Array 1 16551-16322 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHOT01000024.1 Lapidilactobacillus gannanensis strain 143-1 contig24, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 16550 32 100.0 33 ................................ GTGCTAAGAATGCTGATTTGGTCCAAATGGCTG 16485 32 100.0 34 ................................ ACAGTTCTGCCAACGGCTATTACGAACTCGCAAA 16419 32 100.0 35 ................................ TTCTACGGCAGTGGCTCCCAACCGTACCGCCAAGC 16352 31 75.0 0 ......T........AA.A.A......-..CG | ========== ====== ====== ====== ================================ =================================== ================== 4 32 93.8 34 GTCGCTCCTTATATAGGAGCGTGAATTGAAAT # Left flank : AAATTGTCCGTTATGATTGCAAACAAAAAGCGTTAATCCATTGAAGGATTAGCGCTTTTTTACTTAGTGCCGCTGGCAGGAGTCGAACCTGTACACCCGTGAGGATACAGCGACCTGAACGCTGCGCGTCTGCCAATTCCGCCACAGCGGCAACAACAAGTATTATTTTAACAGATATCTTGGAAAAAGAAAGGTATTGATGAATTTTATTTTTAAAATCGCGTTAATTTTTCCTAAACCGACGCTAAATTATTCAGAATGTTTGTCAATTGTTGCTAAATAGCTTATGCTTATTAAGTCGTATTAGTTGTTGCTATTGCGCGGATTGAAATGTAAATACAGTGTAGTGTTTTTTAAAAGAGCAGCTGACATATATTGTCAGCTGCCTTTTTAGAAGCAAGCAAATGTGGTTACTGGTCGATTTAATGCTAGACCGTATTCCGGACGATAACTTTGGTAAGCTGAATACAACAAACGGCATTATCGGTCGCTCACCTCTC # Right flank : CGTTAGAATTCTCTATGACAGCTTCATAATCGAACCTAGTATGGAATGAGGCAGACCCACGCATTGAATCAATGTGTTGTTGTCACCAGAAACAAGGGGGAGGAGTTATTTTGTTCCCGCTGTAGTAAGCAATCCTTTTTTTGCAGGAGTGGGTAATTTCGAGATAGTTAGTTAAGCACAAAGCACTAATTATGTTCTAGAGCCCGTTCTGCTTTGCGACTTTCTATGTTAGAATCAGAGTTATGTAGTTAATCAAGGAGTGTGCTATTATGGCAGATAAAATCGCGCTTATTTATGCGAGTAAGTCGGGACGTAATGAGAAAGTTGCTCAATATCTTGGTAAACAATTTCAACAGCTTGATCAGCCAGTTGAAATAGCTGAAATGATGACTTTTCCAGTAGAAAAATTGGCTGATTTTGCGGGAGTTGTGGTGGTTAGTTATACTTACTATGAAGGCCAACTACCAGATGAAGCAGTTGCCTTCTTTGATGATTTAGAG # Questionable array : NO Score: 8.55 # Score Detail : 1:0, 2:3, 3:3, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTTATATAGGAGCGTGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.38%AT] # Reference repeat match prediction: R [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.80,-3.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //