGTAAAGATTGATGGTGTTGATTATACATTTAGCATTAGGTGGAAAGCACCGAAGAAACCTTATGATGAAACTTGGGAACTTGTATCATATGCGAAAAATTCGACTGGTGAAAAAGATTTAAGTGAAGAACAAATTAGGACGTTTATGGATACAGTTAATCCTAAAATGAATTGGAATATAGCAGATTTTCAAAAGTAAACTTCTTGAACTAACGGGTGTTTAGTTTAGTAAAAGATAAAAAGAATATACATATTATACATGACTAATATGTACGTTCCTTTATTTTTTAAGGCTTTTTATAATTTAAGTCTTGATAAGCAATGGGTTCTTTTTTATTTGCTAAATTATCAA # Questionable array : NO Score: 9.12 # Score Detail : 1:0, 2:3, 3:3, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.52%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.68 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //