Array 1 1235-307 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKQS01000010.1 Acinetobacter towneri strain 5-2Ac02 Scaffold45.1_new, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1234 28 100.0 32 ............................ TTTAACCCAAGGCGTATCACTTTTAAGCTCAA 1174 28 100.0 32 ............................ TACATGCGTCTATATCACGATGGTATTTGAAT 1114 28 100.0 32 ............................ AAGTAAAGGTTTGACCATTTCTGGTAAATAAT 1054 28 100.0 32 ............................ TTCCGGCACCAAAACAAACCCATCTGGCACCG 994 28 100.0 32 ............................ AATTGGCTGGTCATGTTCTGATAGTTCAGGAT 934 28 100.0 32 ............................ AACACATAAGGCATGTGCTTTGGAATAAGTTC 874 28 100.0 32 ............................ TGAAGAATGGCTGCTGCCTTGAACCAACTGAC 814 28 100.0 32 ............................ TACAGCTGACCGTGTTACGGTTCAATCCGCTG 754 28 100.0 32 ............................ GTTCCCGCTGGGTATGTTTTAGTGCCAAAAGA 694 28 100.0 32 ............................ ACGGAATCATGGACATCGAAACACTTGATGGT 634 28 100.0 32 ............................ AAAATTACGCGCATAGCCTTTCATACTTCCAG 574 28 100.0 32 ............................ CGCAGCAGTAACTACAACTCCAGCAAATGCAT 514 28 100.0 32 ............................ TAAAAACATTCATTGTTGCTTTTGATAAAAAA 454 28 100.0 32 ............................ TAGTCGTGGCAATGGGATATTTCAAGTAAGTC 394 28 100.0 32 ............................ TACGCAACTCGGCGTGTTGGGGTTTGCTGTTT 334 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 16 28 100.0 32 GTTTGCCATCGCCCAGATGGTTTAGAAG # Left flank : CGCAGAGATCTAGAGTCCGGTAATAGGTTGAGGGTGCGATCGGTAAAATTCTACAAATCGCCTCGACTCCGTACAGCTCTTTATTATTATGGATAAAATCCACCATTATTTGTGTGGGCGGTCGAGCTCCGCCTGGGCGAAAAAAGCGGCTGCTTTACGTAGAATTTCATTGGCACGTTTTAATTCTTTAATTTCACGTTCCATTTGCTTCATTTTTTCTTGGTCAGATATCTGTTGTACTTTGGCAGGATTTAGTTGATCCATATGCTTTAAATACCAAACACGCAATGTTTCAGGAGTACAACCGATTTTAGGCGCAATAGCTGTGATTGCTGCCCAAGTAGAAGGATAATCTTTTTCAGATTCAATTAGTAATTGAACCGCTCTTTCTCTAATTTCGGGGGTATAGTTTGGTTTTTTCATCGGAATAGTCTCTCAGAATATTGAGTCTCCGACAAACCCGGTACGGTTCACTAAGCCCTCAACTTCCCCTTCACTCA # Right flank : GATGTCGCCTTGTACTAGCTCAAACCTGATCTGACAGTTACCCATTTTTTATTGTGCCTGTCAGGTTAAATTTGAGCTAAATTTTTCTCAGCCCAAATCCGTTTTCCATCAAGTAAAGTTTCAAGTGGTGTACGACCACAGCACATTTTTCCTTGATGAGTCCGTTCAGTATTATAGAATTTCAGCCAATCGTCTAGATCAACTTGTAATTCTTCCAATGAGCTATAAAGCTTCTTCCTAAACGTAATTTGATAGAACTCCTGCAAAATCGTCTTATGGAAACGCTCACATATACCATTTGTTTGCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCCATCGCCCAGATGGTTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTGCCATCGCCCAGATGGTTTAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 7283-2873 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKQS01000010.1 Acinetobacter towneri strain 5-2Ac02 Scaffold45.1_new, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 7282 28 100.0 32 ............................ ATCACCTACGTTAGTGCTGTTGTGTAGACCTA 7222 28 100.0 32 ............................ TCTAATTGCAAGTAAGCATTTAGAGTTAGTTT 7162 28 100.0 32 ............................ TGACTACACGCACATCGAAAAAGATGGTACGC 7102 28 100.0 32 ............................ AAAGCGGTGGAAGAACTCGATTTTGAAACCAT 7042 28 100.0 32 ............................ AAAAACAAGCATCATCGCTATAGCAATTATCA 6982 28 100.0 32 ............................ TTGCAGGTTTGAACTTACCTGAAGCCGATAAG 6922 28 100.0 32 ............................ TGAATATCGTGCGACACGTGCGGCATTGCTGC 6862 28 100.0 32 ............................ TCTATGTTCTACTGCATGAATACTCTCTGGCT 6802 28 100.0 32 ............................ TGTAGCTTCTGCTGCAGAATCCCCTTGTTCAC 6742 28 100.0 32 ............................ CTGTCGCCTGCGCCGTTCATGTCAAAGCTTAA 6682 28 100.0 32 ............................ AAATCTATAGAGCAGAGATTTATTTTCCCAGC 6622 28 100.0 32 ............................ ATTGCAAGCCTGGAATAATCACAAGCAATAAA 6562 28 100.0 32 ............................ ATTTATCCAGGCATCTTCACGTGCATTACGAT 6502 28 100.0 32 ............................ TTCGCCATGAGGCAGCAACACGTTTGGCAGAG 6442 28 100.0 32 ............................ GTTTTGATGGTAGGGTCGGCAATACAGTGCTA 6382 28 100.0 32 ............................ GAATCCACAGACGGCGCAGCAGAACGCTTCAA 6322 28 100.0 32 ............................ GTTATAGGATGTTCGGCGCAGGCAGGGTTTTC 6262 28 100.0 32 ............................ TTTGCATGGAGCCAGCAGTAAAAGCGCATTGC 6202 28 100.0 32 ............................ AATGGTGCTTCATTAATAACTTGTTCTGGCGT 6142 28 100.0 32 ............................ ATATTTAATAGAGCAGCTAACTAATAAAATTA 6082 28 100.0 32 ............................ AACAAGGCCCAAGGTGGCATAGACGATATGAG 6022 28 100.0 33 ............................ TTTATCAACAGCAATCTGCGCCAAACGCTGCAT 5961 28 100.0 32 ............................ TCAAACAAAGTGTCATCCATGCCATACGGCTT 5901 28 100.0 32 ............................ TTACAGCAGTGATTCAGGGGCAAGGCGCTATT 5841 28 100.0 32 ............................ ATTCAACATGATTGAGATTGACCAACTGCCGC 5781 28 100.0 32 ............................ ATCAATAATTCAGGTGCATAAACACGGCCAAA 5721 28 100.0 32 ............................ TTGAATACATGAACCGCATTATCCTCAGCTGC 5661 28 100.0 32 ............................ ATGATGGAAATGGCAGGCGGTGCAGTAGCTAA 5601 28 100.0 32 ............................ TATGCTGTTTTTCGGCAATCCCMACTCGTTTA 5541 28 100.0 32 ............................ AAAACATTCGCCGTATCAATCAATTCAAGATA 5481 28 100.0 32 ............................ ACTGAGCGCATAAGCATCAATAGATAGAAAAA 5421 28 100.0 32 ............................ AAAATCGCAGATAAAACTTTAATTAATGCTAG 5361 28 100.0 32 ............................ TTCGATATTCTGCGATGCACTGACCGGATATG 5301 28 100.0 32 ............................ TAACTAGGGAGGTTTTCTTTATCGTCTAGAAT 5241 28 100.0 32 ............................ TGTATTGATTGGCAACAACTCAACAAGTCGTC 5181 28 100.0 32 ............................ AATCATGGCATCCAAGTCCCGAAGTCCTGTAT 5121 28 100.0 32 ............................ ATAAGCGCCTTTTGTCCTAAAGTTAGGAATAT 5061 28 100.0 32 ............................ ACCGCTACACGCTGAGCATCTGTTAGCGAATA 5001 28 100.0 32 ............................ TTGATCTCTACAACATCGAGACGATCAATGTA 4941 28 100.0 32 ............................ TAGAACTTGACCAGTGATCCCAATCTGACAAA 4881 28 96.4 32 ..A......................... ATTGCTGTTTGCCTGCGACTGCTAACTTTTCA 4821 28 100.0 32 ............................ AATTTGCTCCTGTAAAAATCTAGTACCCACAT 4761 28 100.0 32 ............................ ACCAAGCCGTGACCGTTGGAAAGAACGCTCCA 4701 28 100.0 32 ............................ CCAACGGCACTAAACCATATCTTGTTCGGGGC 4641 28 100.0 32 ............................ TTACGCATGGTCGCGTGATTATGAGATAACGC 4581 28 100.0 32 ............................ AGTATTTCAGGCTTTGATGAAATAATCATTTT 4521 28 100.0 32 ............................ TGTTGGTTTTCGATGAACTCTTTACGCTGTTT 4461 28 100.0 32 ............................ AAAAGCAGAGTATTCAGTAATGAAATCATGCT 4401 28 100.0 32 ............................ ATTTGCACACACCGCTATCACACTTCGTATGG 4341 28 100.0 33 ............................ CACAATCACAAAGTATGAATTACAAAAATTTGT 4280 28 100.0 32 ............................ TTCGCTACTGTGAAACCAAGACAGGTGAAGTG 4220 28 100.0 32 ............................ TTAACCTCAGTTGCTCTATAAAGATATTCACC 4160 28 100.0 32 ............................ CATTGTTCAGGATCTTCGGCTTTAGCCTTAAT 4100 28 100.0 32 ............................ ACTGTGGCAACTGCAGCAGCCATAGCTACAAT 4040 28 100.0 32 ............................ ACCATGGCATAAAGCAAAAATTTTACCATCCT 3980 28 100.0 32 ............................ TACAATCAATGCAATTCTTGAACAAATCACGC 3920 28 100.0 32 ............................ TTGGGTTTATCGTTTGAAGTTGTTGCGATTGA 3860 28 100.0 32 ............................ TTGTGGCAGGCATACCGCTATAAATATCCGGA 3800 28 100.0 32 ............................ TTCAACACAACCGAATTGAACTGAATAAGACT 3740 28 100.0 32 ............................ ATCACCGCCCACAGCATTTTTAATTTCAAATT 3680 28 100.0 32 ............................ AAAAGATCGGTAAAGTTGATTATTCAGAATTG 3620 28 100.0 32 ............................ GATATTTACGGAACTGCCCAAACCAAAAACCT 3560 28 100.0 32 ............................ AATCATTAGCAACTGTTCTAAACACCTTTTTC 3500 28 100.0 32 ............................ TACATCTATGCGGATCCTGGTCTTGGTAAAAC 3440 28 100.0 32 ............................ TGAAAAGCCTAAACGTGGCAGTAAGCCAAGCA 3380 28 100.0 32 ............................ TAAACCGGTTGGATCGGTTGGTGTACGTTCAC 3320 28 100.0 32 ............................ TTTGGTGACGCTATCTATGATTTAGATGGAAT 3260 28 100.0 32 ............................ TTGACATCAAAAGCAGCATCACTTGCTGAAAT 3200 28 100.0 32 ............................ ACCAAACAAACAGAAAAGACAAAATTATTAGG 3140 28 100.0 32 ............................ TACGGGGTGAGTTGAAACATACCAATCACCAT 3080 28 100.0 32 ............................ CGTTTGGCGATGAAAATGCTTGGTGGTTATTA 3020 28 100.0 32 ............................ ACTGGTGTTGAAGATGGCAGCCTATTTTGGTC 2960 28 100.0 32 ............................ CAAACTTCTGACACATCGATTGTGCCAAAAAG 2900 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 74 28 100.0 32 GTTTGCCATCGCCCAGATGGTTTAGAAG # Left flank : GCCGTTGGGCAAAAAGTCTCTATAAACAACTTGCATCGGGTTTAAATTTTGAATTTAGCCGTGAGGAAGGAAAAGGGTCGCATGAGTCCTTACGTGATATTGCCAATAGTTATCTAGATCATGGTAATTACATTGCTTATGGTTATGCTTCTGTCACACTAAATGGTATGGGAATAAGTTTTGCCTTACCTATTTTGCACGGTAAGACACGTCGTGGTGGTTTAGTTTTCGATATTGCAGATTTAGTAAAAGATGCTTTTGTTATGCCACAAGCGTTTATTTCTGCCAAAAATGGACATAATCAAAAAGAGTTTAGAATGCAACTGATTGAATCCTGCCAAGATCAGGATGTCTTAGACTATATGTTTAACTTCATTTCTGAGCTATGCAATAAAATCAAATGATTTCAAAAGTTTATTGATTTTTGTTTTTTTGATCTATTTTCACTCTTTAAAAACCTATATCATTATTATCTAGAGCTTTTTATGATAAAAGTTCTA # Right flank : ATTTGCTATGAACCGTACCGGGTTTGTCGGAGACTTTTTTATTTAAGTTAGGCCACCTGACCTAACGGGTTAATCTTATCATAGTACATTGCTTCAAACTCAAAAGGCGATACATAACCCAGTGCACTGTGTACACGCTTTTTATTGAACCAATCTACCCAGTTTAGTGTCGCAAGTTGTACATCTGCTAAACCTTGCCAATCTGCTTTTAAATATTCAATCACCTCTGTTTTGTATAAGCCATTCACCGTTTCAGCCAAAGCATTATCGTATGAATCACCAGTCGTACCGACTGATGCTCGTAANCCGTACCGGGTTTGTCGGAGACTTTTTTATTTAAGTTAGGCCACCTGACCTAACGGGTTAATCTTATCATAGTACATTGCTTCAAACTCAAAAGGCGATACATAACCCAGTGCACTGTGTACACGCTTTTTATTGAACCAATCTACCCAGTTTAGTGTCGCAAGTTGTACATCTGCTAAACCTTGCCAATCTGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCCATCGCCCAGATGGTTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTGCCATCGCCCAGATGGTTTAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [58.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //